RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 DEFB129Q9H1M3 183 aa25.22■■□□□ 1.63
PTP4A2-215ENST00000533408 DCP1AQ9NPI6 582 aaPredicted RBP25.22■■□□□ 1.63
PTP4A2-215ENST00000533408 FLT1P17948 1338 aa25.21■■□□□ 1.63
PTP4A2-215ENST00000533408 HLA-DOAP06340 250 aa25.21■■□□□ 1.63
PTP4A2-215ENST00000533408 HSPD1P10809 573 aaKnown RBP25.21■■□□□ 1.63
PTP4A2-215ENST00000533408 TDO2P48775 406 aa25.21■■□□□ 1.63
PTP4A2-215ENST00000533408 RASA3Q14644 834 aa25.21■■□□□ 1.63
PTP4A2-215ENST00000533408 CHADLQ6NUI6 762 aa25.21■■□□□ 1.63
PTP4A2-215ENST00000533408 OSBPL5Q9H0X9 879 aaPredicted RBP25.21■■□□□ 1.63
PTP4A2-215ENST00000533408 ARPP21Q9UBL0 812 aaPredicted RBP25.21■■□□□ 1.63
PTP4A2-215ENST00000533408 UTRNP46939 3433 aa25.21■■□□□ 1.63
PTP4A2-215ENST00000533408 GSG1L2A8MUP6 293 aa25.2■■□□□ 1.62
PTP4A2-215ENST00000533408 POLR3DP05423 398 aaPredicted RBP25.2■■□□□ 1.62
PTP4A2-215ENST00000533408 TCP10Q12799 353 aa25.2■■□□□ 1.62
PTP4A2-215ENST00000533408 CCDC129Q6ZRS4 1044 aa25.2■■□□□ 1.62
PTP4A2-215ENST00000533408 ZNF589Q86UQ0 364 aaPredicted RBP25.2■■□□□ 1.62
PTP4A2-215ENST00000533408 MAPKAPK5Q8IW41 473 aa25.2■■□□□ 1.62
PTP4A2-215ENST00000533408 IFNL3Q8IZI9 196 aa25.2■■□□□ 1.62
PTP4A2-215ENST00000533408 ZNF784Q8NCA9 323 aaPredicted RBP25.2■■□□□ 1.62
PTP4A2-215ENST00000533408 SDR42E1Q8WUS8 393 aa25.2■■□□□ 1.62
PTP4A2-215ENST00000533408 ANO2Q9NQ90 1003 aa25.2■■□□□ 1.62
PTP4A2-215ENST00000533408 MCM9Q9NXL9 1143 aa25.2■■□□□ 1.62
PTP4A2-215ENST00000533408 FAM198AQ9UFP1 575 aa25.2■■□□□ 1.62
PTP4A2-215ENST00000533408 ZMYM6O95789 1325 aa25.19■■□□□ 1.62
PTP4A2-215ENST00000533408 PRKAB2O43741 272 aa25.19■■□□□ 1.62
PTP4A2-215ENST00000533408 TOMM70O94826 608 aa25.19■■□□□ 1.62
PTP4A2-215ENST00000533408 SLC3A2P08195 630 aaKnown RBP25.19■■□□□ 1.62
PTP4A2-215ENST00000533408 NF2P35240 595 aa25.19■■□□□ 1.62
PTP4A2-215ENST00000533408 CACNB3P54284 484 aa25.19■■□□□ 1.62
PTP4A2-215ENST00000533408 NFIAQ12857 509 aa25.19■■□□□ 1.62
PTP4A2-215ENST00000533408 U3KPZ7 1027 aaPredicted RBP25.19■■□□□ 1.62
PTP4A2-215ENST00000533408 COL2A1P02458 1487 aaPredicted RBP25.19■■□□□ 1.62
PTP4A2-215ENST00000533408 SBK1Q52WX2 424 aa25.18■■□□□ 1.62
PTP4A2-215ENST00000533408 FOXP4Q8IVH2 680 aaPredicted RBP25.18■■□□□ 1.62
PTP4A2-215ENST00000533408 SMC1BQ8NDV3 1235 aa25.18■■□□□ 1.62
PTP4A2-215ENST00000533408 ZNF287Q9HBT7 754 aa25.18■■□□□ 1.62
PTP4A2-215ENST00000533408 PI4KBQ9UBF8 816 aa25.18■■□□□ 1.62
PTP4A2-215ENST00000533408 MKRN1Q9UHC7 482 aaKnown RBP25.18■■□□□ 1.62
PTP4A2-215ENST00000533408 ASTN2O75129 1339 aaPredicted RBP25.17■■□□□ 1.62
PTP4A2-215ENST00000533408 RBM46Q8TBY0 533 aaKnown RBP25.17■■□□□ 1.62
PTP4A2-215ENST00000533408 TRIM34Q9BYJ4 488 aa25.17■■□□□ 1.62
PTP4A2-215ENST00000533408 ATRNL1Q5VV63 1379 aa25.17■■□□□ 1.62
PTP4A2-215ENST00000533408 KIF3CO14782 793 aa25.16■■□□□ 1.62
PTP4A2-215ENST00000533408 RNF20Q5VTR2 975 aa25.16■■□□□ 1.62
PTP4A2-215ENST00000533408 USP48Q86UV5 1035 aa25.16■■□□□ 1.62
PTP4A2-215ENST00000533408 MAP4K1Q92918 833 aa25.16■■□□□ 1.62
PTP4A2-215ENST00000533408 DDX4Q9NQI0 724 aaKnown RBP25.16■■□□□ 1.62
PTP4A2-215ENST00000533408 ECM29Q5VYK3 1845 aa25.16■■□□□ 1.62
PTP4A2-215ENST00000533408 USP17L12C9JPN9 530 aa25.15■■□□□ 1.62
PTP4A2-215ENST00000533408 USP17L21D6R901 530 aa25.15■■□□□ 1.62
PTP4A2-215ENST00000533408 FGAP02671 866 aa25.15■■□□□ 1.62
PTP4A2-215ENST00000533408 IMMTQ16891 758 aaKnown RBP25.15■■□□□ 1.62
PTP4A2-215ENST00000533408 DCAF15Q66K64 600 aa25.15■■□□□ 1.62
PTP4A2-215ENST00000533408 MAP1SQ66K74 1059 aaPredicted RBP25.15■■□□□ 1.62
PTP4A2-215ENST00000533408 CSRNP1Q96S65 589 aa25.15■■□□□ 1.62
PTP4A2-215ENST00000533408 CNTNAP1P78357 1384 aa25.15■■□□□ 1.62
PTP4A2-215ENST00000533408 ADAMTSL1Q8N6G6 1762 aa25.14■■□□□ 1.62
PTP4A2-215ENST00000533408 VPS53Q5VIR6 699 aa25.14■■□□□ 1.62
PTP4A2-215ENST00000533408 CTR9Q6PD62 1173 aa25.14■■□□□ 1.62
PTP4A2-215ENST00000533408 TMEM39BQ9GZU3 492 aa25.14■■□□□ 1.62
PTP4A2-215ENST00000533408 EHD4Q9H223 541 aa25.14■■□□□ 1.62
PTP4A2-215ENST00000533408 UPF2Q9HAU5 1272 aaKnown RBP25.14■■□□□ 1.62
PTP4A2-215ENST00000533408 HERC5Q9UII4 1024 aaKnown RBP25.14■■□□□ 1.62
PTP4A2-215ENST00000533408 ZNF213O14771 459 aa25.13■■□□□ 1.61
PTP4A2-215ENST00000533408 MCCP23508 829 aa25.13■■□□□ 1.61
PTP4A2-215ENST00000533408 NT5C2P49902 561 aa25.13■■□□□ 1.61
PTP4A2-215ENST00000533408 FSTL1Q12841 308 aa25.13■■□□□ 1.61
PTP4A2-215ENST00000533408 C12orf60Q5U649 245 aa25.13■■□□□ 1.61
PTP4A2-215ENST00000533408 CRACR2BQ8N4Y2 399 aaPredicted RBP25.13■■□□□ 1.61
PTP4A2-215ENST00000533408 SAP30BPQ9UHR5 308 aaKnown RBP25.13■■□□□ 1.61
PTP4A2-215ENST00000533408 PALD1Q9ULE6 856 aa25.13■■□□□ 1.61
PTP4A2-215ENST00000533408 MINDY4BA8MYZ0 360 aa25.12■■□□□ 1.61
PTP4A2-215ENST00000533408 PPP1R12BO60237 982 aaPredicted RBP25.12■■□□□ 1.61
PTP4A2-215ENST00000533408 TBC1D12O60347 775 aa25.12■■□□□ 1.61
PTP4A2-215ENST00000533408 POTEIP0CG38 1075 aa25.12■■□□□ 1.61
PTP4A2-215ENST00000533408 POTEJP0CG39 1038 aa25.12■■□□□ 1.61
PTP4A2-215ENST00000533408 PCP11498 1178 aaKnown RBP25.12■■□□□ 1.61
PTP4A2-215ENST00000533408 GLIS2Q9BZE0 524 aaPredicted RBP25.12■■□□□ 1.61
PTP4A2-215ENST00000533408 LSG1Q9H089 658 aaKnown RBP25.12■■□□□ 1.61
PTP4A2-215ENST00000533408 SERPINB13Q9UIV8 391 aa25.12■■□□□ 1.61
PTP4A2-215ENST00000533408 C8orf34Q49A92 452 aa25.11■■□□□ 1.61
PTP4A2-215ENST00000533408 IL25Q9H293 177 aa25.11■■□□□ 1.61
PTP4A2-215ENST00000533408 RNF41Q9H4P4 317 aaPredicted RBP25.11■■□□□ 1.61
PTP4A2-215ENST00000533408 EPB41L4AQ9HCS5 686 aaPredicted RBP25.11■■□□□ 1.61
PTP4A2-215ENST00000533408 SWAP70Q9UH65 585 aa25.11■■□□□ 1.61
PTP4A2-215ENST00000533408 ANAPC4Q9UJX5 808 aa25.11■■□□□ 1.61
PTP4A2-215ENST00000533408 DDTLA6NHG4 134 aaPredicted RBP25.1■■□□□ 1.61
PTP4A2-215ENST00000533408 PTH1RQ03431 593 aa25.1■■□□□ 1.61
PTP4A2-215ENST00000533408 PDE4BQ07343 736 aa25.1■■□□□ 1.61
PTP4A2-215ENST00000533408 ZFPM1Q8IX07 1006 aa25.1■■□□□ 1.61
PTP4A2-215ENST00000533408 CDCA5Q96FF9 252 aa25.1■■□□□ 1.61
PTP4A2-215ENST00000533408 TEPSINQ96N21 525 aa25.1■■□□□ 1.61
PTP4A2-215ENST00000533408 ADM5C9JUS6 153 aa25.09■■□□□ 1.61
PTP4A2-215ENST00000533408 ZKSCAN1P17029 563 aaPredicted RBP25.09■■□□□ 1.61
PTP4A2-215ENST00000533408 PPARAQ07869 468 aa25.09■■□□□ 1.61
PTP4A2-215ENST00000533408 RBM8AQ9Y5S9 174 aaKnown RBP25.09■■□□□ 1.61
PTP4A2-215ENST00000533408 FOXP2O15409 715 aa25.08■■□□□ 1.61
PTP4A2-215ENST00000533408 FKBP1BP68106 108 aa25.08■■□□□ 1.61
PTP4A2-215ENST00000533408 NBPF12Q5TAG4 269 aaPredicted RBP25.08■■□□□ 1.61
PTP4A2-215ENST00000533408 METTL16Q86W50 562 aaKnown RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms