RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 ZSCAN22P10073 491 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 PDIA4P13667 645 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 ALDH8A1Q9H2A2 487 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 PDRG1Q9NUG6 133 aa15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 TTF2Q9UNY4 1162 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 USP17L3A6NCW0 530 aa15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 USP17L4A6NCW7 530 aa15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 EVX2Q03828 476 aa15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 STRIP1Q5VSL9 837 aa15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 USP17L1Q7RTZ2 530 aa15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 SH3RF3Q8TEJ3 882 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 JAKMIP1Q96N16 626 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 NBPF3Q9H094 633 aa15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 DAGLAQ9Y4D2 1042 aa15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 CYP46A1Q9Y6A2 500 aa15.25■□□□□ 0.03
CDK5RAP3-202ENST00000536708 STX6O43752 255 aa15.24■□□□□ 0.03
CDK5RAP3-202ENST00000536708 YBX3P16989 372 aaKnown RBP eCLIP15.24■□□□□ 0.03
CDK5RAP3-202ENST00000536708 ZKSCAN1P17029 563 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-202ENST00000536708 BTDP43251 543 aa15.24■□□□□ 0.03
CDK5RAP3-202ENST00000536708 NIM1KQ8IY84 436 aa15.24■□□□□ 0.03
CDK5RAP3-202ENST00000536708 SMC3Q9UQE7 1217 aa15.24■□□□□ 0.03
CDK5RAP3-202ENST00000536708 PSMD14O00487 310 aa15.24■□□□□ 0.03
CDK5RAP3-202ENST00000536708 SYT1P21579 422 aa15.24■□□□□ 0.03
CDK5RAP3-202ENST00000536708 SLC4A8Q2Y0W8 1093 aa15.24■□□□□ 0.03
CDK5RAP3-202ENST00000536708 TSGA10IPQ3SY00 556 aa15.24■□□□□ 0.03
CDK5RAP3-202ENST00000536708 USP48Q86UV5 1035 aa15.24■□□□□ 0.03
CDK5RAP3-202ENST00000536708 IFNL3Q8IZI9 196 aa15.24■□□□□ 0.03
CDK5RAP3-202ENST00000536708 TCEANC2Q96MN5 208 aa15.24■□□□□ 0.03
CDK5RAP3-202ENST00000536708 ATP6V1DQ9Y5K8 247 aa15.24■□□□□ 0.03
CDK5RAP3-202ENST00000536708 GAKO14976 1311 aa15.23■□□□□ 0.03
CDK5RAP3-202ENST00000536708 CYP2D7A0A087X1C5 515 aa15.23■□□□□ 0.03
CDK5RAP3-202ENST00000536708 SYCE3A1L190 88 aa15.23■□□□□ 0.03
CDK5RAP3-202ENST00000536708 PSMA5P28066 241 aa15.23■□□□□ 0.03
CDK5RAP3-202ENST00000536708 RNF20Q5VTR2 975 aa15.23■□□□□ 0.03
CDK5RAP3-202ENST00000536708 TBC1D10CQ8IV04 446 aa15.23■□□□□ 0.03
CDK5RAP3-202ENST00000536708 ZBTB12Q9Y330 459 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-202ENST00000536708 LTBP3Q9NS15 1303 aa15.23■□□□□ 0.03
CDK5RAP3-202ENST00000536708 TDO2P48775 406 aa15.22■□□□□ 0.03
CDK5RAP3-202ENST00000536708 GSTO1P78417 241 aa15.22■□□□□ 0.03
CDK5RAP3-202ENST00000536708 ZSCAN30Q86W11 494 aa15.22■□□□□ 0.03
CDK5RAP3-202ENST00000536708 NKX2-3Q8TAU0 364 aa15.22■□□□□ 0.03
CDK5RAP3-202ENST00000536708 NAPBQ9H115 298 aa15.22■□□□□ 0.03
CDK5RAP3-202ENST00000536708 PATL2C9JE40 543 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-202ENST00000536708 F13A1P00488 732 aa15.22■□□□□ 0.03
CDK5RAP3-202ENST00000536708 STK11IPQ8N1F8 1099 aa15.22■□□□□ 0.03
CDK5RAP3-202ENST00000536708 ZNRF3Q9ULT6 936 aa15.22■□□□□ 0.03
CDK5RAP3-202ENST00000536708 TACC3Q9Y6A5 838 aa15.22■□□□□ 0.03
CDK5RAP3-202ENST00000536708 LARGE1O95461 756 aa15.21■□□□□ 0.03
CDK5RAP3-202ENST00000536708 GNAT2P19087 354 aa15.21■□□□□ 0.03
CDK5RAP3-202ENST00000536708 CTDSPL2Q05D32 466 aa15.21■□□□□ 0.03
CDK5RAP3-202ENST00000536708 CXCL9Q07325 125 aa15.21■□□□□ 0.03
CDK5RAP3-202ENST00000536708 IMMTQ16891 758 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-202ENST00000536708 ARHGAP27Q6ZUM4 889 aa15.21■□□□□ 0.03
CDK5RAP3-202ENST00000536708 INCENPQ9NQS7 918 aa15.21■□□□□ 0.03
CDK5RAP3-202ENST00000536708 MYH8P13535 1937 aa15.21■□□□□ 0.03
CDK5RAP3-202ENST00000536708 ZMYM6O95789 1325 aa15.21■□□□□ 0.02
CDK5RAP3-202ENST00000536708 SIPA1L1O43166 1804 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 GPR75-ASB3A0A0A6YYF3 556 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 E7EWF7 191 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 GADD45BO75293 160 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 RHBDL3P58872 404 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 LARP6Q9BRS8 491 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 CRNKL1Q9BZJ0 848 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 DCP1AQ9NPI6 582 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 SUGT1Q9Y2Z0 365 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 NEDD4P46934 1319 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 SHTN1A0MZ66 631 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 LETM1O95202 739 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 CYP2D6P10635 497 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 CRKP46108 304 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 UBE2HP62256 183 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 ST3GAL1Q11201 340 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 ANKRD1Q15327 319 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 RSBN1LQ6PCB5 846 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 JDP2Q8WYK2 163 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 TSPY26PQ9H489 355 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 CTNNA3Q9UI47 895 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 MTMR6Q9Y217 621 aa15.2■□□□□ 0.02
CDK5RAP3-202ENST00000536708 ZNF541Q9H0D2 1346 aa15.19■□□□□ 0.02
CDK5RAP3-202ENST00000536708 SOCS7O14512 581 aa15.19■□□□□ 0.02
CDK5RAP3-202ENST00000536708 LDHCP07864 332 aa15.19■□□□□ 0.02
CDK5RAP3-202ENST00000536708 GJB2P29033 226 aa15.19■□□□□ 0.02
CDK5RAP3-202ENST00000536708 FKBP1AP62942 108 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-202ENST00000536708 ALX1Q15699 326 aa15.19■□□□□ 0.02
CDK5RAP3-202ENST00000536708 CSPP1Q1MSJ5 1256 aa15.19■□□□□ 0.02
CDK5RAP3-202ENST00000536708 MAPKAPK5Q8IW41 473 aa15.19■□□□□ 0.02
CDK5RAP3-202ENST00000536708 CCDC83Q8IWF9 413 aa15.19■□□□□ 0.02
CDK5RAP3-202ENST00000536708 TGFBRAP1Q8WUH2 860 aa15.19■□□□□ 0.02
CDK5RAP3-202ENST00000536708 TEKT1Q969V4 418 aa15.19■□□□□ 0.02
CDK5RAP3-202ENST00000536708 NOL10Q9BSC4 688 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-202ENST00000536708 NACAP1Q9BZK3 213 aa15.19■□□□□ 0.02
CDK5RAP3-202ENST00000536708 VPS33BQ9H267 617 aa15.19■□□□□ 0.02
CDK5RAP3-202ENST00000536708 ZNF213O14771 459 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 VIL1P09327 827 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 CACNB3P54284 484 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 PPP4CP60510 307 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 ME3Q16798 604 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 CHST3Q7LGC8 479 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 TEX11Q8IYF3 940 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 FAM163AQ96GL9 167 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms