RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 TRIM29Q14134 588 aa27.33■■□□□ 1.97
SORL1-210ENST00000532451 DNTTIP2Q5QJE6 756 aaKnown RBP27.33■■□□□ 1.97
SORL1-210ENST00000532451 ADGRA1Q86SQ6 560 aa27.33■■□□□ 1.97
SORL1-210ENST00000532451 RNF41Q9H4P4 317 aaPredicted RBP27.33■■□□□ 1.97
SORL1-210ENST00000532451 ABCF2Q9UG63 623 aa27.33■■□□□ 1.97
SORL1-210ENST00000532451 GNL2Q13823 731 aaKnown RBP27.33■■□□□ 1.97
SORL1-210ENST00000532451 SLC26A6Q9BXS9 759 aa27.33■■□□□ 1.97
SORL1-210ENST00000532451 RAI14Q9P0K7 980 aa27.33■■□□□ 1.97
SORL1-210ENST00000532451 RGL2O15211 777 aa27.32■■□□□ 1.96
SORL1-210ENST00000532451 FMNL1O95466 1100 aaPredicted RBP27.32■■□□□ 1.96
SORL1-210ENST00000532451 CMA1P23946 247 aa27.32■■□□□ 1.96
SORL1-210ENST00000532451 CDC25BP30305 580 aa27.32■■□□□ 1.96
SORL1-210ENST00000532451 WTAPQ15007 396 aa27.32■■□□□ 1.96
SORL1-210ENST00000532451 CCDC186Q7Z3E2 898 aa27.32■■□□□ 1.96
SORL1-210ENST00000532451 CEP57L1Q8IYX8 460 aa27.32■■□□□ 1.96
SORL1-210ENST00000532451 ERCC4Q92889 916 aaPredicted RBP27.32■■□□□ 1.96
SORL1-210ENST00000532451 COL1A1P02452 1464 aaPredicted RBP27.32■■□□□ 1.96
SORL1-210ENST00000532451 A0A087WWV3 80 aa27.32■■□□□ 1.96
SORL1-210ENST00000532451 BECN2A8MW95 431 aa27.32■■□□□ 1.96
SORL1-210ENST00000532451 IFNAR1P17181 557 aa27.32■■□□□ 1.96
SORL1-210ENST00000532451 U2AF2P26368 475 aaKnown RBP eCLIP27.32■■□□□ 1.96
SORL1-210ENST00000532451 PPARAQ07869 468 aa27.32■■□□□ 1.96
SORL1-210ENST00000532451 DHX40Q8IX18 779 aaKnown RBP27.32■■□□□ 1.96
SORL1-210ENST00000532451 MINPP1Q9UNW1 487 aa27.32■■□□□ 1.96
SORL1-210ENST00000532451 UQCRHLA0A096LP55 91 aa27.31■■□□□ 1.96
SORL1-210ENST00000532451 MAGEB6P1A0A0J9YX57 407 aa27.31■■□□□ 1.96
SORL1-210ENST00000532451 UQCRHP07919 91 aa27.31■■□□□ 1.96
SORL1-210ENST00000532451 KCNQ4P56696 695 aa27.31■■□□□ 1.96
SORL1-210ENST00000532451 ZKSCAN3Q9BRR0 538 aa27.31■■□□□ 1.96
SORL1-210ENST00000532451 KIAA1468Q9P260 1216 aa27.31■■□□□ 1.96
SORL1-210ENST00000532451 ERICH2A1L162 156 aa27.31■■□□□ 1.96
SORL1-210ENST00000532451 CAVIN4Q5BKX8 364 aa27.31■■□□□ 1.96
SORL1-210ENST00000532451 SLC10A5Q5PT55 438 aa27.31■■□□□ 1.96
SORL1-210ENST00000532451 BICDL1Q6ZP65 573 aa27.31■■□□□ 1.96
SORL1-210ENST00000532451 WASF1Q92558 559 aa27.31■■□□□ 1.96
SORL1-210ENST00000532451 SCN7AQ01118 1682 aa27.3■■□□□ 1.96
SORL1-210ENST00000532451 WTIPA6NIX2 430 aaPredicted RBP27.3■■□□□ 1.96
SORL1-210ENST00000532451 WDHD1O75717 1129 aaPredicted RBP27.3■■□□□ 1.96
SORL1-210ENST00000532451 ZNF202O95125 648 aa27.3■■□□□ 1.96
SORL1-210ENST00000532451 PIP4K2BP78356 416 aa27.3■■□□□ 1.96
SORL1-210ENST00000532451 TBC1D9BQ66K14 1250 aa27.3■■□□□ 1.96
SORL1-210ENST00000532451 NAT10Q9H0A0 1025 aaKnown RBP27.3■■□□□ 1.96
SORL1-210ENST00000532451 CLIP2Q9UDT6 1046 aa27.3■■□□□ 1.96
SORL1-210ENST00000532451 TAOK2Q9UL54 1235 aa27.3■■□□□ 1.96
SORL1-210ENST00000532451 PPP6R2O75170 966 aa27.29■■□□□ 1.96
SORL1-210ENST00000532451 PFKFB1P16118 471 aa27.29■■□□□ 1.96
SORL1-210ENST00000532451 GTF2E1P29083 439 aaPredicted RBP27.29■■□□□ 1.96
SORL1-210ENST00000532451 MARCKSP29966 332 aaPredicted RBP27.29■■□□□ 1.96
SORL1-210ENST00000532451 RTN1Q16799 776 aa27.29■■□□□ 1.96
SORL1-210ENST00000532451 TMTC2Q8N394 836 aa27.29■■□□□ 1.96
SORL1-210ENST00000532451 SDR42E1Q8WUS8 393 aa27.29■■□□□ 1.96
SORL1-210ENST00000532451 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.29■■□□□ 1.96
SORL1-210ENST00000532451 BCL2L12Q9HB09 334 aa27.29■■□□□ 1.96
SORL1-210ENST00000532451 CASZ1Q86V15 1759 aa27.29■■□□□ 1.96
SORL1-210ENST00000532451 PTPAQ15257 358 aa27.29■■□□□ 1.96
SORL1-210ENST00000532451 STK11IPQ8N1F8 1099 aa27.29■■□□□ 1.96
SORL1-210ENST00000532451 JMYQ8N9B5 988 aa27.29■■□□□ 1.96
SORL1-210ENST00000532451 CELF1Q92879 486 aaKnown RBP27.29■■□□□ 1.96
SORL1-210ENST00000532451 NRBP1Q9UHY1 535 aa27.29■■□□□ 1.96
SORL1-210ENST00000532451 ANAPC4Q9UJX5 808 aa27.29■■□□□ 1.96
SORL1-210ENST00000532451 MROH7-TTC4A0A0A0MT08 1334 aa27.28■■□□□ 1.96
SORL1-210ENST00000532451 UBE2Q2LH0YL09 131 aa27.28■■□□□ 1.96
SORL1-210ENST00000532451 MAP3K14Q99558 947 aa27.28■■□□□ 1.96
SORL1-210ENST00000532451 RIOK1Q9BRS2 568 aaKnown RBP27.28■■□□□ 1.96
SORL1-210ENST00000532451 TAF1P21675 1872 aa27.28■■□□□ 1.96
SORL1-210ENST00000532451 RCAN1P53805 252 aa27.28■■□□□ 1.96
SORL1-210ENST00000532451 MRFAP1L1Q96HT8 127 aa27.28■■□□□ 1.96
SORL1-210ENST00000532451 FAM84BQ96KN1 310 aaPredicted RBP27.28■■□□□ 1.96
SORL1-210ENST00000532451 VPS72Q15906 364 aa27.27■■□□□ 1.96
SORL1-210ENST00000532451 CACNA1SQ13698 1873 aa27.27■■□□□ 1.96
SORL1-210ENST00000532451 MINDY4BA8MYZ0 360 aa27.26■■□□□ 1.96
SORL1-210ENST00000532451 SLC3A2P08195 630 aaKnown RBP27.26■■□□□ 1.96
SORL1-210ENST00000532451 TRIM22Q8IYM9 498 aa27.26■■□□□ 1.96
SORL1-210ENST00000532451 AOPEPQ8N6M6 819 aa27.26■■□□□ 1.96
SORL1-210ENST00000532451 ZRSR1Q15695 479 aaKnown RBP27.26■■□□□ 1.95
SORL1-210ENST00000532451 SMIM5Q71RC9 77 aa27.26■■□□□ 1.95
SORL1-210ENST00000532451 NYXQ9GZU5 481 aa27.26■■□□□ 1.95
SORL1-210ENST00000532451 CCDC196A0A1B0GTZ2 297 aa27.25■■□□□ 1.95
SORL1-210ENST00000532451 GUCY1A2P33402 732 aa27.25■■□□□ 1.95
SORL1-210ENST00000532451 RC3H1Q5TC82 1133 aaKnown RBP27.25■■□□□ 1.95
SORL1-210ENST00000532451 TIGD1Q96MW7 591 aa27.25■■□□□ 1.95
SORL1-210ENST00000532451 UBAC1Q9BSL1 405 aa27.25■■□□□ 1.95
SORL1-210ENST00000532451 NARFQ9UHQ1 456 aa27.25■■□□□ 1.95
SORL1-210ENST00000532451 TOM1O60784 492 aa27.25■■□□□ 1.95
SORL1-210ENST00000532451 NBPF11Q86T75 865 aa27.25■■□□□ 1.95
SORL1-210ENST00000532451 ZNF654Q8IZM8 581 aa27.25■■□□□ 1.95
SORL1-210ENST00000532451 ESR2Q92731 530 aa27.25■■□□□ 1.95
SORL1-210ENST00000532451 FBXW7Q969H0 707 aa27.25■■□□□ 1.95
SORL1-210ENST00000532451 HPSEQ9Y251 543 aa27.25■■□□□ 1.95
SORL1-210ENST00000532451 MMP1P03956 469 aa27.24■■□□□ 1.95
SORL1-210ENST00000532451 BPIFA3Q9BQP9 254 aa27.24■■□□□ 1.95
SORL1-210ENST00000532451 RBM6P78332 1123 aaKnown RBP27.24■■□□□ 1.95
SORL1-210ENST00000532451 SHC4Q6S5L8 630 aa27.24■■□□□ 1.95
SORL1-210ENST00000532451 PTF1AQ7RTS3 328 aa27.24■■□□□ 1.95
SORL1-210ENST00000532451 FBXO33Q7Z6M2 555 aa27.24■■□□□ 1.95
SORL1-210ENST00000532451 PRIMPOLQ96LW4 560 aa27.24■■□□□ 1.95
SORL1-210ENST00000532451 SEMA3EO15041 775 aa27.23■■□□□ 1.95
SORL1-210ENST00000532451 RPS6KA4O75676 772 aa27.23■■□□□ 1.95
SORL1-210ENST00000532451 SYKP43405 635 aa27.23■■□□□ 1.95
SORL1-210ENST00000532451 DYNLL1P63167 89 aaKnown RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms