RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 LZTS2Q9BRK4 669 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 CDCA7Q9BWT1 371 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-236ENST00000533667 ZRANB1Q9UGI0 708 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 IQSEC3Q9UPP2 1182 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-236ENST00000533667 SBNO2Q9Y2G9 1366 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 ADGRL2O95490 1459 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 VWA3AA6NCI4 1184 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 NDC80O14777 642 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 GIGYF1O75420 1035 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-236ENST00000533667 IL13P35225 146 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 FANCCQ00597 558 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 PPP1R7Q15435 360 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 RPAINQ86UA6 219 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 CCDC50Q8IVM0 306 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 C19orf44Q9H6X5 657 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 STIM2Q9P246 746 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 MAP3K19Q56UN5 1328 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 GCP02774 474 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 ZNF853P0CG23 659 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 PLCB3Q01970 1234 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 PICALMQ13492 652 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 SLC4A8Q2Y0W8 1093 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 CHST3Q7LGC8 479 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 FCHSD1Q86WN1 690 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 KBTBD3Q8NAB2 608 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 CCDC110Q8TBZ0 833 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 IFT81Q8WYA0 676 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 IFT74Q96LB3 600 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 CCDC114Q96M63 670 aa7.85□□□□□ -1.15
CTNND1-236ENST00000533667 NUCKS1Q9H1E3 243 aaKnown RBP7.85□□□□□ -1.15
CTNND1-236ENST00000533667 TRAF5O00463 557 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 CALUO43852 315 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-236ENST00000533667 MYRIPQ8NFW9 859 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 AFAP1L1Q8TED9 768 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 LEO1Q8WVC0 666 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-236ENST00000533667 RPGRIP1Q96KN7 1286 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 NKIRAS1Q9NYS0 192 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 SYNRGQ9UMZ2 1314 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 MAST1Q9Y2H9 1570 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 DKC1O60832 514 aaKnown RBP eCLIP7.84□□□□□ -1.15
CTNND1-236ENST00000533667 MAP3K9P80192 1104 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 PAK1Q13153 545 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 IFT20Q8IY31 132 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 CCDC51Q96ER9 411 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 CTNND2Q9UQB3 1225 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 TBX22Q9Y458 520 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 IBTKQ9P2D0 1353 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-236ENST00000533667 KIF1CO43896 1103 aaKnown RBP7.84□□□□□ -1.15
CTNND1-236ENST00000533667 LACTBP83111 547 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-236ENST00000533667 PDE4DQ08499 809 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 RBBP5Q15291 538 aaKnown RBP7.84□□□□□ -1.15
CTNND1-236ENST00000533667 TRMT1LQ7Z2T5 733 aaKnown RBP7.84□□□□□ -1.15
CTNND1-236ENST00000533667 MIGA1Q8NAN2 632 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 NOX5Q96PH1 765 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 PPP1R9BQ96SB3 815 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 TXNDC16Q9P2K2 825 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 RTCBQ9Y3I0 505 aaKnown RBP7.84□□□□□ -1.15
CTNND1-236ENST00000533667 PZPP20742 1482 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 MAST3O60307 1309 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 C8orf74Q6P047 294 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 RUFY4Q6ZNE9 571 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 KRT25Q7Z3Z0 450 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 POTEDQ86YR6 584 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 RGS22Q8NE09 1264 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 DSCC1Q9BVC3 393 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 TRIM7Q9C029 511 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 ZNF219Q9P2Y4 722 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-236ENST00000533667 ANAPC4Q9UJX5 808 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 KIF21AQ7Z4S6 1674 aa7.84□□□□□ -1.15
CTNND1-236ENST00000533667 PLXNC1O60486 1568 aa7.84□□□□□ -1.16
CTNND1-236ENST00000533667 CETN3O15182 167 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 ZNF174Q15697 407 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 ZNF790Q6PG37 636 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 RAB3IL1Q8TBN0 382 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 LRRC59Q96AG4 307 aaKnown RBP7.83□□□□□ -1.16
CTNND1-236ENST00000533667 CBX8Q9HC52 389 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 EXOC7Q9UPT5 735 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 SH3TC1Q8TE82 1336 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 ZEB2O60315 1214 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 PDE8AO60658 829 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 KRT24Q2M2I5 525 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 WDR44Q5JSH3 913 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 CCDC84Q86UT8 332 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-236ENST00000533667 DIS3L2Q8IYB7 885 aaKnown RBP7.83□□□□□ -1.16
CTNND1-236ENST00000533667 UBL4BQ8N7F7 174 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 TMEM87AQ8NBN3 555 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 PPFIBP2Q8ND30 876 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 SECISBP2LQ93073 1101 aaKnown RBP7.83□□□□□ -1.16
CTNND1-236ENST00000533667 CFAP57Q96MR6 1250 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 ARHGEF10O15013 1369 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 TMEM110-MUSTN1A8MSY1 372 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 TNFAIP3P21580 790 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 SLC9C1Q4G0N8 1177 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 TTC38Q5R3I4 469 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 DAAM2Q86T65 1068 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 CSGALNACT2Q8N6G5 542 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 CCDC63Q8NA47 563 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-236ENST00000533667 B4E1Z4 1266 aa7.83□□□□□ -1.16
CTNND1-236ENST00000533667 ZNF202O95125 648 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms