RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 TTF1Q15361 905 aaPredicted RBP17.23■□□□□ 0.35
SSH3-210ENST00000532881 NUP133Q8WUM0 1156 aa17.23■□□□□ 0.35
SSH3-210ENST00000532881 SLC12A7Q9Y666 1083 aa17.23■□□□□ 0.35
SSH3-210ENST00000532881 GOLGB1Q14789 3259 aaKnown RBP17.23■□□□□ 0.35
SSH3-210ENST00000532881 NLRP12P59046 1061 aa17.23■□□□□ 0.35
SSH3-210ENST00000532881 CCDC112Q8NEF3 446 aa17.23■□□□□ 0.35
SSH3-210ENST00000532881 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.23■□□□□ 0.35
SSH3-210ENST00000532881 ITGB4P16144 1822 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 CYP2D7A0A087X1C5 515 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 SMTNL1A8MU46 457 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 PATL2C9JE40 543 aaKnown RBP17.22■□□□□ 0.35
SSH3-210ENST00000532881 RBM6P78332 1123 aaKnown RBP17.22■□□□□ 0.35
SSH3-210ENST00000532881 PTPN14Q15678 1187 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 ZNF827Q17R98 1081 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 ZNF34Q8IZ26 560 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 ANKRD7Q92527 254 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 ABCF2Q9UG63 623 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 SLC4A4Q9Y6R1 1079 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 BCL9O00512 1426 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 MINDY4BA8MYZ0 360 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 TMEM232C9JQI7 657 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 TDO2P48775 406 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 PDE4BQ07343 736 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 E4F1Q66K89 784 aaPredicted RBP17.22■□□□□ 0.35
SSH3-210ENST00000532881 METTL16Q86W50 562 aaKnown RBP17.22■□□□□ 0.35
SSH3-210ENST00000532881 CCAR2Q8N163 923 aaKnown RBP17.22■□□□□ 0.35
SSH3-210ENST00000532881 PDILTQ8N807 584 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 OXER1Q8TDS5 423 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 CHMP4CQ96CF2 233 aa17.22■□□□□ 0.35
SSH3-210ENST00000532881 FAM205CA6NFA0 338 aa17.21■□□□□ 0.35
SSH3-210ENST00000532881 EXOC5O00471 708 aa17.21■□□□□ 0.35
SSH3-210ENST00000532881 BMP6P22004 513 aa17.21■□□□□ 0.35
SSH3-210ENST00000532881 TOB1P50616 345 aaPredicted RBP17.21■□□□□ 0.35
SSH3-210ENST00000532881 MTERF4Q7Z6M4 381 aaKnown RBP17.21■□□□□ 0.35
SSH3-210ENST00000532881 LRRN4CLQ8ND94 238 aa17.21■□□□□ 0.35
SSH3-210ENST00000532881 ZNF215Q9UL58 517 aaPredicted RBP17.21■□□□□ 0.35
SSH3-210ENST00000532881 USP49Q70CQ1 688 aa17.21■□□□□ 0.35
SSH3-210ENST00000532881 COL4A1P02462 1669 aa17.21■□□□□ 0.34
SSH3-210ENST00000532881 PRDM1O75626 825 aa17.2■□□□□ 0.34
SSH3-210ENST00000532881 FANCCQ00597 558 aa17.2■□□□□ 0.34
SSH3-210ENST00000532881 MFSD6Q6ZSS7 791 aa17.2■□□□□ 0.34
SSH3-210ENST00000532881 NYAP1Q6ZVC0 841 aa17.2■□□□□ 0.34
SSH3-210ENST00000532881 TICAM2Q86XR7 235 aa17.2■□□□□ 0.34
SSH3-210ENST00000532881 NUP98P52948 1817 aa17.2■□□□□ 0.34
SSH3-210ENST00000532881 GYG1P46976 350 aa17.2■□□□□ 0.34
SSH3-210ENST00000532881 MAP3K12Q12852 859 aa17.2■□□□□ 0.34
SSH3-210ENST00000532881 SLC4A8Q2Y0W8 1093 aa17.2■□□□□ 0.34
SSH3-210ENST00000532881 LRP2BPQ9P2M1 347 aa17.2■□□□□ 0.34
SSH3-210ENST00000532881 PCDHA5Q9Y5H7 936 aa17.2■□□□□ 0.34
SSH3-210ENST00000532881 PRR29P0C7W0 189 aa17.19■□□□□ 0.34
SSH3-210ENST00000532881 SLC5A1P13866 664 aa17.19■□□□□ 0.34
SSH3-210ENST00000532881 ATP6V1AP38606 617 aa17.19■□□□□ 0.34
SSH3-210ENST00000532881 SSRP1Q08945 709 aaKnown RBP17.19■□□□□ 0.34
SSH3-210ENST00000532881 AKNAD1Q5T1N1 836 aa17.19■□□□□ 0.34
SSH3-210ENST00000532881 INTS5Q6P9B9 1019 aaKnown RBP17.19■□□□□ 0.34
SSH3-210ENST00000532881 C3orf67Q6ZVT6 689 aa17.19■□□□□ 0.34
SSH3-210ENST00000532881 SHISA4Q96DD7 197 aa17.19■□□□□ 0.34
SSH3-210ENST00000532881 ZNF512BQ96KM6 892 aaPredicted RBP17.19■□□□□ 0.34
SSH3-210ENST00000532881 FANCLQ9NW38 375 aa17.19■□□□□ 0.34
SSH3-210ENST00000532881 HPSEQ9Y251 543 aa17.19■□□□□ 0.34
SSH3-210ENST00000532881 PCDHB6Q9Y5E3 794 aa17.19■□□□□ 0.34
SSH3-210ENST00000532881 ABCA3Q99758 1704 aa17.19■□□□□ 0.34
SSH3-210ENST00000532881 ADAMTS2O95450 1211 aa17.19■□□□□ 0.34
SSH3-210ENST00000532881 UQCRFS1P1P0C7P4 283 aa17.19■□□□□ 0.34
SSH3-210ENST00000532881 TRIM29Q14134 588 aa17.19■□□□□ 0.34
SSH3-210ENST00000532881 DIS3L2Q8IYB7 885 aaKnown RBP17.19■□□□□ 0.34
SSH3-210ENST00000532881 DDX60Q8IY21 1712 aaKnown RBP17.18■□□□□ 0.34
SSH3-210ENST00000532881 CASP1P29466 404 aa17.18■□□□□ 0.34
SSH3-210ENST00000532881 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
SSH3-210ENST00000532881 TRMT44Q8IYL2 757 aaKnown RBP17.18■□□□□ 0.34
SSH3-210ENST00000532881 CCDC24Q8N4L8 307 aa17.18■□□□□ 0.34
SSH3-210ENST00000532881 TMEM87BQ96K49 555 aa17.18■□□□□ 0.34
SSH3-210ENST00000532881 IL6STP40189 918 aaPredicted RBP17.18■□□□□ 0.34
SSH3-210ENST00000532881 NOM1Q5C9Z4 860 aaKnown RBP17.18■□□□□ 0.34
SSH3-210ENST00000532881 CNNM3Q8NE01 707 aa17.18■□□□□ 0.34
SSH3-210ENST00000532881 TMX1Q9H3N1 280 aa17.18■□□□□ 0.34
SSH3-210ENST00000532881 KCNH3Q9ULD8 1083 aa17.18■□□□□ 0.34
SSH3-210ENST00000532881 NIP7Q9Y221 180 aaKnown RBP eCLIP17.18■□□□□ 0.34
SSH3-210ENST00000532881 LRP6O75581 1613 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 CDKL5O76039 1030 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 SERPINC1P01008 464 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 CHRNDQ07001 517 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 ITPK1Q13572 414 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 RESP18Q5W5W9 173 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 CPLX2Q6PUV4 134 aaKnown RBP17.17■□□□□ 0.34
SSH3-210ENST00000532881 SYT10Q6XYQ8 523 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 MROH5Q6ZUA9 1318 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 SGMS1Q86VZ5 419 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 WDR19Q8NEZ3 1342 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 ABCC12Q96J65 1359 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 MYH3P11055 1940 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 ATRNO75882 1429 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 DYNLL1P63167 89 aaKnown RBP17.17■□□□□ 0.34
SSH3-210ENST00000532881 EARS2Q5JPH6 523 aaKnown RBP17.17■□□□□ 0.34
SSH3-210ENST00000532881 BICDL1Q6ZP65 573 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 JAG2Q9Y219 1238 aa17.17■□□□□ 0.34
SSH3-210ENST00000532881 WNT7AO00755 349 aa17.16■□□□□ 0.34
SSH3-210ENST00000532881 POLR2DO15514 142 aaKnown RBP17.16■□□□□ 0.34
SSH3-210ENST00000532881 EIF5P55010 431 aaKnown RBP17.16■□□□□ 0.34
SSH3-210ENST00000532881 UBASH3AP57075 661 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms