RNA–Protein interactions for RNA: ENST00000530786.5

BDNF-214, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-214ENST00000530786 CCT2P78371 535 aaKnown RBP8.66□□□□□ -1.02
BDNF-214ENST00000530786 CTDSPL2Q05D32 466 aa8.66□□□□□ -1.02
BDNF-214ENST00000530786 FOXD4L6Q3SYB3 417 aaPredicted RBP8.66□□□□□ -1.02
BDNF-214ENST00000530786 SLFNL1Q499Z3 407 aa8.66□□□□□ -1.02
BDNF-214ENST00000530786 FOXD4L3Q6VB84 417 aaPredicted RBP8.66□□□□□ -1.02
BDNF-214ENST00000530786 DHX37Q8IY37 1157 aaKnown RBP8.66□□□□□ -1.02
BDNF-214ENST00000530786 INTS4Q96HW7 963 aaKnown RBP8.66□□□□□ -1.02
BDNF-214ENST00000530786 TJP1Q07157 1748 aa8.66□□□□□ -1.02
BDNF-214ENST00000530786 TXNRD3Q86VQ6 643 aa8.66□□□□□ -1.02
BDNF-214ENST00000530786 ANP32BQ92688 251 aaKnown RBP8.66□□□□□ -1.02
BDNF-214ENST00000530786 ANGEL1Q9UNK9 670 aaKnown RBP8.66□□□□□ -1.02
BDNF-214ENST00000530786 FOSBP53539 338 aa8.66□□□□□ -1.02
BDNF-214ENST00000530786 ALX1Q15699 326 aa8.66□□□□□ -1.02
BDNF-214ENST00000530786 DPY19L2Q6NUT2 758 aa8.66□□□□□ -1.02
BDNF-214ENST00000530786 DDX11Q96FC9 970 aa8.66□□□□□ -1.02
BDNF-214ENST00000530786 KLRG2A4D1S0 409 aaPredicted RBP8.65□□□□□ -1.02
BDNF-214ENST00000530786 PRKAB2O43741 272 aa8.65□□□□□ -1.02
BDNF-214ENST00000530786 CALM1P0DP23 149 aa8.65□□□□□ -1.02
BDNF-214ENST00000530786 CALM2P0DP24 149 aa8.65□□□□□ -1.02
BDNF-214ENST00000530786 CALM3P0DP25 149 aa8.65□□□□□ -1.02
BDNF-214ENST00000530786 IARSP41252 1262 aaKnown RBP8.65□□□□□ -1.02
BDNF-214ENST00000530786 KIAA2012Q0VF49 1180 aa8.65□□□□□ -1.02
BDNF-214ENST00000530786 ZNRF3Q9ULT6 936 aa8.65□□□□□ -1.02
BDNF-214ENST00000530786 MROH7-TTC4A0A0A0MT08 1334 aa8.65□□□□□ -1.02
BDNF-214ENST00000530786 IL1R1P14778 569 aa8.65□□□□□ -1.02
BDNF-214ENST00000530786 NT5C2P49902 561 aa8.65□□□□□ -1.02
BDNF-214ENST00000530786 TNFAIP1Q13829 316 aa8.65□□□□□ -1.02
BDNF-214ENST00000530786 SYAP1Q96A49 352 aaPredicted RBP8.65□□□□□ -1.02
BDNF-214ENST00000530786 NUP98P52948 1817 aa8.65□□□□□ -1.02
BDNF-214ENST00000530786 APOBRQ0VD83 1088 aa8.65□□□□□ -1.02
BDNF-214ENST00000530786 NECAB1Q8N987 351 aa8.65□□□□□ -1.02
BDNF-214ENST00000530786 PRDM1O75626 825 aa8.65□□□□□ -1.03
BDNF-214ENST00000530786 GNAQP50148 359 aa8.65□□□□□ -1.03
BDNF-214ENST00000530786 ADCK5Q3MIX3 580 aa8.65□□□□□ -1.03
BDNF-214ENST00000530786 VPS33BQ9H267 617 aa8.65□□□□□ -1.03
BDNF-214ENST00000530786 MYH14Q7Z406 1995 aaKnown RBP8.65□□□□□ -1.03
BDNF-214ENST00000530786 USP17L8P0C7I0 530 aa8.64□□□□□ -1.03
BDNF-214ENST00000530786 GJB2P29033 226 aa8.64□□□□□ -1.03
BDNF-214ENST00000530786 CRKP46108 304 aa8.64□□□□□ -1.03
BDNF-214ENST00000530786 SSRP1Q08945 709 aaKnown RBP8.64□□□□□ -1.03
BDNF-214ENST00000530786 TCP10Q12799 353 aa8.64□□□□□ -1.03
BDNF-214ENST00000530786 SKOR2Q2VWA4 1001 aaPredicted RBP8.64□□□□□ -1.03
BDNF-214ENST00000530786 OLFM4Q6UX06 510 aa8.64□□□□□ -1.03
BDNF-214ENST00000530786 SALL1Q9NSC2 1324 aa8.64□□□□□ -1.03
BDNF-214ENST00000530786 RTN1Q16799 776 aa8.64□□□□□ -1.03
BDNF-214ENST00000530786 HOOK2Q96ED9 719 aa8.64□□□□□ -1.03
BDNF-214ENST00000530786 DHX36Q9H2U1 1008 aaKnown RBP8.64□□□□□ -1.03
BDNF-214ENST00000530786 ORC3Q9UBD5 711 aaPredicted RBP8.64□□□□□ -1.03
BDNF-214ENST00000530786 TSGA10IPQ3SY00 556 aa8.63□□□□□ -1.03
BDNF-214ENST00000530786 CCDC34Q96HJ3 373 aa8.63□□□□□ -1.03
BDNF-214ENST00000530786 C8orf76Q96K31 380 aa8.63□□□□□ -1.03
BDNF-214ENST00000530786 PSMD1Q99460 953 aa8.63□□□□□ -1.03
BDNF-214ENST00000530786 ZKSCAN3Q9BRR0 538 aa8.63□□□□□ -1.03
BDNF-214ENST00000530786 FAM205AQ6ZU69 1335 aa8.63□□□□□ -1.03
BDNF-214ENST00000530786 GSG1L2A8MUP6 293 aa8.63□□□□□ -1.03
BDNF-214ENST00000530786 CHGBP05060 677 aa8.63□□□□□ -1.03
BDNF-214ENST00000530786 TFAP4Q01664 338 aa8.63□□□□□ -1.03
BDNF-214ENST00000530786 PPP2R5BQ15173 497 aa8.63□□□□□ -1.03
BDNF-214ENST00000530786 SAMD1Q6SPF0 538 aaPredicted RBP8.63□□□□□ -1.03
BDNF-214ENST00000530786 CCDC144CPQ8IYA2 1237 aa8.63□□□□□ -1.03
BDNF-214ENST00000530786 CCDC82Q8N4S0 544 aa8.63□□□□□ -1.03
BDNF-214ENST00000530786 ZNF396Q96N95 335 aaPredicted RBP8.63□□□□□ -1.03
BDNF-214ENST00000530786 CCDC96Q2M329 555 aa8.63□□□□□ -1.03
BDNF-214ENST00000530786 HHIPL2Q6UWX4 724 aa8.63□□□□□ -1.03
BDNF-214ENST00000530786 SH3RF3Q8TEJ3 882 aaPredicted RBP8.63□□□□□ -1.03
BDNF-214ENST00000530786 DCP1AQ9NPI6 582 aaPredicted RBP8.63□□□□□ -1.03
BDNF-214ENST00000530786 SEC63Q9UGP8 760 aaKnown RBP8.63□□□□□ -1.03
BDNF-214ENST00000530786 DDX49Q9Y6V7 483 aaKnown RBP8.63□□□□□ -1.03
BDNF-214ENST00000530786 CFAP100Q494V2 611 aa8.62□□□□□ -1.03
BDNF-214ENST00000530786 RAB11FIP4Q86YS3 637 aa8.62□□□□□ -1.03
BDNF-214ENST00000530786 ZNF274Q96GC6 653 aaPredicted RBP8.62□□□□□ -1.03
BDNF-214ENST00000530786 STX6O43752 255 aa8.62□□□□□ -1.03
BDNF-214ENST00000530786 MARCH6O60337 910 aa8.62□□□□□ -1.03
BDNF-214ENST00000530786 HDLBPQ00341 1268 aaKnown RBP8.62□□□□□ -1.03
BDNF-214ENST00000530786 LLPHQ9BRT6 129 aaKnown RBP8.62□□□□□ -1.03
BDNF-214ENST00000530786 PDGFDQ9GZP0 370 aaPredicted RBP8.62□□□□□ -1.03
BDNF-214ENST00000530786 IL25Q9H293 177 aa8.62□□□□□ -1.03
BDNF-214ENST00000530786 RBM27Q9P2N5 1060 aaKnown RBP8.62□□□□□ -1.03
BDNF-214ENST00000530786 WTIPA6NIX2 430 aaPredicted RBP8.62□□□□□ -1.03
BDNF-214ENST00000530786 NF2P35240 595 aa8.62□□□□□ -1.03
BDNF-214ENST00000530786 FEZ1Q99689 392 aa8.62□□□□□ -1.03
BDNF-214ENST00000530786 RBM28Q9NW13 759 aaKnown RBP8.62□□□□□ -1.03
BDNF-214ENST00000530786 SWAP70Q9UH65 585 aa8.62□□□□□ -1.03
BDNF-214ENST00000530786 BRD2P25440 801 aaKnown RBP8.62□□□□□ -1.03
BDNF-214ENST00000530786 PPP4CP60510 307 aa8.62□□□□□ -1.03
BDNF-214ENST00000530786 KRT85P78386 507 aa8.62□□□□□ -1.03
BDNF-214ENST00000530786 RSBN1LQ6PCB5 846 aaPredicted RBP8.62□□□□□ -1.03
BDNF-214ENST00000530786 SLC26A6Q9BXS9 759 aa8.62□□□□□ -1.03
BDNF-214ENST00000530786 SERPINB13Q9UIV8 391 aa8.62□□□□□ -1.03
BDNF-214ENST00000530786 DAGLAQ9Y4D2 1042 aa8.62□□□□□ -1.03
BDNF-214ENST00000530786 TCP10L2B9ZVM9 353 aa8.61□□□□□ -1.03
BDNF-214ENST00000530786 NFKBIBQ15653 356 aa8.61□□□□□ -1.03
BDNF-214ENST00000530786 STAG1Q8WVM7 1258 aa8.61□□□□□ -1.03
BDNF-214ENST00000530786 CCDC17Q96LX7 622 aa8.61□□□□□ -1.03
BDNF-214ENST00000530786 ZSCAN10Q96SZ4 725 aaPredicted RBP8.61□□□□□ -1.03
BDNF-214ENST00000530786 GPR75-ASB3A0A0A6YYF3 556 aa8.61□□□□□ -1.03
BDNF-214ENST00000530786 TTLL12Q14166 644 aaPredicted RBP8.61□□□□□ -1.03
BDNF-214ENST00000530786 PI4KBQ9UBF8 816 aa8.61□□□□□ -1.03
BDNF-214ENST00000530786 CFAP45Q9UL16 551 aa8.61□□□□□ -1.03
BDNF-214ENST00000530786 FAM47AQ5JRC9 791 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms