RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 TMEM63CQ9P1W3 806 aa15.66■□□□□ 0.1
BEST1-208ENST00000534553 SLC12A7Q9Y666 1083 aa15.66■□□□□ 0.1
BEST1-208ENST00000534553 TNS1Q9HBL0 1735 aaKnown RBP15.66■□□□□ 0.1
BEST1-208ENST00000534553 CCDC196A0A1B0GTZ2 297 aa15.66■□□□□ 0.1
BEST1-208ENST00000534553 WTAPQ15007 396 aa15.66■□□□□ 0.1
BEST1-208ENST00000534553 SBK1Q52WX2 424 aa15.66■□□□□ 0.1
BEST1-208ENST00000534553 FERMT3Q86UX7 667 aa15.66■□□□□ 0.1
BEST1-208ENST00000534553 UBAC1Q9BSL1 405 aa15.66■□□□□ 0.1
BEST1-208ENST00000534553 CD209Q9NNX6 404 aa15.66■□□□□ 0.1
BEST1-208ENST00000534553 GPHNQ9NQX3 736 aaPredicted RBP15.66■□□□□ 0.1
BEST1-208ENST00000534553 ATP6V0A2Q9Y487 856 aa15.66■□□□□ 0.1
BEST1-208ENST00000534553 STK36Q9NRP7 1315 aa15.65■□□□□ 0.1
BEST1-208ENST00000534553 CCDC183Q5T5S1 534 aa15.65■□□□□ 0.1
BEST1-208ENST00000534553 LRSAM1Q6UWE0 723 aa15.65■□□□□ 0.1
BEST1-208ENST00000534553 SPATA32Q96LK8 384 aa15.65■□□□□ 0.1
BEST1-208ENST00000534553 ZNF396Q96N95 335 aaPredicted RBP15.65■□□□□ 0.1
BEST1-208ENST00000534553 TOMM22Q9NS69 142 aa15.65■□□□□ 0.1
BEST1-208ENST00000534553 MINDY4BA8MYZ0 360 aa15.64■□□□□ 0.09
BEST1-208ENST00000534553 SRGNP10124 158 aa15.64■□□□□ 0.09
BEST1-208ENST00000534553 XRCC6P12956 609 aaKnown RBP eCLIP15.64■□□□□ 0.09
BEST1-208ENST00000534553 PPP4CP60510 307 aa15.64■□□□□ 0.09
BEST1-208ENST00000534553 DYNLL1P63167 89 aaKnown RBP15.64■□□□□ 0.09
BEST1-208ENST00000534553 AMOTL1Q8IY63 956 aa15.64■□□□□ 0.09
BEST1-208ENST00000534553 TBC1D16Q8TBP0 767 aa15.64■□□□□ 0.09
BEST1-208ENST00000534553 WASF1Q92558 559 aa15.64■□□□□ 0.09
BEST1-208ENST00000534553 C8orf76Q96K31 380 aa15.64■□□□□ 0.09
BEST1-208ENST00000534553 ORC3Q9UBD5 711 aaPredicted RBP15.64■□□□□ 0.09
BEST1-208ENST00000534553 GOLGA6L4A6NEF3 574 aa15.64■□□□□ 0.09
BEST1-208ENST00000534553 GOLGA8AA7E2F4 631 aa15.64■□□□□ 0.09
BEST1-208ENST00000534553 ORC4O43929 436 aa15.64■□□□□ 0.09
BEST1-208ENST00000534553 GADD45BO75293 160 aaPredicted RBP15.64■□□□□ 0.09
BEST1-208ENST00000534553 FDPSP14324 419 aaKnown RBP15.64■□□□□ 0.09
BEST1-208ENST00000534553 BRAPQ7Z569 592 aa15.64■□□□□ 0.09
BEST1-208ENST00000534553 IQCA1Q86XH1 822 aa15.64■□□□□ 0.09
BEST1-208ENST00000534553 DCP1AQ9NPI6 582 aaPredicted RBP15.64■□□□□ 0.09
BEST1-208ENST00000534553 AATFQ9NY61 560 aaKnown RBP eCLIP15.64■□□□□ 0.09
BEST1-208ENST00000534553 SUGT1Q9Y2Z0 365 aa15.64■□□□□ 0.09
BEST1-208ENST00000534553 RRP12Q5JTH9 1297 aaKnown RBP15.63■□□□□ 0.09
BEST1-208ENST00000534553 CTR9Q6PD62 1173 aa15.63■□□□□ 0.09
BEST1-208ENST00000534553 FBXO18Q8NFZ0 1043 aa15.63■□□□□ 0.09
BEST1-208ENST00000534553 ANP32BQ92688 251 aaKnown RBP15.63■□□□□ 0.09
BEST1-208ENST00000534553 MASTLQ96GX5 879 aa15.63■□□□□ 0.09
BEST1-208ENST00000534553 RGS17Q9UGC6 210 aaPredicted RBP15.63■□□□□ 0.09
BEST1-208ENST00000534553 LTBP1Q14766 1721 aa15.63■□□□□ 0.09
BEST1-208ENST00000534553 TCHHQ07283 1943 aa15.62■□□□□ 0.09
BEST1-208ENST00000534553 MMP10P09238 476 aa15.62■□□□□ 0.09
BEST1-208ENST00000534553 PLCG2P16885 1265 aa15.62■□□□□ 0.09
BEST1-208ENST00000534553 PDE4BQ07343 736 aa15.62■□□□□ 0.09
BEST1-208ENST00000534553 TTC6Q86TZ1 520 aa15.62■□□□□ 0.09
BEST1-208ENST00000534553 MICU3Q86XE3 530 aa15.62■□□□□ 0.09
BEST1-208ENST00000534553 GAS2L3Q86XJ1 694 aa15.62■□□□□ 0.09
BEST1-208ENST00000534553 LEO1Q8WVC0 666 aaPredicted RBP15.62■□□□□ 0.09
BEST1-208ENST00000534553 COA1Q9GZY4 146 aa15.62■□□□□ 0.09
BEST1-208ENST00000534553 MROH7-TTC4A0A0A0MT08 1334 aa15.62■□□□□ 0.09
BEST1-208ENST00000534553 FAM205AQ6ZU69 1335 aa15.62■□□□□ 0.09
BEST1-208ENST00000534553 CALM1P0DP23 149 aa15.61■□□□□ 0.09
BEST1-208ENST00000534553 CALM2P0DP24 149 aa15.61■□□□□ 0.09
BEST1-208ENST00000534553 CALM3P0DP25 149 aa15.61■□□□□ 0.09
BEST1-208ENST00000534553 IFNAR1P17181 557 aa15.61■□□□□ 0.09
BEST1-208ENST00000534553 IARSP41252 1262 aaKnown RBP15.61■□□□□ 0.09
BEST1-208ENST00000534553 POTEAQ6S8J7 498 aa15.61■□□□□ 0.09
BEST1-208ENST00000534553 FAM163AQ96GL9 167 aaPredicted RBP15.61■□□□□ 0.09
BEST1-208ENST00000534553 RBM27Q9P2N5 1060 aaKnown RBP15.61■□□□□ 0.09
BEST1-208ENST00000534553 ANKRD31Q8N7Z5 1873 aa15.61■□□□□ 0.09
BEST1-208ENST00000534553 USP17L12C9JPN9 530 aa15.61■□□□□ 0.09
BEST1-208ENST00000534553 USP17L21D6R901 530 aa15.61■□□□□ 0.09
BEST1-208ENST00000534553 C6orf229H3BNL8 230 aa15.61■□□□□ 0.09
BEST1-208ENST00000534553 CCDC178Q5BJE1 867 aa15.61■□□□□ 0.09
BEST1-208ENST00000534553 TRIM22Q8IYM9 498 aa15.61■□□□□ 0.09
BEST1-208ENST00000534553 POLLQ9UGP5 575 aa15.61■□□□□ 0.09
BEST1-208ENST00000534553 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.61■□□□□ 0.09
BEST1-208ENST00000534553 LAMB1P07942 1786 aa15.61■□□□□ 0.09
BEST1-208ENST00000534553 SYCE3A1L190 88 aa15.6■□□□□ 0.09
BEST1-208ENST00000534553 TRIM29Q14134 588 aa15.6■□□□□ 0.09
BEST1-208ENST00000534553 RTN1Q16799 776 aa15.6■□□□□ 0.09
BEST1-208ENST00000534553 ZSCAN10Q96SZ4 725 aaPredicted RBP15.6■□□□□ 0.09
BEST1-208ENST00000534553 ZNF287Q9HBT7 754 aa15.6■□□□□ 0.09
BEST1-208ENST00000534553 TACC3Q9Y6A5 838 aa15.6■□□□□ 0.09
BEST1-208ENST00000534553 ROBO3Q96MS0 1386 aa15.6■□□□□ 0.09
BEST1-208ENST00000534553 TNKSO95271 1327 aa15.6■□□□□ 0.09
BEST1-208ENST00000534553 DTNBO60941 627 aa15.59■□□□□ 0.09
BEST1-208ENST00000534553 ADD1P35611 737 aaKnown RBP15.59■□□□□ 0.09
BEST1-208ENST00000534553 USP5P45974 858 aa15.59■□□□□ 0.09
BEST1-208ENST00000534553 NASPP49321 788 aaPredicted RBP15.59■□□□□ 0.09
BEST1-208ENST00000534553 SSRP1Q08945 709 aaKnown RBP15.59■□□□□ 0.09
BEST1-208ENST00000534553 SEC23AQ15436 765 aa15.59■□□□□ 0.09
BEST1-208ENST00000534553 NTRK3Q16288 839 aa15.59■□□□□ 0.09
BEST1-208ENST00000534553 MPNDQ8N594 471 aa15.59■□□□□ 0.09
BEST1-208ENST00000534553 EYA3Q99504 573 aa15.59■□□□□ 0.09
BEST1-208ENST00000534553 DDAH1O94760 285 aa15.59■□□□□ 0.09
BEST1-208ENST00000534553 FMNL1O95466 1100 aaPredicted RBP15.59■□□□□ 0.09
BEST1-208ENST00000534553 CDC27P30260 824 aa15.59■□□□□ 0.09
BEST1-208ENST00000534553 STYK1Q6J9G0 422 aa15.59■□□□□ 0.09
BEST1-208ENST00000534553 CATIPQ7Z7H3 387 aa15.59■□□□□ 0.09
BEST1-208ENST00000534553 ZNF654Q8IZM8 581 aa15.59■□□□□ 0.09
BEST1-208ENST00000534553 ALG1Q9BT22 464 aa15.59■□□□□ 0.09
BEST1-208ENST00000534553 ZC3H12CQ9C0D7 883 aaKnown RBP15.59■□□□□ 0.09
BEST1-208ENST00000534553 INCENPQ9NQS7 918 aa15.59■□□□□ 0.09
BEST1-208ENST00000534553 DDX19AQ9NUU7 478 aaKnown RBP15.59■□□□□ 0.09
BEST1-208ENST00000534553 RBM28Q9NW13 759 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms