RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 A0A1B0GUL6 1792 aa13.42□□□□□ -0.26
CAPN1-221ENST00000531068 FKTNO75072 461 aa13.41□□□□□ -0.26
CAPN1-221ENST00000531068 CETPP11597 493 aa13.41□□□□□ -0.26
CAPN1-221ENST00000531068 PLCG2P16885 1265 aa13.41□□□□□ -0.26
CAPN1-221ENST00000531068 PPATQ06203 517 aa13.41□□□□□ -0.26
CAPN1-221ENST00000531068 SNAPC2Q13487 334 aa13.41□□□□□ -0.26
CAPN1-221ENST00000531068 AAMPQ13685 434 aa13.41□□□□□ -0.26
CAPN1-221ENST00000531068 PKN2Q16513 984 aaKnown RBP13.41□□□□□ -0.26
CAPN1-221ENST00000531068 TMED8Q6PL24 325 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-221ENST00000531068 AACSQ86V21 672 aa13.41□□□□□ -0.26
CAPN1-221ENST00000531068 ZNF296Q8WUU4 475 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-221ENST00000531068 ZKSCAN4Q969J2 545 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-221ENST00000531068 OTUD5Q96G74 571 aa13.41□□□□□ -0.26
CAPN1-221ENST00000531068 MS4A4AQ96JQ5 239 aa13.41□□□□□ -0.26
CAPN1-221ENST00000531068 SNCAIPQ9Y6H5 919 aa13.41□□□□□ -0.26
CAPN1-221ENST00000531068 CCL15-CCL14A0A0B4J2E2 113 aa13.4□□□□□ -0.26
CAPN1-221ENST00000531068 IGF2BP3O00425 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
CAPN1-221ENST00000531068 CYP2E1P05181 493 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-221ENST00000531068 ZAP70P43403 619 aa13.4□□□□□ -0.26
CAPN1-221ENST00000531068 RHBDL3P58872 404 aa13.4□□□□□ -0.26
CAPN1-221ENST00000531068 PICALMQ13492 652 aa13.4□□□□□ -0.26
CAPN1-221ENST00000531068 CCL15Q16663 113 aa13.4□□□□□ -0.26
CAPN1-221ENST00000531068 ZFPM1Q8IX07 1006 aa13.4□□□□□ -0.26
CAPN1-221ENST00000531068 ZNF384Q8TF68 577 aa13.4□□□□□ -0.26
CAPN1-221ENST00000531068 IFIT2P09913 472 aaKnown RBP13.39□□□□□ -0.27
CAPN1-221ENST00000531068 INPP5BP32019 993 aa13.39□□□□□ -0.27
CAPN1-221ENST00000531068 PPP4CP60510 307 aa13.39□□□□□ -0.27
CAPN1-221ENST00000531068 MAP3K10Q02779 954 aa13.39□□□□□ -0.27
CAPN1-221ENST00000531068 PPIL2Q13356 520 aa13.39□□□□□ -0.27
CAPN1-221ENST00000531068 NOL9Q5SY16 702 aaKnown RBP13.39□□□□□ -0.27
CAPN1-221ENST00000531068 CERS3Q8IU89 383 aa13.39□□□□□ -0.27
CAPN1-221ENST00000531068 SIRT2Q8IXJ6 389 aa13.39□□□□□ -0.27
CAPN1-221ENST00000531068 CNKSR2Q8WXI2 1034 aa13.39□□□□□ -0.27
CAPN1-221ENST00000531068 PTPN18Q99952 460 aa13.39□□□□□ -0.27
CAPN1-221ENST00000531068 IL1RAPL2Q9NP60 686 aa13.39□□□□□ -0.27
CAPN1-221ENST00000531068 TLR7Q9NYK1 1049 aaKnown RBP13.39□□□□□ -0.27
CAPN1-221ENST00000531068 CCDC85CA6NKD9 419 aa13.38□□□□□ -0.27
CAPN1-221ENST00000531068 IRF6O14896 467 aa13.38□□□□□ -0.27
CAPN1-221ENST00000531068 TBC1D12O60347 775 aa13.38□□□□□ -0.27
CAPN1-221ENST00000531068 MAP3K12Q12852 859 aa13.38□□□□□ -0.27
CAPN1-221ENST00000531068 TEX11Q8IYF3 940 aa13.38□□□□□ -0.27
CAPN1-221ENST00000531068 BRI3BPQ8WY22 251 aa13.38□□□□□ -0.27
CAPN1-221ENST00000531068 ZFYVE28Q9HCC9 887 aa13.38□□□□□ -0.27
CAPN1-221ENST00000531068 ZCCHC17Q9NP64 241 aaKnown RBP13.38□□□□□ -0.27
CAPN1-221ENST00000531068 DDX4Q9NQI0 724 aaKnown RBP13.38□□□□□ -0.27
CAPN1-221ENST00000531068 PICK1Q9NRD5 415 aa13.38□□□□□ -0.27
CAPN1-221ENST00000531068 DDTLA6NHG4 134 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-221ENST00000531068 APBB1O00213 710 aa13.37□□□□□ -0.27
CAPN1-221ENST00000531068 CTNND1O60716 968 aaKnown RBP13.37□□□□□ -0.27
CAPN1-221ENST00000531068 IDH1O75874 414 aaKnown RBP13.37□□□□□ -0.27
CAPN1-221ENST00000531068 ARHGEF6Q15052 776 aa13.37□□□□□ -0.27
CAPN1-221ENST00000531068 TTF1Q15361 905 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-221ENST00000531068 SH3BP5LQ7L8J4 393 aa13.37□□□□□ -0.27
CAPN1-221ENST00000531068 DHX36Q9H2U1 1008 aaKnown RBP13.37□□□□□ -0.27
CAPN1-221ENST00000531068 R3HDMLQ9H3Y0 253 aa13.37□□□□□ -0.27
CAPN1-221ENST00000531068 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.37□□□□□ -0.27
CAPN1-221ENST00000531068 PIH1D3Q9NQM4 214 aaKnown RBP13.37□□□□□ -0.27
CAPN1-221ENST00000531068 PHF20L1A8MW92 1017 aa13.36□□□□□ -0.27
CAPN1-221ENST00000531068 CXCL11O14625 94 aa13.36□□□□□ -0.27
CAPN1-221ENST00000531068 CYP7A1P22680 504 aa13.36□□□□□ -0.27
CAPN1-221ENST00000531068 CRHR2Q13324 411 aa13.36□□□□□ -0.27
CAPN1-221ENST00000531068 TAF1CQ15572 869 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-221ENST00000531068 B4GALNT3Q6L9W6 998 aa13.36□□□□□ -0.27
CAPN1-221ENST00000531068 SCYL3Q8IZE3 742 aa13.36□□□□□ -0.27
CAPN1-221ENST00000531068 SH3RF3Q8TEJ3 882 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-221ENST00000531068 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.36□□□□□ -0.27
CAPN1-221ENST00000531068 ERO1AQ96HE7 468 aa13.36□□□□□ -0.27
CAPN1-221ENST00000531068 OSBPL5Q9H0X9 879 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-221ENST00000531068 AATFQ9NY61 560 aaKnown RBP eCLIP13.36□□□□□ -0.276e-6■■■■■ 54.7
CAPN1-221ENST00000531068 PCDHB15Q9Y5E8 787 aa13.36□□□□□ -0.27
CAPN1-221ENST00000531068 SP3Q02447 781 aa13.35□□□□□ -0.27
CAPN1-221ENST00000531068 FOXP4Q8IVH2 680 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-221ENST00000531068 PI4KBQ9UBF8 816 aa13.35□□□□□ -0.27
CAPN1-221ENST00000531068 KCNH4Q9UQ05 1017 aa13.35□□□□□ -0.27
CAPN1-221ENST00000531068 ZHX2Q9Y6X8 837 aa13.35□□□□□ -0.27
CAPN1-221ENST00000531068 RFX7Q2KHR2 1363 aa13.34□□□□□ -0.27
CAPN1-221ENST00000531068 ATRNL1Q5VV63 1379 aa13.34□□□□□ -0.27
CAPN1-221ENST00000531068 BTBD19C9JJ37 291 aa13.34□□□□□ -0.27
CAPN1-221ENST00000531068 PTPRAP18433 802 aa13.34□□□□□ -0.27
CAPN1-221ENST00000531068 FBXO46Q6PJ61 603 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-221ENST00000531068 FASTKD5Q7L8L6 764 aaKnown RBP13.34□□□□□ -0.27
CAPN1-221ENST00000531068 ANKRD23Q86SG2 305 aa13.34□□□□□ -0.27
CAPN1-221ENST00000531068 FAM43AQ8N2R8 423 aa13.34□□□□□ -0.27
CAPN1-221ENST00000531068 MAGEB6Q8N7X4 407 aa13.34□□□□□ -0.27
CAPN1-221ENST00000531068 TGFBRAP1Q8WUH2 860 aa13.34□□□□□ -0.27
CAPN1-221ENST00000531068 LRRCC1Q9C099 1032 aa13.34□□□□□ -0.27
CAPN1-221ENST00000531068 HERC5Q9UII4 1024 aaKnown RBP13.34□□□□□ -0.27
CAPN1-221ENST00000531068 TLR2O60603 784 aa13.33□□□□□ -0.28
CAPN1-221ENST00000531068 ADGRA1Q86SQ6 560 aa13.33□□□□□ -0.28
CAPN1-221ENST00000531068 TRIM34Q9BYJ4 488 aa13.33□□□□□ -0.28
CAPN1-221ENST00000531068 TBC1D2Q9BYX2 928 aa13.33□□□□□ -0.28
CAPN1-221ENST00000531068 BCL11AQ9H165 835 aa13.33□□□□□ -0.28
CAPN1-221ENST00000531068 ANTXR1Q9H6X2 564 aa13.33□□□□□ -0.28
CAPN1-221ENST00000531068 ARAP2Q8WZ64 1704 aa13.33□□□□□ -0.28
CAPN1-221ENST00000531068 HLA-DOAP06340 250 aa13.32□□□□□ -0.28
CAPN1-221ENST00000531068 ATP5JP18859 108 aa13.32□□□□□ -0.28
CAPN1-221ENST00000531068 MAPKAPK5Q8IW41 473 aa13.32□□□□□ -0.28
CAPN1-221ENST00000531068 DCTPP1Q9H773 170 aa13.32□□□□□ -0.28
CAPN1-221ENST00000531068 EFCC1Q9HA90 598 aa13.32□□□□□ -0.28
CAPN1-221ENST00000531068 HPS5Q9UPZ3 1129 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms