RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 FKBP1CQ5VVH2 108 aa17.59■□□□□ 0.41
NXF1-214ENST00000533048 CTR9Q6PD62 1173 aa17.59■□□□□ 0.41
NXF1-214ENST00000533048 MICALL2Q8IY33 904 aa17.59■□□□□ 0.41
NXF1-214ENST00000533048 TGFBRAP1Q8WUH2 860 aa17.59■□□□□ 0.41
NXF1-214ENST00000533048 CNOT7Q9UIV1 285 aaKnown RBP17.59■□□□□ 0.41
NXF1-214ENST00000533048 SPDYE2Q495Y8 402 aa17.58■□□□□ 0.4
NXF1-214ENST00000533048 STOX1Q6ZVD7 989 aa17.58■□□□□ 0.4
NXF1-214ENST00000533048 L3MBTL3Q96JM7 780 aaPredicted RBP17.58■□□□□ 0.4
NXF1-214ENST00000533048 SHTN1A0MZ66 631 aa17.57■□□□□ 0.4
NXF1-214ENST00000533048 USP17L12C9JPN9 530 aa17.57■□□□□ 0.4
NXF1-214ENST00000533048 USP17L21D6R901 530 aa17.57■□□□□ 0.4
NXF1-214ENST00000533048 PCP11498 1178 aaKnown RBP17.57■□□□□ 0.4
NXF1-214ENST00000533048 PPARAQ07869 468 aa17.57■□□□□ 0.4
NXF1-214ENST00000533048 ADCK5Q3MIX3 580 aa17.57■□□□□ 0.4
NXF1-214ENST00000533048 C12orf60Q5U649 245 aa17.57■□□□□ 0.4
NXF1-214ENST00000533048 TBC1D10CQ8IV04 446 aa17.57■□□□□ 0.4
NXF1-214ENST00000533048 MAPKAPK5Q8IW41 473 aa17.57■□□□□ 0.4
NXF1-214ENST00000533048 STAG1Q8WVM7 1258 aa17.57■□□□□ 0.4
NXF1-214ENST00000533048 TDRD3Q9H7E2 651 aaKnown RBP17.57■□□□□ 0.4
NXF1-214ENST00000533048 ZSWIM6Q9HCJ5 1215 aa17.57■□□□□ 0.4
NXF1-214ENST00000533048 DDX4Q9NQI0 724 aaKnown RBP17.57■□□□□ 0.4
NXF1-214ENST00000533048 MCM9Q9NXL9 1143 aa17.57■□□□□ 0.4
NXF1-214ENST00000533048 ATRNL1Q5VV63 1379 aa17.56■□□□□ 0.4
NXF1-214ENST00000533048 E7EWF7 191 aa17.56■□□□□ 0.4
NXF1-214ENST00000533048 WNT10BO00744 389 aa17.56■□□□□ 0.4
NXF1-214ENST00000533048 ENTPD3O75355 529 aa17.56■□□□□ 0.4
NXF1-214ENST00000533048 FGRP09769 529 aa17.56■□□□□ 0.4
NXF1-214ENST00000533048 PSMA5P28066 241 aa17.56■□□□□ 0.4
NXF1-214ENST00000533048 HAND2P61296 217 aa17.56■□□□□ 0.4
NXF1-214ENST00000533048 NFIAQ12857 509 aa17.56■□□□□ 0.4
NXF1-214ENST00000533048 OSBPL5Q9H0X9 879 aaPredicted RBP17.56■□□□□ 0.4
NXF1-214ENST00000533048 FAM198AQ9UFP1 575 aa17.56■□□□□ 0.4
NXF1-214ENST00000533048 TAOK2Q9UL54 1235 aa17.56■□□□□ 0.4
NXF1-214ENST00000533048 SIPA1L1O43166 1804 aa17.56■□□□□ 0.4
NXF1-214ENST00000533048 SCN4AP35499 1836 aa17.56■□□□□ 0.4
NXF1-214ENST00000533048 WDR90Q96KV7 1748 aa17.55■□□□□ 0.4
NXF1-214ENST00000533048 H7C1D1 291 aa17.55■□□□□ 0.4
NXF1-214ENST00000533048 DDNO94850 711 aaPredicted RBP17.55■□□□□ 0.4
NXF1-214ENST00000533048 EGFRP00533 1210 aa17.55■□□□□ 0.4
NXF1-214ENST00000533048 HMGB1P09429 215 aaKnown RBP17.55■□□□□ 0.4
NXF1-214ENST00000533048 NT5C2P49902 561 aa17.55■□□□□ 0.4
NXF1-214ENST00000533048 AKNAD1Q5T1N1 836 aa17.55■□□□□ 0.4
NXF1-214ENST00000533048 JAKMIP1Q96N16 626 aaKnown RBP17.55■□□□□ 0.4
NXF1-214ENST00000533048 TMOD2Q9NZR1 351 aa17.55■□□□□ 0.4
NXF1-214ENST00000533048 ZNF70Q9UC06 446 aaPredicted RBP17.55■□□□□ 0.4
NXF1-214ENST00000533048 MYO1BO43795 1136 aa17.54■□□□□ 0.4
NXF1-214ENST00000533048 KIF4BQ2VIQ3 1234 aa17.54■□□□□ 0.4
NXF1-214ENST00000533048 DPY19L2Q6NUT2 758 aa17.54■□□□□ 0.4
NXF1-214ENST00000533048 AMOTL1Q8IY63 956 aa17.54■□□□□ 0.4
NXF1-214ENST00000533048 NEK1Q96PY6 1258 aa17.54■□□□□ 0.4
NXF1-214ENST00000533048 RNF41Q9H4P4 317 aaPredicted RBP17.54■□□□□ 0.4
NXF1-214ENST00000533048 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.54■□□□□ 0.4
NXF1-214ENST00000533048 WDR19Q8NEZ3 1342 aa17.53■□□□□ 0.4
NXF1-214ENST00000533048 CYP2D7A0A087X1C5 515 aa17.53■□□□□ 0.4
NXF1-214ENST00000533048 GLTPD2A6NH11 291 aa17.53■□□□□ 0.4
NXF1-214ENST00000533048 ORC4O43929 436 aa17.53■□□□□ 0.4
NXF1-214ENST00000533048 CASTP20810 708 aaKnown RBP17.53■□□□□ 0.4
NXF1-214ENST00000533048 ANP32AP39687 249 aaKnown RBP17.53■□□□□ 0.4
NXF1-214ENST00000533048 NBPF9Q3BBW0 867 aa17.53■□□□□ 0.4
NXF1-214ENST00000533048 RUFY3Q7L099 469 aa17.53■□□□□ 0.4
NXF1-214ENST00000533048 FAM83AQ86UY5 434 aa17.53■□□□□ 0.4
NXF1-214ENST00000533048 TTC14Q96N46 770 aa17.53■□□□□ 0.4
NXF1-214ENST00000533048 EHD4Q9H223 541 aa17.53■□□□□ 0.4
NXF1-214ENST00000533048 DHX36Q9H2U1 1008 aaKnown RBP17.53■□□□□ 0.4
NXF1-214ENST00000533048 CNNM2Q9H8M5 875 aa17.53■□□□□ 0.4
NXF1-214ENST00000533048 TACC3Q9Y6A5 838 aa17.53■□□□□ 0.4
NXF1-214ENST00000533048 CNTNAP1P78357 1384 aa17.53■□□□□ 0.4
NXF1-214ENST00000533048 NEDD4P46934 1319 aa17.52■□□□□ 0.4
NXF1-214ENST00000533048 MINDY4BA8MYZ0 360 aa17.52■□□□□ 0.4
NXF1-214ENST00000533048 SLC3A2P08195 630 aaKnown RBP17.52■□□□□ 0.4
NXF1-214ENST00000533048 CYP2D6P10635 497 aa17.52■□□□□ 0.4
NXF1-214ENST00000533048 RPS6KB1P23443 525 aa17.52■□□□□ 0.4
NXF1-214ENST00000533048 EPS15P42566 896 aa17.52■□□□□ 0.4
NXF1-214ENST00000533048 CACNB3P54284 484 aa17.52■□□□□ 0.4
NXF1-214ENST00000533048 CTDSPL2Q05D32 466 aa17.52■□□□□ 0.4
NXF1-214ENST00000533048 PICALMQ13492 652 aa17.52■□□□□ 0.4
NXF1-214ENST00000533048 BLOC1S2Q6QNY1 142 aa17.52■□□□□ 0.4
NXF1-214ENST00000533048 SAMD7Q7Z3H4 446 aa17.52■□□□□ 0.4
NXF1-214ENST00000533048 TTC6Q86TZ1 520 aa17.52■□□□□ 0.4
NXF1-214ENST00000533048 MB21D2Q8IYB1 491 aaPredicted RBP17.52■□□□□ 0.4
NXF1-214ENST00000533048 NCOA7Q8NI08 942 aa17.52■□□□□ 0.4
NXF1-214ENST00000533048 SNX21Q969T3 373 aa17.52■□□□□ 0.4
NXF1-214ENST00000533048 UPF3BQ9BZI7 483 aaKnown RBP17.52■□□□□ 0.4
NXF1-214ENST00000533048 ALDH8A1Q9H2A2 487 aaPredicted RBP17.52■□□□□ 0.4
NXF1-214ENST00000533048 CYP46A1Q9Y6A2 500 aa17.52■□□□□ 0.4
NXF1-214ENST00000533048 CLRN2A0PK11 232 aa17.51■□□□□ 0.39
NXF1-214ENST00000533048 SMIM22K7EJ46 135 aa17.51■□□□□ 0.39
NXF1-214ENST00000533048 POLR3DP05423 398 aaPredicted RBP17.51■□□□□ 0.39
NXF1-214ENST00000533048 LMOD1P29536 600 aaPredicted RBP17.51■□□□□ 0.39
NXF1-214ENST00000533048 PLCD1P51178 756 aa17.51■□□□□ 0.39
NXF1-214ENST00000533048 NEK4P51957 841 aa17.51■□□□□ 0.39
NXF1-214ENST00000533048 EVX2Q03828 476 aa17.51■□□□□ 0.39
NXF1-214ENST00000533048 GABPAQ06546 454 aa17.51■□□□□ 0.39
NXF1-214ENST00000533048 COL9A3Q14050 684 aaPredicted RBP17.51■□□□□ 0.39
NXF1-214ENST00000533048 TBC1D10BQ4KMP7 808 aaPredicted RBP17.51■□□□□ 0.39
NXF1-214ENST00000533048 MFSD6Q6ZSS7 791 aa17.51■□□□□ 0.39
NXF1-214ENST00000533048 C16orf86Q6ZW13 317 aa17.51■□□□□ 0.39
NXF1-214ENST00000533048 METTL16Q86W50 562 aaKnown RBP17.51■□□□□ 0.39
NXF1-214ENST00000533048 FBXL16Q8N461 479 aa17.51■□□□□ 0.39
NXF1-214ENST00000533048 TRPM4Q8TD43 1214 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms