RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 ANAPC4Q9UJX5 808 aa27.16■■□□□ 1.94
RBFOX1-206ENST00000535565 DDX60LQ5H9U9 1706 aaKnown RBP27.16■■□□□ 1.94
RBFOX1-206ENST00000535565 USP17L12C9JPN9 530 aa27.15■■□□□ 1.94
RBFOX1-206ENST00000535565 USP17L21D6R901 530 aa27.15■■□□□ 1.94
RBFOX1-206ENST00000535565 SBK1Q52WX2 424 aa27.15■■□□□ 1.94
RBFOX1-206ENST00000535565 APOBEC3HQ6NTF7 200 aaKnown RBP27.15■■□□□ 1.94
RBFOX1-206ENST00000535565 USP40Q9NVE5 1235 aa27.15■■□□□ 1.94
RBFOX1-206ENST00000535565 MKRN1Q9UHC7 482 aaKnown RBP27.15■■□□□ 1.94
RBFOX1-206ENST00000535565 ZBTB12Q9Y330 459 aaPredicted RBP27.15■■□□□ 1.94
RBFOX1-206ENST00000535565 CTDSPL2Q05D32 466 aa27.14■■□□□ 1.94
RBFOX1-206ENST00000535565 AKNAD1Q5T1N1 836 aa27.14■■□□□ 1.94
RBFOX1-206ENST00000535565 DHX32Q7L7V1 743 aaKnown RBP27.14■■□□□ 1.94
RBFOX1-206ENST00000535565 CNNM2Q9H8M5 875 aa27.14■■□□□ 1.94
RBFOX1-206ENST00000535565 SLC3A2P08195 630 aaKnown RBP27.14■■□□□ 1.93
RBFOX1-206ENST00000535565 USP17L8P0C7I0 530 aa27.14■■□□□ 1.93
RBFOX1-206ENST00000535565 YBX3P16989 372 aaKnown RBP eCLIP27.14■■□□□ 1.93
RBFOX1-206ENST00000535565 RPS12P25398 132 aaKnown RBP27.14■■□□□ 1.93
RBFOX1-206ENST00000535565 SLC4A3P48751 1232 aa27.14■■□□□ 1.93
RBFOX1-206ENST00000535565 CFAP100Q494V2 611 aa27.14■■□□□ 1.93
RBFOX1-206ENST00000535565 MFSD6Q6ZSS7 791 aa27.14■■□□□ 1.93
RBFOX1-206ENST00000535565 MAPKAPK5Q8IW41 473 aa27.14■■□□□ 1.93
RBFOX1-206ENST00000535565 STAG1Q8WVM7 1258 aa27.14■■□□□ 1.93
RBFOX1-206ENST00000535565 FLT1P17948 1338 aa27.13■■□□□ 1.93
RBFOX1-206ENST00000535565 MMP14P50281 582 aa27.13■■□□□ 1.93
RBFOX1-206ENST00000535565 AK2P54819 239 aa27.13■■□□□ 1.93
RBFOX1-206ENST00000535565 ANKRD1Q15327 319 aa27.13■■□□□ 1.93
RBFOX1-206ENST00000535565 CDC42EP5Q6NZY7 148 aa27.13■■□□□ 1.93
RBFOX1-206ENST00000535565 ALDH8A1Q9H2A2 487 aaPredicted RBP27.13■■□□□ 1.93
RBFOX1-206ENST00000535565 KRT23Q9C075 422 aa27.12■■□□□ 1.93
RBFOX1-206ENST00000535565 PCP11498 1178 aaKnown RBP27.11■■□□□ 1.93
RBFOX1-206ENST00000535565 MCM5P33992 734 aa27.11■■□□□ 1.93
RBFOX1-206ENST00000535565 CYP2D7A0A087X1C5 515 aa27.1■■□□□ 1.93
RBFOX1-206ENST00000535565 POLR3DP05423 398 aaPredicted RBP27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 FGD1P98174 961 aa27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 DLGAP5Q15398 846 aa27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 C12orf60Q5U649 245 aa27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 NOL8Q76FK4 1167 aaKnown RBP27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 MB21D2Q8IYB1 491 aaPredicted RBP27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 TCEANC2Q96MN5 208 aa27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 NEDD4P46934 1319 aa27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 WDR19Q8NEZ3 1342 aa27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 WDHD1O75717 1129 aaPredicted RBP27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 EXOSC10Q01780 885 aaKnown RBP27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 PICALMQ13492 652 aa27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 COL9A3Q14050 684 aaPredicted RBP27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 TOMM22Q9NS69 142 aa27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 LIMCH1Q9UPQ0 1083 aa27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 PCDHAC2Q9Y5I4 1007 aa27.09■■□□□ 1.93
RBFOX1-206ENST00000535565 HSP90AA1P07900 732 aaKnown RBP27.08■■□□□ 1.93
RBFOX1-206ENST00000535565 SAP30BPQ9UHR5 308 aaKnown RBP27.08■■□□□ 1.93
RBFOX1-206ENST00000535565 GJA3Q9Y6H8 435 aa27.08■■□□□ 1.93
RBFOX1-206ENST00000535565 SPDYE2BA6NHP3 402 aa27.07■■□□□ 1.92
RBFOX1-206ENST00000535565 B4E1Z4 1266 aa27.07■■□□□ 1.92
RBFOX1-206ENST00000535565 SPDYE6P0CI01 402 aa27.07■■□□□ 1.92
RBFOX1-206ENST00000535565 CYP2D6P10635 497 aa27.07■■□□□ 1.92
RBFOX1-206ENST00000535565 PDE4BQ07343 736 aa27.07■■□□□ 1.92
RBFOX1-206ENST00000535565 GPR162Q16538 588 aa27.07■■□□□ 1.92
RBFOX1-206ENST00000535565 Q6ZUG5 572 aa27.07■■□□□ 1.92
RBFOX1-206ENST00000535565 STK11IPQ8N1F8 1099 aa27.07■■□□□ 1.92
RBFOX1-206ENST00000535565 MTMR14Q8NCE2 650 aa27.07■■□□□ 1.92
RBFOX1-206ENST00000535565 DPF2Q92785 391 aa27.07■■□□□ 1.92
RBFOX1-206ENST00000535565 ROBO3Q96MS0 1386 aa27.07■■□□□ 1.92
RBFOX1-206ENST00000535565 PRC1O43663 620 aa27.06■■□□□ 1.92
RBFOX1-206ENST00000535565 RRP12Q5JTH9 1297 aaKnown RBP27.06■■□□□ 1.92
RBFOX1-206ENST00000535565 IDI2Q9BXS1 227 aa27.06■■□□□ 1.92
RBFOX1-206ENST00000535565 TMOD2Q9NZR1 351 aa27.06■■□□□ 1.92
RBFOX1-206ENST00000535565 ZNF541Q9H0D2 1346 aa27.06■■□□□ 1.92
RBFOX1-206ENST00000535565 TMX3Q96JJ7 454 aa27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 PRMT6Q96LA8 375 aaPredicted RBP27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 RNF181Q9P0P0 153 aa27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 NPM3O75607 178 aaKnown RBP27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 FGRP09769 529 aa27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 GMPSP49915 693 aaPredicted RBP27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 TOB2Q14106 344 aaPredicted RBP27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 SLC4A8Q2Y0W8 1093 aa27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 CHST3Q7LGC8 479 aa27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 ESR2Q92731 530 aa27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 ZSCAN31Q96LW9 406 aaPredicted RBP27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 OSBPL5Q9H0X9 879 aaPredicted RBP27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 TDRD3Q9H7E2 651 aaKnown RBP27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 DDX4Q9NQI0 724 aaKnown RBP27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 INCENPQ9NQS7 918 aa27.05■■□□□ 1.92
RBFOX1-206ENST00000535565 KDM4AO75164 1064 aa27.04■■□□□ 1.92
RBFOX1-206ENST00000535565 NT5C2P49902 561 aa27.04■■□□□ 1.92
RBFOX1-206ENST00000535565 TTC6Q86TZ1 520 aa27.04■■□□□ 1.92
RBFOX1-206ENST00000535565 LRRC2Q9BYS8 371 aa27.04■■□□□ 1.92
RBFOX1-206ENST00000535565 ZNF287Q9HBT7 754 aa27.04■■□□□ 1.92
RBFOX1-206ENST00000535565 MYOZ2Q9NPC6 264 aa27.04■■□□□ 1.92
RBFOX1-206ENST00000535565 TACC3Q9Y6A5 838 aa27.04■■□□□ 1.92
RBFOX1-206ENST00000535565 MYO1BO43795 1136 aa27.03■■□□□ 1.92
RBFOX1-206ENST00000535565 ZNF280AP59817 542 aaPredicted RBP27.03■■□□□ 1.92
RBFOX1-206ENST00000535565 GPC2Q8N158 579 aa27.03■■□□□ 1.92
RBFOX1-206ENST00000535565 FBXL16Q8N461 479 aa27.03■■□□□ 1.92
RBFOX1-206ENST00000535565 SH2B1Q9NRF2 756 aaPredicted RBP27.03■■□□□ 1.92
RBFOX1-206ENST00000535565 MYH8P13535 1937 aa27.02■■□□□ 1.92
RBFOX1-206ENST00000535565 SMIM22K7EJ46 135 aa27.02■■□□□ 1.92
RBFOX1-206ENST00000535565 ORC4O43929 436 aa27.02■■□□□ 1.92
RBFOX1-206ENST00000535565 GRIN3BO60391 1043 aa27.02■■□□□ 1.92
RBFOX1-206ENST00000535565 ANTXR2P58335 489 aa27.02■■□□□ 1.92
RBFOX1-206ENST00000535565 NFIAQ12857 509 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms