RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 NLRP3Q96P20 1036 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 ALG1Q9BT22 464 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 RTCBQ9Y3I0 505 aaKnown RBP10.84□□□□□ -0.67
UBE3B-207ENST00000537063 CLIC4Q9Y696 253 aa10.84□□□□□ -0.67
UBE3B-207ENST00000537063 IFIT3O14879 490 aaKnown RBP10.83□□□□□ -0.68
UBE3B-207ENST00000537063 ZPR1O75312 459 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 OFD1O75665 1012 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 PCP11498 1178 aaKnown RBP10.83□□□□□ -0.68
UBE3B-207ENST00000537063 SEC23AQ15436 765 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 CPLX2Q6PUV4 134 aaKnown RBP10.83□□□□□ -0.68
UBE3B-207ENST00000537063 MRPS27Q92552 414 aaKnown RBP10.83□□□□□ -0.68
UBE3B-207ENST00000537063 ARHGEF1Q92888 912 aaKnown RBP10.83□□□□□ -0.68
UBE3B-207ENST00000537063 GJB4Q9NTQ9 266 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 LTBP1Q14766 1721 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 DDX60LQ5H9U9 1706 aaKnown RBP10.83□□□□□ -0.68
UBE3B-207ENST00000537063 KRT40Q6A162 431 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 TPTE2Q6XPS3 522 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 BICDL1Q6ZP65 573 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 CCDC73Q6ZRK6 1079 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 MICU3Q86XE3 530 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 SLC12A7Q9Y666 1083 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.83□□□□□ -0.68
UBE3B-207ENST00000537063 KLRK1P26718 216 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 AXDND1Q5T1B0 1012 aaPredicted RBP10.83□□□□□ -0.68
UBE3B-207ENST00000537063 NBPF11Q86T75 865 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 TMTC2Q8N394 836 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 NSUN4Q96CB9 384 aaKnown RBP10.83□□□□□ -0.68
UBE3B-207ENST00000537063 GJD4Q96KN9 370 aaPredicted RBP10.83□□□□□ -0.68
UBE3B-207ENST00000537063 AIFM3Q96NN9 605 aa10.83□□□□□ -0.68
UBE3B-207ENST00000537063 ME1P48163 572 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 ANO1Q5XXA6 986 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 FSIP1Q8NA03 581 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 RAI14Q9P0K7 980 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 IQSEC3Q9UPP2 1182 aaPredicted RBP10.82□□□□□ -0.68
UBE3B-207ENST00000537063 CDK5RAP2Q96SN8 1893 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 FAM237AA0A1B0GTK4 181 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 CCDC69A6NI79 296 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 RXRAP19793 462 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 IARSP41252 1262 aaKnown RBP10.82□□□□□ -0.68
UBE3B-207ENST00000537063 SART3Q15020 963 aaKnown RBP10.82□□□□□ -0.68
UBE3B-207ENST00000537063 SASS6Q6UVJ0 657 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 NFXL1Q6ZNB6 911 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 VPS37DQ86XT2 251 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 MAP3K14Q99558 947 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 SPTLC2O15270 562 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 SLC39A14Q15043 492 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 PTPAQ15257 358 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 LUZP1Q86V48 1076 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 PHKBQ93100 1093 aa10.82□□□□□ -0.68
UBE3B-207ENST00000537063 NAV1Q8NEY1 1877 aa10.81□□□□□ -0.68
UBE3B-207ENST00000537063 PPP6R2O75170 966 aa10.81□□□□□ -0.68
UBE3B-207ENST00000537063 POLR3DP05423 398 aaPredicted RBP10.81□□□□□ -0.68
UBE3B-207ENST00000537063 ADRA2BP18089 450 aa10.81□□□□□ -0.68
UBE3B-207ENST00000537063 WTAPQ15007 396 aa10.81□□□□□ -0.68
UBE3B-207ENST00000537063 IQCB1Q15051 598 aa10.81□□□□□ -0.68
UBE3B-207ENST00000537063 STX1AQ16623 288 aa10.81□□□□□ -0.68
UBE3B-207ENST00000537063 SDR42E1Q8WUS8 393 aa10.81□□□□□ -0.68
UBE3B-207ENST00000537063 MYL10Q9BUA6 226 aa10.81□□□□□ -0.68
UBE3B-207ENST00000537063 ABCF2Q9UG63 623 aa10.81□□□□□ -0.68
UBE3B-207ENST00000537063 GTF2E1P29083 439 aaPredicted RBP10.81□□□□□ -0.68
UBE3B-207ENST00000537063 PPP2R5BQ15173 497 aa10.81□□□□□ -0.68
UBE3B-207ENST00000537063 STK38Q15208 465 aa10.81□□□□□ -0.68
UBE3B-207ENST00000537063 C15orf52Q6ZUT6 534 aaKnown RBP10.81□□□□□ -0.68
UBE3B-207ENST00000537063 PLA2G4DQ86XP0 818 aa10.81□□□□□ -0.68
UBE3B-207ENST00000537063 WASF1Q92558 559 aa10.81□□□□□ -0.68
UBE3B-207ENST00000537063 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.81□□□□□ -0.68
UBE3B-207ENST00000537063 KINO60870 393 aaKnown RBP10.81□□□□□ -0.68
UBE3B-207ENST00000537063 CMA1P23946 247 aa10.81□□□□□ -0.68
UBE3B-207ENST00000537063 HIBADHP31937 336 aaKnown RBP10.81□□□□□ -0.68
UBE3B-207ENST00000537063 SSRP1Q08945 709 aaKnown RBP10.81□□□□□ -0.68
UBE3B-207ENST00000537063 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.81□□□□□ -0.68
UBE3B-207ENST00000537063 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.81□□□□□ -0.68
UBE3B-207ENST00000537063 BRWD3Q6RI45 1802 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 MROH7-TTC4A0A0A0MT08 1334 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 NDUFA8P51970 172 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 MECOMQ03112 1051 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 RTN1Q16799 776 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 SARM1Q6SZW1 724 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 ESR2Q92731 530 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 DNAJC25Q9H1X3 360 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 ORC4O43929 436 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 TPM3P06753 285 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 ZNF165P49910 485 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 TERF1P54274 439 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 DYNLL1P63167 89 aaKnown RBP10.8□□□□□ -0.68
UBE3B-207ENST00000537063 CTR9Q6PD62 1173 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.8□□□□□ -0.68
UBE3B-207ENST00000537063 ZNF654Q8IZM8 581 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.8□□□□□ -0.68
UBE3B-207ENST00000537063 HPSEQ9Y251 543 aa10.8□□□□□ -0.68
UBE3B-207ENST00000537063 MORC2Q9Y6X9 1032 aaPredicted RBP10.8□□□□□ -0.68
UBE3B-207ENST00000537063 MMP1P03956 469 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 PTMAP06454 111 aaKnown RBP10.79□□□□□ -0.68
UBE3B-207ENST00000537063 CDC25BP30305 580 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 SYNE3Q6ZMZ3 975 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 C11orf57Q6ZUT1 292 aaPredicted RBP10.79□□□□□ -0.68
UBE3B-207ENST00000537063 CCDC144CPQ8IYA2 1237 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 CRACR2BQ8N4Y2 399 aaPredicted RBP10.79□□□□□ -0.68
UBE3B-207ENST00000537063 CERKQ8TCT0 537 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 BCL11BQ9C0K0 894 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms