RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 RPS12P25398 132 aaKnown RBP14.62□□□□□ -0.07
DDB1-209ENST00000537877 EIF6P56537 245 aaKnown RBP14.62□□□□□ -0.07
DDB1-209ENST00000537877 ANKRD1Q15327 319 aa14.62□□□□□ -0.07
DDB1-209ENST00000537877 AKNAD1Q5T1N1 836 aa14.62□□□□□ -0.07
DDB1-209ENST00000537877 APOBEC3HQ6NTF7 200 aaKnown RBP14.62□□□□□ -0.07
DDB1-209ENST00000537877 CTR9Q6PD62 1173 aa14.62□□□□□ -0.07
DDB1-209ENST00000537877 DHX32Q7L7V1 743 aaKnown RBP14.62□□□□□ -0.07
DDB1-209ENST00000537877 TGFBRAP1Q8WUH2 860 aa14.62□□□□□ -0.07
DDB1-209ENST00000537877 SBF1O95248 1867 aa14.62□□□□□ -0.07
DDB1-209ENST00000537877 FLT1P17948 1338 aa14.62□□□□□ -0.07
DDB1-209ENST00000537877 USP17L12C9JPN9 530 aa14.61□□□□□ -0.07
DDB1-209ENST00000537877 USP17L21D6R901 530 aa14.61□□□□□ -0.07
DDB1-209ENST00000537877 SLC3A2P08195 630 aaKnown RBP14.61□□□□□ -0.07
DDB1-209ENST00000537877 CPA1P15085 419 aa14.61□□□□□ -0.07
DDB1-209ENST00000537877 NT5C2P49902 561 aa14.61□□□□□ -0.07
DDB1-209ENST00000537877 PRELPP51888 382 aa14.61□□□□□ -0.07
DDB1-209ENST00000537877 AK2P54819 239 aa14.61□□□□□ -0.07
DDB1-209ENST00000537877 MB21D2Q8IYB1 491 aaPredicted RBP14.61□□□□□ -0.07
DDB1-209ENST00000537877 OGFOD1Q8N543 542 aa14.61□□□□□ -0.07
DDB1-209ENST00000537877 KRT23Q9C075 422 aa14.61□□□□□ -0.07
DDB1-209ENST00000537877 MCM9Q9NXL9 1143 aa14.61□□□□□ -0.07
DDB1-209ENST00000537877 MYH1P12882 1939 aa14.61□□□□□ -0.07
DDB1-209ENST00000537877 MINDY4BA8MYZ0 360 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 MCM5P33992 734 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 RBM5P52756 815 aaKnown RBP eCLIP14.6□□□□□ -0.07
DDB1-209ENST00000537877 CTDSPL2Q05D32 466 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 CFAP100Q494V2 611 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 CDC42EP5Q6NZY7 148 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 MFSD6Q6ZSS7 791 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 USP40Q9NVE5 1235 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 NEDD4P46934 1319 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
DDB1-209ENST00000537877 WDHD1O75717 1129 aaPredicted RBP14.6□□□□□ -0.07
DDB1-209ENST00000537877 USP17L8P0C7I0 530 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 YBX3P16989 372 aaKnown RBP eCLIP14.6□□□□□ -0.078e-12■□□□□ 9.5
DDB1-209ENST00000537877 EXOSC10Q01780 885 aaKnown RBP14.6□□□□□ -0.07
DDB1-209ENST00000537877 C12orf60Q5U649 245 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 MAPKAPK5Q8IW41 473 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 FBXL16Q8N461 479 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 MTMR14Q8NCE2 650 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 AGXT2Q9BYV1 514 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 LIMCH1Q9UPQ0 1083 aa14.6□□□□□ -0.07
DDB1-209ENST00000537877 ZBTB12Q9Y330 459 aaPredicted RBP14.6□□□□□ -0.07
DDB1-209ENST00000537877 COL2A1P02458 1487 aaPredicted RBP14.59□□□□□ -0.07
DDB1-209ENST00000537877 SPDYE2BA6NHP3 402 aa14.59□□□□□ -0.07
DDB1-209ENST00000537877 FGRP09769 529 aa14.59□□□□□ -0.07
DDB1-209ENST00000537877 SPDYE6P0CI01 402 aa14.59□□□□□ -0.07
DDB1-209ENST00000537877 SLC4A3P48751 1232 aa14.59□□□□□ -0.07
DDB1-209ENST00000537877 COL9A3Q14050 684 aaPredicted RBP14.59□□□□□ -0.07
DDB1-209ENST00000537877 DPF2Q92785 391 aa14.59□□□□□ -0.07
DDB1-209ENST00000537877 ZSCAN31Q96LW9 406 aaPredicted RBP14.59□□□□□ -0.07
DDB1-209ENST00000537877 MTA3Q9BTC8 594 aa14.59□□□□□ -0.07
DDB1-209ENST00000537877 IDI2Q9BXS1 227 aa14.59□□□□□ -0.07
DDB1-209ENST00000537877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.59□□□□□ -0.07
DDB1-209ENST00000537877 CYP2D7A0A087X1C5 515 aa14.58□□□□□ -0.08
DDB1-209ENST00000537877 B4E1Z4 1266 aa14.58□□□□□ -0.08
DDB1-209ENST00000537877 PRC1O43663 620 aa14.58□□□□□ -0.08
DDB1-209ENST00000537877 ORC4O43929 436 aa14.58□□□□□ -0.08
DDB1-209ENST00000537877 POLR3DP05423 398 aaPredicted RBP14.58□□□□□ -0.08
DDB1-209ENST00000537877 FGD1P98174 961 aa14.58□□□□□ -0.08
DDB1-209ENST00000537877 PDE4BQ07343 736 aa14.58□□□□□ -0.08
DDB1-209ENST00000537877 TOB2Q14106 344 aaPredicted RBP14.58□□□□□ -0.08
DDB1-209ENST00000537877 DLGAP5Q15398 846 aa14.58□□□□□ -0.08
DDB1-209ENST00000537877 Q6ZUG5 572 aa14.58□□□□□ -0.08
DDB1-209ENST00000537877 ESR2Q92731 530 aa14.58□□□□□ -0.08
DDB1-209ENST00000537877 TMX3Q96JJ7 454 aa14.58□□□□□ -0.08
DDB1-209ENST00000537877 SH2B1Q9NRF2 756 aaPredicted RBP14.58□□□□□ -0.08
DDB1-209ENST00000537877 TMOD2Q9NZR1 351 aa14.58□□□□□ -0.08
DDB1-209ENST00000537877 ZNF541Q9H0D2 1346 aa14.57□□□□□ -0.08
DDB1-209ENST00000537877 HSP90AA1P07900 732 aaKnown RBP14.57□□□□□ -0.08
DDB1-209ENST00000537877 CYP2D6P10635 497 aa14.57□□□□□ -0.08
DDB1-209ENST00000537877 ANTXR2P58335 489 aa14.57□□□□□ -0.08
DDB1-209ENST00000537877 ZNF280AP59817 542 aaPredicted RBP14.57□□□□□ -0.08
DDB1-209ENST00000537877 NOL8Q76FK4 1167 aaKnown RBP14.57□□□□□ -0.08
DDB1-209ENST00000537877 TTC6Q86TZ1 520 aa14.57□□□□□ -0.08
DDB1-209ENST00000537877 TMEM87BQ96K49 555 aa14.57□□□□□ -0.08
DDB1-209ENST00000537877 TCEANC2Q96MN5 208 aa14.57□□□□□ -0.08
DDB1-209ENST00000537877 OSBPL5Q9H0X9 879 aaPredicted RBP14.57□□□□□ -0.08
DDB1-209ENST00000537877 ZNF287Q9HBT7 754 aa14.57□□□□□ -0.08
DDB1-209ENST00000537877 DDX4Q9NQI0 724 aaKnown RBP14.57□□□□□ -0.08
DDB1-209ENST00000537877 TOMM22Q9NS69 142 aa14.57□□□□□ -0.08
DDB1-209ENST00000537877 TAOK2Q9UL54 1235 aa14.57□□□□□ -0.08
DDB1-209ENST00000537877 TACC3Q9Y6A5 838 aa14.57□□□□□ -0.08
DDB1-209ENST00000537877 KDM4AO75164 1064 aa14.56□□□□□ -0.08
DDB1-209ENST00000537877 GMPSP49915 693 aaPredicted RBP14.56□□□□□ -0.08
DDB1-209ENST00000537877 PICALMQ13492 652 aa14.56□□□□□ -0.08
DDB1-209ENST00000537877 CUL4AQ13619 759 aa14.56□□□□□ -0.08
DDB1-209ENST00000537877 ZBED3Q96IU2 234 aaPredicted RBP14.56□□□□□ -0.08
DDB1-209ENST00000537877 DHX36Q9H2U1 1008 aaKnown RBP14.56□□□□□ -0.08
DDB1-209ENST00000537877 SAP30BPQ9UHR5 308 aaKnown RBP14.56□□□□□ -0.08
DDB1-209ENST00000537877 PCDHAC2Q9Y5I4 1007 aa14.56□□□□□ -0.08
DDB1-209ENST00000537877 ENTPD3O75355 529 aa14.55□□□□□ -0.08
DDB1-209ENST00000537877 SART3Q15020 963 aaKnown RBP14.55□□□□□ -0.08
DDB1-209ENST00000537877 SPDYE2Q495Y8 402 aa14.55□□□□□ -0.08
DDB1-209ENST00000537877 RRP12Q5JTH9 1297 aaKnown RBP14.55□□□□□ -0.08
DDB1-209ENST00000537877 FKBP1CQ5VVH2 108 aa14.55□□□□□ -0.08
DDB1-209ENST00000537877 C16orf86Q6ZW13 317 aa14.55□□□□□ -0.08
DDB1-209ENST00000537877 CYB5R4Q7L1T6 521 aa14.55□□□□□ -0.08
DDB1-209ENST00000537877 GPC2Q8N158 579 aa14.55□□□□□ -0.08
DDB1-209ENST00000537877 BRF1Q92994 677 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms