RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 MPSTP25325 297 aa7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 GRIK1P39086 918 aa7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 EIF1AXP47813 144 aaKnown RBP7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 PREPP48147 710 aa7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 ARL4DP49703 201 aa7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 KRTAP1-3Q8IUG1 177 aa7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 CLEC10AQ8IUN9 316 aa7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 FAM20CQ8IXL6 584 aa7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 RUSC1Q9BVN2 902 aa7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 KCNF1Q9H3M0 494 aa7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 SPAG9O60271 1321 aaKnown RBP7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 FANCIQ9NVI1 1328 aa7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 SCAF11Q99590 1463 aaKnown RBP7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 ABCA6Q8N139 1617 aa7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 PPRC1Q5VV67 1664 aaKnown RBP7.92□□□□□ -1.14
TNFRSF1A-206ENST00000535038 BMP3P12645 472 aa7.91□□□□□ -1.14
TNFRSF1A-206ENST00000535038 IRX6P78412 446 aaPredicted RBP7.91□□□□□ -1.14
TNFRSF1A-206ENST00000535038 FDX2Q6P4F2 183 aa7.91□□□□□ -1.14
TNFRSF1A-206ENST00000535038 INTS5Q6P9B9 1019 aaKnown RBP7.91□□□□□ -1.14
TNFRSF1A-206ENST00000535038 GTF3C2Q8WUA4 911 aaPredicted RBP7.91□□□□□ -1.14
TNFRSF1A-206ENST00000535038 HHIPQ96QV1 700 aa7.91□□□□□ -1.14
TNFRSF1A-206ENST00000535038 FAM83CQ9BQN1 747 aa7.91□□□□□ -1.14
TNFRSF1A-206ENST00000535038 CHRDQ9H2X0 955 aa7.91□□□□□ -1.14
TNFRSF1A-206ENST00000535038 SOX13Q9UN79 622 aa7.91□□□□□ -1.14
TNFRSF1A-206ENST00000535038 NPC1L1Q9UHC9 1359 aa7.91□□□□□ -1.14
TNFRSF1A-206ENST00000535038 FRMPD1Q5SYB0 1578 aa7.91□□□□□ -1.14
TNFRSF1A-206ENST00000535038 MROH2AA6NES4 1674 aa7.91□□□□□ -1.14
TNFRSF1A-206ENST00000535038 KIF1BO60333 1816 aa7.9□□□□□ -1.14
TNFRSF1A-206ENST00000535038 ADGRB3O60242 1522 aa7.9□□□□□ -1.14
TNFRSF1A-206ENST00000535038 ADGRL1O94910 1474 aa7.9□□□□□ -1.14
TNFRSF1A-206ENST00000535038 ASXL2Q76L83 1435 aa7.9□□□□□ -1.14
TNFRSF1A-206ENST00000535038 IRAK1P51617 712 aa7.9□□□□□ -1.14
TNFRSF1A-206ENST00000535038 C19orf57Q0VDD7 668 aa7.9□□□□□ -1.14
TNFRSF1A-206ENST00000535038 ALKBH2Q6NS38 261 aa7.9□□□□□ -1.14
TNFRSF1A-206ENST00000535038 BEND4Q6ZU67 534 aa7.9□□□□□ -1.14
TNFRSF1A-206ENST00000535038 AFAP1Q8N556 730 aa7.9□□□□□ -1.14
TNFRSF1A-206ENST00000535038 TMEM102Q8N9M5 508 aaPredicted RBP7.9□□□□□ -1.14
TNFRSF1A-206ENST00000535038 HIF3AQ9Y2N7 669 aa7.9□□□□□ -1.14
TNFRSF1A-206ENST00000535038 CFAP74Q9C0B2 1584 aa7.89□□□□□ -1.15
TNFRSF1A-206ENST00000535038 SETBP1Q9Y6X0 1596 aa7.89□□□□□ -1.15
TNFRSF1A-206ENST00000535038 GP2P55259 537 aaKnown RBP7.89□□□□□ -1.15
TNFRSF1A-206ENST00000535038 LCE3BQ5TA77 95 aa7.89□□□□□ -1.15
TNFRSF1A-206ENST00000535038 TMC1Q8TDI8 760 aa7.89□□□□□ -1.15
TNFRSF1A-206ENST00000535038 OSMRQ99650 979 aa7.89□□□□□ -1.15
TNFRSF1A-206ENST00000535038 ANP32EQ9BTT0 268 aa7.89□□□□□ -1.15
TNFRSF1A-206ENST00000535038 POLIQ9UNA4 740 aa7.89□□□□□ -1.15
TNFRSF1A-206ENST00000535038 ZC3H13Q5T200 1668 aaKnown RBP7.89□□□□□ -1.15
TNFRSF1A-206ENST00000535038 ZNF518AQ6AHZ1 1483 aa7.88□□□□□ -1.15
TNFRSF1A-206ENST00000535038 MLH3Q9UHC1 1453 aa7.88□□□□□ -1.15
TNFRSF1A-206ENST00000535038 GAS2O43903 313 aaKnown RBP7.88□□□□□ -1.15
TNFRSF1A-206ENST00000535038 SPINK2P20155 84 aa7.88□□□□□ -1.15
TNFRSF1A-206ENST00000535038 PDE3BQ13370 1112 aa7.88□□□□□ -1.15
TNFRSF1A-206ENST00000535038 AAMPQ13685 434 aa7.88□□□□□ -1.15
TNFRSF1A-206ENST00000535038 RGL3Q3MIN7 710 aa7.88□□□□□ -1.15
TNFRSF1A-206ENST00000535038 SHKBP1Q8TBC3 707 aa7.88□□□□□ -1.15
TNFRSF1A-206ENST00000535038 BSNDQ8WZ55 320 aa7.88□□□□□ -1.15
TNFRSF1A-206ENST00000535038 NXPE3Q969Y0 559 aa7.88□□□□□ -1.15
TNFRSF1A-206ENST00000535038 ZKSCAN3Q9BRR0 538 aa7.88□□□□□ -1.15
TNFRSF1A-206ENST00000535038 KDM5AP29375 1690 aaKnown RBP7.88□□□□□ -1.15
TNFRSF1A-206ENST00000535038 HECW2Q9P2P5 1572 aa7.88□□□□□ -1.15
TNFRSF1A-206ENST00000535038 PIK3C2GO75747 1445 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 PPLO60437 1756 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 SBNO2Q9Y2G9 1366 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 MEGF11A6BM72 1044 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 PRR19A6NJB7 356 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 EREGO14944 169 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 PAX4O43316 350 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 PHACTR2O75167 634 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 EDN3P14138 238 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 TMF1P82094 1093 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 MTMR3Q13615 1198 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 IKBKEQ14164 716 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 HGSNATQ68CP4 663 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 SNX29Q8TEQ0 813 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 OAS3Q9Y6K5 1087 aaKnown RBP7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 UGGT1Q9NYU2 1555 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 ASXL1Q8IXJ9 1541 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 ERVK-7P63135 1459 aa7.87□□□□□ -1.15
TNFRSF1A-206ENST00000535038 POGZQ7Z3K3 1410 aa7.86□□□□□ -1.15
TNFRSF1A-206ENST00000535038 PIK3C2BO00750 1634 aa7.86□□□□□ -1.15
TNFRSF1A-206ENST00000535038 SOX1O00570 391 aaPredicted RBP7.86□□□□□ -1.15
TNFRSF1A-206ENST00000535038 TNFRSF21O75509 655 aa7.86□□□□□ -1.15
TNFRSF1A-206ENST00000535038 SSFA2P28290 1259 aa7.86□□□□□ -1.15
TNFRSF1A-206ENST00000535038 EHHADHQ08426 723 aa7.86□□□□□ -1.15
TNFRSF1A-206ENST00000535038 POLR3GLQ9BT43 218 aa7.86□□□□□ -1.15
TNFRSF1A-206ENST00000535038 PANK3Q9H999 370 aa7.86□□□□□ -1.15
TNFRSF1A-206ENST00000535038 KANK1Q14678 1352 aa7.85□□□□□ -1.15
TNFRSF1A-206ENST00000535038 ADGRB1O14514 1584 aa7.85□□□□□ -1.15
TNFRSF1A-206ENST00000535038 TMEM88BA6NKF7 163 aa7.85□□□□□ -1.15
TNFRSF1A-206ENST00000535038 MAP4P27816 1152 aaKnown RBP7.85□□□□□ -1.15
TNFRSF1A-206ENST00000535038 USP5P45974 858 aa7.85□□□□□ -1.15
TNFRSF1A-206ENST00000535038 NUTM2GQ5VZR2 741 aa7.85□□□□□ -1.15
TNFRSF1A-206ENST00000535038 B4GALNT3Q6L9W6 998 aa7.85□□□□□ -1.15
TNFRSF1A-206ENST00000535038 VN1R5Q7Z5H4 357 aa7.85□□□□□ -1.15
TNFRSF1A-206ENST00000535038 DTX1Q86Y01 620 aa7.85□□□□□ -1.15
TNFRSF1A-206ENST00000535038 ASAP3Q8TDY4 903 aa7.85□□□□□ -1.15
TNFRSF1A-206ENST00000535038 USP26Q9BXU7 913 aa7.85□□□□□ -1.15
TNFRSF1A-206ENST00000535038 GOLGA2P5Q9HBQ8 144 aa7.85□□□□□ -1.15
TNFRSF1A-206ENST00000535038 ZNF521Q96K83 1311 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms