RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 BAG1Q99933 345 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-227ENST00000530748 LZTS2Q9BRK4 669 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 CCDC87Q9NVE4 849 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 BLMP54132 1417 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-227ENST00000530748 USP19O94966 1318 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 CUTAO60888 179 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 VAV2P52735 878 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 SYNRGQ9UMZ2 1314 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 WDR66Q8TBY9 1149 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 FAM89AQ96GI7 184 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 FNBP1Q96RU3 617 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 A0A1B0GVL5 298 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 ATP2C2O75185 946 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 CLCN1P35523 988 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 ADCY7P51828 1080 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 STRN3Q13033 797 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 KIAA1524Q8TCG1 905 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 CLSTN2Q9H4D0 955 aa9.51□□□□□ -0.89
CTNND1-227ENST00000530748 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.51□□□□□ -0.89
CTNND1-227ENST00000530748 DKC1O60832 514 aaKnown RBP eCLIP9.5□□□□□ -0.89
CTNND1-227ENST00000530748 GAS8O95995 478 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 PLCD3Q8N3E9 789 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 RAB3IL1Q8TBN0 382 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 LPIN2Q92539 896 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 PKD2L1Q9P0L9 805 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 SYT10Q6XYQ8 523 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 NBPF11Q86T75 865 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 SPATA5Q8NB90 893 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 HOOK2Q96ED9 719 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 SUCLG2Q96I99 432 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 IFT74Q96LB3 600 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 NAP1L3Q99457 506 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-227ENST00000530748 SH3TC1Q8TE82 1336 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 MYO5CQ9NQX4 1742 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 CHMP2AO43633 222 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 PLCB3Q01970 1234 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 CDAN1Q8IWY9 1227 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 CCDC26Q8TAB7 109 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 FBF1Q8TES7 1133 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 GJA3Q9Y6H8 435 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 TNFAIP3P21580 790 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 ATP5DP30049 168 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 ARL1P40616 181 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-227ENST00000530748 TUBB2AQ13885 445 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 IFT81Q8WYA0 676 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 TUBB2BQ9BVA1 445 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 NDC80O14777 642 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 GPAA1O43292 621 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 NLRP12P59046 1061 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 GCKRQ14397 625 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 TTC38Q5R3I4 469 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 LIN9Q5TKA1 542 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 CCDC121Q6ZUS5 278 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 KRT25Q7Z3Z0 450 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 ANGEL1Q9UNK9 670 aaKnown RBP9.5□□□□□ -0.89
CTNND1-227ENST00000530748 INSRP06213 1382 aa9.5□□□□□ -0.89
CTNND1-227ENST00000530748 TRAF5O00463 557 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 MCM6Q14566 821 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 NUP58Q9BVL2 599 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 AATFQ9NY61 560 aaKnown RBP eCLIP9.49□□□□□ -0.89
CTNND1-227ENST00000530748 AGTPBP1Q9UPW5 1226 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 SP4Q02446 784 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 PAK1Q13153 545 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 CCDC122Q5T0U0 273 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 NCAPH2Q6IBW4 605 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 CSRNP2Q9H175 543 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 KCNH3Q9ULD8 1083 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 FAM169AQ9Y6X4 670 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 KDRP35968 1356 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 PPP2R5BQ15173 497 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 ZNF594Q96JF6 807 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-227ENST00000530748 SMC6Q96SB8 1091 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 TTF2Q9UNY4 1162 aaKnown RBP9.49□□□□□ -0.89
CTNND1-227ENST00000530748 ZBED4O75132 1171 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 ALDH3A1P30838 453 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 CCDC6Q16204 474 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 HDXQ7Z353 690 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 UBLCP1Q8WVY7 318 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-227ENST00000530748 DBNDD2Q9BQY9 259 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 TXNDC16Q9P2K2 825 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 ARHGEF5Q12774 1597 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 IBTKQ9P2D0 1353 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-227ENST00000530748 CCDC169A6NNP5 214 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 TUBBP07437 444 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 PPP2R3AQ06190 1150 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.49□□□□□ -0.89
CTNND1-227ENST00000530748 DISP1Q96F81 1524 aa9.49□□□□□ -0.89
CTNND1-227ENST00000530748 RHOXF2BP0C7M4 288 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 CALCOCO2Q13137 446 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 BIRC3Q13489 604 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 TAF12Q16514 161 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 IGSF22Q8N9C0 903 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 TTC16Q8NEE8 873 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 RHOXF2Q9BQY4 288 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 DDX23Q9BUQ8 820 aaKnown RBP9.48□□□□□ -0.89
CTNND1-227ENST00000530748 VPS18Q9P253 973 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 RSPH14Q9UHP6 348 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 CPA1P15085 419 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 DPP8Q6V1X1 898 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms