RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 KDM2BQ8NHM5 1336 aa7.9□□□□□ -1.15
BDNF-217ENST00000533131 SFI1A8K8P3 1242 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 MVPQ14764 893 aaKnown RBP7.89□□□□□ -1.15
BDNF-217ENST00000533131 DSTYKQ6XUX3 929 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 NYAP1Q6ZVC0 841 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 ZNF579Q8NAF0 562 aaKnown RBP7.89□□□□□ -1.15
BDNF-217ENST00000533131 SAP30BPQ9UHR5 308 aaKnown RBP7.89□□□□□ -1.15
BDNF-217ENST00000533131 PCDHGB3Q9Y5G1 929 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 H0Y3Z8 333 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 PPP4R3AQ6IN85 833 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 LLGL2Q6P1M3 1020 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 CFAP161Q6P656 301 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.89□□□□□ -1.15
BDNF-217ENST00000533131 RRN3Q9NYV6 651 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 C6orf229H3BNL8 230 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 POLR2FP61218 127 aaKnown RBP7.89□□□□□ -1.15
BDNF-217ENST00000533131 PRAG1Q86YV5 1406 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 RNF214Q8ND24 703 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 FBF1Q8TES7 1133 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 HLA-CQ95604 372 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 BARD1Q99728 777 aaKnown RBP7.89□□□□□ -1.15
BDNF-217ENST00000533131 ZBTB3Q9H5J0 574 aa7.89□□□□□ -1.15
BDNF-217ENST00000533131 LILRB3O75022 631 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 KIF20AO95235 890 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 F2P00734 622 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 G3BP1Q13283 466 aaKnown RBP eCLIP7.88□□□□□ -1.15
BDNF-217ENST00000533131 PPP2R5EQ16537 467 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 MCTP1Q6DN14 999 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 EEPD1Q7L9B9 569 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 ARHGEF25Q86VW2 580 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 SAMD14Q8IZD0 417 aaPredicted RBP7.88□□□□□ -1.15
BDNF-217ENST00000533131 HOOK2Q96ED9 719 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 CREBZFQ9NS37 354 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 MAFFQ9ULX9 164 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 ZBTB24O43167 697 aaPredicted RBP7.88□□□□□ -1.15
BDNF-217ENST00000533131 TMEM95Q3KNT9 176 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 CNTN3Q9P232 1028 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 CDC42BPAQ5VT25 1732 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 KDM4FA0A1W2PPD8 638 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 PGRP06401 933 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 MCL1Q07820 350 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 CCDC30Q5VVM6 783 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 KIAA0825Q8IV33 1275 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 RBM42Q9BTD8 480 aaKnown RBP7.88□□□□□ -1.15
BDNF-217ENST00000533131 SPON2Q9BUD6 331 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 DHX36Q9H2U1 1008 aaKnown RBP7.88□□□□□ -1.15
BDNF-217ENST00000533131 RRAGDQ9NQL2 400 aaPredicted RBP7.88□□□□□ -1.15
BDNF-217ENST00000533131 NSD3Q9BZ95 1437 aa7.88□□□□□ -1.15
BDNF-217ENST00000533131 GFPT2O94808 682 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 XRCC6P12956 609 aaKnown RBP eCLIP7.87□□□□□ -1.15
BDNF-217ENST00000533131 IL4RP24394 825 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 PRKAR2BP31323 418 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 ARHGAP29Q52LW3 1261 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 DGKHQ86XP1 1220 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 TAB3Q8N5C8 712 aaPredicted RBP7.87□□□□□ -1.15
BDNF-217ENST00000533131 LEO1Q8WVC0 666 aaPredicted RBP7.87□□□□□ -1.15
BDNF-217ENST00000533131 PLCB1Q9NQ66 1216 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 NKTRP30414 1462 aaKnown RBP7.87□□□□□ -1.15
BDNF-217ENST00000533131 SPTLC1O15269 473 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 FAM133BQ5BKY9 247 aaKnown RBP7.87□□□□□ -1.15
BDNF-217ENST00000533131 PGBD4Q96DM1 585 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 RABEP2Q9H5N1 569 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 COPRSQ9NQ92 184 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 TRMT1Q9NXH9 659 aaKnown RBP7.87□□□□□ -1.15
BDNF-217ENST00000533131 EVC2Q86UK5 1308 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 ARAP3Q8WWN8 1544 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 TRIM27P14373 513 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 PLA2G4AP47712 749 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 SARSP49591 514 aaKnown RBP7.87□□□□□ -1.15
BDNF-217ENST00000533131 ST13P50502 369 aaKnown RBP7.87□□□□□ -1.15
BDNF-217ENST00000533131 SATB1Q01826 763 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 ARSHQ5FYA8 562 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 CPLX2Q6PUV4 134 aaKnown RBP7.87□□□□□ -1.15
BDNF-217ENST00000533131 ANKRD13DQ6ZTN6 518 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 CRELD1Q96HD1 420 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 PRKD2Q9BZL6 878 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 CXXC1Q9P0U4 656 aaPredicted RBP7.87□□□□□ -1.15
BDNF-217ENST00000533131 PCDH10Q9P2E7 1040 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 SCAPERQ9BY12 1400 aa7.87□□□□□ -1.15
BDNF-217ENST00000533131 PRRT4C9JH25 899 aa7.86□□□□□ -1.15
BDNF-217ENST00000533131 ATP5J2-PTCD1G3V325 749 aa7.86□□□□□ -1.15
BDNF-217ENST00000533131 CTNNA1P35221 906 aaKnown RBP7.86□□□□□ -1.15
BDNF-217ENST00000533131 DCTN1Q14203 1278 aa7.86□□□□□ -1.15
BDNF-217ENST00000533131 CAVIN1Q6NZI2 390 aaKnown RBP7.86□□□□□ -1.15
BDNF-217ENST00000533131 ATF7IPQ6VMQ6 1270 aa7.86□□□□□ -1.15
BDNF-217ENST00000533131 PPP1R14CQ8TAE6 165 aa7.86□□□□□ -1.15
BDNF-217ENST00000533131 GRPEL1Q9HAV7 217 aa7.86□□□□□ -1.15
BDNF-217ENST00000533131 FDX1P10109 184 aa7.86□□□□□ -1.15
BDNF-217ENST00000533131 NEK2P51955 445 aa7.86□□□□□ -1.15
BDNF-217ENST00000533131 PLIN5Q00G26 463 aa7.86□□□□□ -1.15
BDNF-217ENST00000533131 SNRNP27Q8WVK2 155 aaKnown RBP7.86□□□□□ -1.15
BDNF-217ENST00000533131 TBC1D32Q96NH3 1257 aa7.86□□□□□ -1.15
BDNF-217ENST00000533131 ODF2LQ9ULJ1 636 aa7.86□□□□□ -1.15
BDNF-217ENST00000533131 BCORL1Q5H9F3 1711 aa7.86□□□□□ -1.15
BDNF-217ENST00000533131 VIL1P09327 827 aaKnown RBP7.86□□□□□ -1.15
BDNF-217ENST00000533131 FBXO45P0C2W1 286 aa7.86□□□□□ -1.15
BDNF-217ENST00000533131 MRPS35P82673 323 aaKnown RBP7.86□□□□□ -1.15
BDNF-217ENST00000533131 DAB2P98082 770 aa7.86□□□□□ -1.15
BDNF-217ENST00000533131 MRPL28Q13084 256 aaKnown RBP7.86□□□□□ -1.15
BDNF-217ENST00000533131 RILPL1Q5EBL4 403 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms