RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ZFXP17010 805 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 NCBP1Q09161 790 aaKnown RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 ATP2B3Q16720 1220 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 ANKRD42Q8N9B4 389 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 SH3GL3Q99963 347 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 BICC1Q9H694 974 aaKnown RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 MGEA5O60502 916 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 HSP90AA5PQ58FG0 334 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 MCM10Q7L590 875 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 MRPL46Q9H2W6 279 aaKnown RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 INTUQ9ULD6 942 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 ACTN4O43707 911 aaKnown RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 IWS1Q96ST2 819 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 ACTN3Q08043 901 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 SEL1L2Q5TEA6 688 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 ZBTB43O43298 467 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 IRX4P78413 519 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 METTL24Q5JXM2 366 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 ZC3H18Q86VM9 953 aaKnown RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 HAUS1Q96CS2 278 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 ARHGAP5Q13017 1502 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 TDRD9Q8NDG6 1382 aaKnown RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 PLEKHO1Q53GL0 409 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 TMTC1Q8IUR5 882 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 YIPF3Q9GZM5 350 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 SYNJ1O43426 1573 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 KDM5AP29375 1690 aaKnown RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 PDE1AP54750 535 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 LONRF2Q1L5Z9 754 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 CFAP61Q8NHU2 1237 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 TXLNGQ9NUQ3 528 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 PCF11O94913 1555 aaKnown RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 TRIM75PA6NK02 468 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 GPIHBP1Q8IV16 184 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 FAM212AQ96EL1 285 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 DNAI2Q9GZS0 605 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 NLRP12P59046 1061 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 CFAP221Q4G0U5 840 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 GPT2Q8TD30 523 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 POLR1AO95602 1720 aaPredicted RBP6.3□□□□□ -1.4
CSMD1-215ENST00000537824 MAP3K7O43318 606 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 SERPINB6P35237 376 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 TNIP1Q15025 636 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 DYDC2Q96IM9 177 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 ASXL1Q8IXJ9 1541 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 TP53BP1Q12888 1972 aaPredicted RBP6.3□□□□□ -1.4
CSMD1-215ENST00000537824 GYS2P54840 703 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 RAPGEF1Q13905 1077 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 KLHL14Q9P2G3 628 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 CRCPO75575 148 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 KCTD16Q68DU8 428 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 CEP70Q8NHQ1 597 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 ENO4A6NNW6 628 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 CHUKO15111 745 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 ERMNQ8TAM6 284 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 MYCNP04198 464 aaPredicted RBP6.3□□□□□ -1.4
CSMD1-215ENST00000537824 TRIM14Q14142 442 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 NUB1Q9Y5A7 615 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 TACC3Q9Y6A5 838 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 BMP15O95972 392 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 SATB1Q01826 763 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 DYNC1I2Q13409 638 aaKnown RBP6.3□□□□□ -1.4
CSMD1-215ENST00000537824 ATP6V0A2Q9Y487 856 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 SAR1BQ9Y6B6 198 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 STX2P32856 288 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 PHEXP78562 749 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 PPP1R42Q7Z4L9 355 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.3□□□□□ -1.4
CSMD1-215ENST00000537824 RASSF10A6NK89 507 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 PIP4K2CQ8TBX8 421 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 NEK1Q96PY6 1258 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 ASIC3Q9UHC3 531 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 SLC4A7Q9Y6M7 1214 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 ANKRD65E5RJM6 399 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 APOBRQ0VD83 1088 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 INF2Q27J81 1249 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 BRAPQ7Z569 592 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 DACT3Q96B18 629 aaPredicted RBP6.3□□□□□ -1.4
CSMD1-215ENST00000537824 FGD4Q96M96 766 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 TRIM66O15016 1216 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 SKIP12755 728 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 POLD1P28340 1107 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 PCYT1AP49585 367 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 PFDN4Q9NQP4 134 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 SATB2Q9UPW6 733 aa6.3□□□□□ -1.4
CSMD1-215ENST00000537824 ST13P4Q8IZP2 240 aaPredicted RBP6.29□□□□□ -1.4
CSMD1-215ENST00000537824 ATG3Q9NT62 314 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 TXNDC16Q9P2K2 825 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 KIF1BO60333 1816 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 DOCK9Q9BZ29 2069 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 SPOPO43791 374 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 AK2P54819 239 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 ETF1P62495 437 aaKnown RBP6.29□□□□□ -1.4
CSMD1-215ENST00000537824 UBL4BQ8N7F7 174 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 SPTBN1Q01082 2364 aaKnown RBP6.29□□□□□ -1.4
CSMD1-215ENST00000537824 IFIH1Q9BYX4 1025 aaKnown RBP6.29□□□□□ -1.4
CSMD1-215ENST00000537824 ABCF2Q9UG63 623 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 VPS16Q9H269 839 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 FRMD4BQ9Y2L6 1034 aa6.29□□□□□ -1.4
CSMD1-215ENST00000537824 CFAP70Q5T0N1 1121 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms