RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 LAMA3Q16787 3333 aa18.1■□□□□ 0.49
CDC27-209ENST00000532893 A0A0G2JLL6 359 aaPredicted RBP18.09■□□□□ 0.49
CDC27-209ENST00000532893 A0A1W2PPC1 479 aa18.09■□□□□ 0.49
CDC27-209ENST00000532893 PHF20L1A8MW92 1017 aa18.09■□□□□ 0.49
CDC27-209ENST00000532893 SLC5A1P13866 664 aa18.09■□□□□ 0.49
CDC27-209ENST00000532893 PRDX5P30044 214 aa18.09■□□□□ 0.49
CDC27-209ENST00000532893 PRRT2Q7Z6L0 340 aaPredicted RBP18.09■□□□□ 0.49
CDC27-209ENST00000532893 TNPO2O14787 897 aaKnown RBP18.08■□□□□ 0.48
CDC27-209ENST00000532893 PTPRAP18433 802 aa18.08■□□□□ 0.48
CDC27-209ENST00000532893 SCYL3Q8IZE3 742 aa18.08■□□□□ 0.48
CDC27-209ENST00000532893 PXYLP1Q8TE99 480 aa18.08■□□□□ 0.48
CDC27-209ENST00000532893 LPIN2Q92539 896 aa18.08■□□□□ 0.48
CDC27-209ENST00000532893 PICK1Q9NRD5 415 aa18.08■□□□□ 0.48
CDC27-209ENST00000532893 TAOK2Q9UL54 1235 aa18.08■□□□□ 0.48
CDC27-209ENST00000532893 AFG3L2Q9Y4W6 797 aa18.08■□□□□ 0.48
CDC27-209ENST00000532893 LDHBP07195 334 aaKnown RBP18.07■□□□□ 0.48
CDC27-209ENST00000532893 PAWRQ96IZ0 340 aaKnown RBP18.07■□□□□ 0.48
CDC27-209ENST00000532893 MRS2Q9HD23 443 aa18.07■□□□□ 0.48
CDC27-209ENST00000532893 EYA2O00167 538 aa18.06■□□□□ 0.48
CDC27-209ENST00000532893 RGS3P49796 1198 aa18.06■□□□□ 0.48
CDC27-209ENST00000532893 IRF5Q13568 498 aa18.06■□□□□ 0.48
CDC27-209ENST00000532893 SMCR8Q8TEV9 937 aaPredicted RBP18.06■□□□□ 0.48
CDC27-209ENST00000532893 USP44Q9H0E7 712 aa18.06■□□□□ 0.48
CDC27-209ENST00000532893 PAK6Q9NQU5 681 aaPredicted RBP18.06■□□□□ 0.48
CDC27-209ENST00000532893 U3KPZ7 1027 aaPredicted RBP18.06■□□□□ 0.48
CDC27-209ENST00000532893 SLURP2P0DP57 97 aa18.05■□□□□ 0.48
CDC27-209ENST00000532893 CAPN2P17655 700 aa18.05■□□□□ 0.48
CDC27-209ENST00000532893 ZSCAN29Q8IWY8 852 aaPredicted RBP18.05■□□□□ 0.48
CDC27-209ENST00000532893 DIS3LQ8TF46 1054 aaKnown RBP18.05■□□□□ 0.48
CDC27-209ENST00000532893 CRISPLD2Q9H0B8 497 aa18.05■□□□□ 0.48
CDC27-209ENST00000532893 SLC45A1Q9Y2W3 748 aa18.05■□□□□ 0.48
CDC27-209ENST00000532893 LRRFIP2Q9Y608 721 aaKnown RBP18.05■□□□□ 0.48
CDC27-209ENST00000532893 CUL9Q8IWT3 2517 aa18.04■□□□□ 0.48
CDC27-209ENST00000532893 TRIM75PA6NK02 468 aa18.04■□□□□ 0.48
CDC27-209ENST00000532893 RFX5P48382 616 aaPredicted RBP18.04■□□□□ 0.48
CDC27-209ENST00000532893 SH3BP5LQ7L8J4 393 aa18.04■□□□□ 0.48
CDC27-209ENST00000532893 ATG9AQ7Z3C6 839 aa18.04■□□□□ 0.48
CDC27-209ENST00000532893 NECAB2Q7Z6G3 386 aa18.04■□□□□ 0.48
CDC27-209ENST00000532893 ANKRD13CQ8N6S4 541 aa18.04■□□□□ 0.48
CDC27-209ENST00000532893 COA7Q96BR5 231 aa18.04■□□□□ 0.48
CDC27-209ENST00000532893 GNL3LQ9NVN8 582 aaKnown RBP18.04■□□□□ 0.48
CDC27-209ENST00000532893 ATRNL1Q5VV63 1379 aa18.04■□□□□ 0.48
CDC27-209ENST00000532893 ENTPD3O75355 529 aa18.03■□□□□ 0.48
CDC27-209ENST00000532893 CCDC84Q86UT8 332 aaPredicted RBP18.03■□□□□ 0.48
CDC27-209ENST00000532893 MRPL50Q8N5N7 158 aaKnown RBP18.03■□□□□ 0.48
CDC27-209ENST00000532893 GDF15Q99988 308 aa18.03■□□□□ 0.48
CDC27-209ENST00000532893 IDI2Q9BXS1 227 aa18.03■□□□□ 0.48
CDC27-209ENST00000532893 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.03■□□□□ 0.48
CDC27-209ENST00000532893 ZMYND8Q9ULU4 1186 aaPredicted RBP18.03■□□□□ 0.48
CDC27-209ENST00000532893 MGAMO43451 1857 aa18.03■□□□□ 0.48
CDC27-209ENST00000532893 DDTLA6NHG4 134 aaPredicted RBP18.02■□□□□ 0.48
CDC27-209ENST00000532893 CTNND1O60716 968 aaKnown RBP18.02■□□□□ 0.48
CDC27-209ENST00000532893 MAP3K10Q02779 954 aa18.02■□□□□ 0.48
CDC27-209ENST00000532893 ATP2B3Q16720 1220 aa18.02■□□□□ 0.48
CDC27-209ENST00000532893 C7orf61Q8IZ16 206 aa18.02■□□□□ 0.48
CDC27-209ENST00000532893 DOCK3Q8IZD9 2030 aa18.02■□□□□ 0.48
CDC27-209ENST00000532893 PHKA1P46020 1223 aa18.01■□□□□ 0.47
CDC27-209ENST00000532893 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.01■□□□□ 0.47
CDC27-209ENST00000532893 SIL1Q9H173 461 aa18.01■□□□□ 0.47
CDC27-209ENST00000532893 CEP126Q9P2H0 1117 aa18.01■□□□□ 0.47
CDC27-209ENST00000532893 DENND2AQ9ULE3 1009 aa18.01■□□□□ 0.47
CDC27-209ENST00000532893 AGTPBP1Q9UPW5 1226 aa18.01■□□□□ 0.47
CDC27-209ENST00000532893 SALL1Q9NSC2 1324 aa18■□□□□ 0.47
CDC27-209ENST00000532893 BMP8BP34820 402 aa18■□□□□ 0.47
CDC27-209ENST00000532893 TREML2Q5T2D2 321 aa18■□□□□ 0.47
CDC27-209ENST00000532893 DEFB123Q8N688 67 aa18■□□□□ 0.47
CDC27-209ENST00000532893 DDX4Q9NQI0 724 aaKnown RBP18■□□□□ 0.47
CDC27-209ENST00000532893 MNX1P50219 401 aaPredicted RBP17.99■□□□□ 0.47
CDC27-209ENST00000532893 PICALMQ13492 652 aa17.99■□□□□ 0.47
CDC27-209ENST00000532893 FAM110CQ1W6H9 321 aa17.99■□□□□ 0.47
CDC27-209ENST00000532893 Q7L0L9 218 aa17.99■□□□□ 0.47
CDC27-209ENST00000532893 PTPRCP08575 1304 aa17.98■□□□□ 0.47
CDC27-209ENST00000532893 SYN1P17600 705 aa17.98■□□□□ 0.47
CDC27-209ENST00000532893 TRIM32Q13049 653 aa17.98■□□□□ 0.47
CDC27-209ENST00000532893 ANKLE1Q8NAG6 615 aa17.98■□□□□ 0.47
CDC27-209ENST00000532893 PNMA3Q9UL41 463 aa17.98■□□□□ 0.47
CDC27-209ENST00000532893 GAKO14976 1311 aa17.98■□□□□ 0.47
CDC27-209ENST00000532893 SEMA3EO15041 775 aa17.97■□□□□ 0.47
CDC27-209ENST00000532893 HMGCRP04035 888 aa17.97■□□□□ 0.47
CDC27-209ENST00000532893 SPP2Q13103 211 aa17.97■□□□□ 0.47
CDC27-209ENST00000532893 GPR153Q6NV75 609 aa17.97■□□□□ 0.47
CDC27-209ENST00000532893 DZIP1Q86YF9 867 aaKnown RBP17.97■□□□□ 0.47
CDC27-209ENST00000532893 ZGPATQ8N5A5 531 aaKnown RBP17.97■□□□□ 0.47
CDC27-209ENST00000532893 NBPF3Q9H094 633 aa17.97■□□□□ 0.47
CDC27-209ENST00000532893 HMX1Q9NP08 348 aaPredicted RBP17.97■□□□□ 0.47
CDC27-209ENST00000532893 ABCF2Q9UG63 623 aa17.97■□□□□ 0.47
CDC27-209ENST00000532893 GJD2Q9UKL4 321 aa17.97■□□□□ 0.47
CDC27-209ENST00000532893 RPTORQ8N122 1335 aa17.97■□□□□ 0.47
CDC27-209ENST00000532893 FAM196BA6NMK8 535 aa17.96■□□□□ 0.47
CDC27-209ENST00000532893 ADORA1P30542 326 aa17.96■□□□□ 0.47
CDC27-209ENST00000532893 BTDP43251 543 aa17.96■□□□□ 0.47
CDC27-209ENST00000532893 MAGEA10P43363 369 aaPredicted RBP17.96■□□□□ 0.47
CDC27-209ENST00000532893 SLF2Q8IX21 1173 aa17.96■□□□□ 0.47
CDC27-209ENST00000532893 FAM163AQ96GL9 167 aaPredicted RBP17.96■□□□□ 0.47
CDC27-209ENST00000532893 FBXO3Q9UK99 471 aa17.96■□□□□ 0.47
CDC27-209ENST00000532893 MYH13Q9UKX3 1938 aa17.96■□□□□ 0.47
CDC27-209ENST00000532893 RFX7Q2KHR2 1363 aa17.95■□□□□ 0.46
CDC27-209ENST00000532893 CIAO1O76071 339 aa17.95■□□□□ 0.46
CDC27-209ENST00000532893 GCLCP48506 637 aaPredicted RBP17.95■□□□□ 0.46
CDC27-209ENST00000532893 CCDC102BQ68D86 513 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms