RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 GPR153Q6NV75 609 aa13.45□□□□□ -0.26
TM9SF1-210ENST00000530563 WDR63Q8IWG1 891 aa13.45□□□□□ -0.26
TM9SF1-210ENST00000530563 PAWRQ96IZ0 340 aaKnown RBP13.45□□□□□ -0.26
TM9SF1-210ENST00000530563 TFRCP02786 760 aaKnown RBP13.44□□□□□ -0.26
TM9SF1-210ENST00000530563 PTPRAP18433 802 aa13.44□□□□□ -0.26
TM9SF1-210ENST00000530563 KLHDC4Q8TBB5 520 aa13.44□□□□□ -0.26
TM9SF1-210ENST00000530563 DIS3LQ8TF46 1054 aaKnown RBP13.44□□□□□ -0.26
TM9SF1-210ENST00000530563 SLC45A1Q9Y2W3 748 aa13.44□□□□□ -0.26
TM9SF1-210ENST00000530563 AFG3L2Q9Y4W6 797 aa13.44□□□□□ -0.26
TM9SF1-210ENST00000530563 SLURP2P0DP57 97 aa13.43□□□□□ -0.26
TM9SF1-210ENST00000530563 SLC4A10Q6U841 1118 aa13.43□□□□□ -0.26
TM9SF1-210ENST00000530563 SH3BP5LQ7L8J4 393 aa13.43□□□□□ -0.26
TM9SF1-210ENST00000530563 FASTKD5Q7L8L6 764 aaKnown RBP13.43□□□□□ -0.26
TM9SF1-210ENST00000530563 WDR66Q8TBY9 1149 aa13.43□□□□□ -0.26
TM9SF1-210ENST00000530563 ZHX2Q9Y6X8 837 aa13.43□□□□□ -0.26
TM9SF1-210ENST00000530563 PRDX5P30044 214 aa13.42□□□□□ -0.26
TM9SF1-210ENST00000530563 PUM3Q15397 648 aaKnown RBP13.42□□□□□ -0.26
TM9SF1-210ENST00000530563 SCYL3Q8IZE3 742 aa13.42□□□□□ -0.26
TM9SF1-210ENST00000530563 DOCK3Q8IZD9 2030 aa13.41□□□□□ -0.26
TM9SF1-210ENST00000530563 RFX5P48382 616 aaPredicted RBP13.41□□□□□ -0.26
TM9SF1-210ENST00000530563 LRIT3Q3SXY7 679 aa13.41□□□□□ -0.26
TM9SF1-210ENST00000530563 Q7L0L9 218 aa13.41□□□□□ -0.26
TM9SF1-210ENST00000530563 NECAB2Q7Z6G3 386 aa13.41□□□□□ -0.26
TM9SF1-210ENST00000530563 DEFB123Q8N688 67 aa13.41□□□□□ -0.26
TM9SF1-210ENST00000530563 IDI2Q9BXS1 227 aa13.41□□□□□ -0.26
TM9SF1-210ENST00000530563 USP40Q9NVE5 1235 aa13.41□□□□□ -0.26
TM9SF1-210ENST00000530563 MTMR10Q9NXD2 777 aa13.41□□□□□ -0.26
TM9SF1-210ENST00000530563 RFX7Q2KHR2 1363 aa13.41□□□□□ -0.26
TM9SF1-210ENST00000530563 TNPO2O14787 897 aaKnown RBP13.4□□□□□ -0.26
TM9SF1-210ENST00000530563 IFIT1P09914 478 aaKnown RBP13.4□□□□□ -0.26
TM9SF1-210ENST00000530563 RGS3P49796 1198 aa13.4□□□□□ -0.26
TM9SF1-210ENST00000530563 ATG9AQ7Z3C6 839 aa13.4□□□□□ -0.26
TM9SF1-210ENST00000530563 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.4□□□□□ -0.26
TM9SF1-210ENST00000530563 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.4□□□□□ -0.26
TM9SF1-210ENST00000530563 GJD2Q9UKL4 321 aa13.4□□□□□ -0.26
TM9SF1-210ENST00000530563 STXBP5LQ9Y2K9 1186 aa13.4□□□□□ -0.26
TM9SF1-210ENST00000530563 MUC3AQ02505 3323 aa13.4□□□□□ -0.26
TM9SF1-210ENST00000530563 PHIPQ8WWQ0 1821 aa13.39□□□□□ -0.27
TM9SF1-210ENST00000530563 PTPRFP10586 1907 aa13.39□□□□□ -0.27
TM9SF1-210ENST00000530563 ENTPD3O75355 529 aa13.39□□□□□ -0.27
TM9SF1-210ENST00000530563 TREML2Q5T2D2 321 aa13.39□□□□□ -0.27
TM9SF1-210ENST00000530563 GADL1Q6ZQY3 521 aa13.39□□□□□ -0.27
TM9SF1-210ENST00000530563 C7orf61Q8IZ16 206 aa13.39□□□□□ -0.27
TM9SF1-210ENST00000530563 ANKLE1Q8NAG6 615 aa13.39□□□□□ -0.27
TM9SF1-210ENST00000530563 LPIN2Q92539 896 aa13.39□□□□□ -0.27
TM9SF1-210ENST00000530563 USP44Q9H0E7 712 aa13.39□□□□□ -0.27
TM9SF1-210ENST00000530563 ZMYND8Q9ULU4 1186 aaPredicted RBP13.39□□□□□ -0.27
TM9SF1-210ENST00000530563 SALL2Q9Y467 1007 aaPredicted RBP13.39□□□□□ -0.27
TM9SF1-210ENST00000530563 CDH23Q9H251 3354 aa13.39□□□□□ -0.27
TM9SF1-210ENST00000530563 SALL1Q9NSC2 1324 aa13.39□□□□□ -0.27
TM9SF1-210ENST00000530563 DDTLA6NHG4 134 aaPredicted RBP13.38□□□□□ -0.27
TM9SF1-210ENST00000530563 EYA2O00167 538 aa13.38□□□□□ -0.27
TM9SF1-210ENST00000530563 ZBTB22O15209 634 aa13.38□□□□□ -0.27
TM9SF1-210ENST00000530563 MAGEA10P43363 369 aaPredicted RBP13.38□□□□□ -0.27
TM9SF1-210ENST00000530563 TRIM32Q13049 653 aa13.38□□□□□ -0.27
TM9SF1-210ENST00000530563 CCDC84Q86UT8 332 aaPredicted RBP13.38□□□□□ -0.27
TM9SF1-210ENST00000530563 ANKRD13CQ8N6S4 541 aa13.38□□□□□ -0.27
TM9SF1-210ENST00000530563 DDX4Q9NQI0 724 aaKnown RBP13.38□□□□□ -0.27
TM9SF1-210ENST00000530563 PICK1Q9NRD5 415 aa13.38□□□□□ -0.27
TM9SF1-210ENST00000530563 AGTPBP1Q9UPW5 1226 aa13.38□□□□□ -0.27
TM9SF1-210ENST00000530563 GAKO14976 1311 aa13.38□□□□□ -0.27
TM9SF1-210ENST00000530563 CTNND1O60716 968 aaKnown RBP13.37□□□□□ -0.27
TM9SF1-210ENST00000530563 LDHBP07195 334 aaKnown RBP13.37□□□□□ -0.27
TM9SF1-210ENST00000530563 FAM110CQ1W6H9 321 aa13.37□□□□□ -0.27
TM9SF1-210ENST00000530563 SMCR8Q8TEV9 937 aaPredicted RBP13.37□□□□□ -0.27
TM9SF1-210ENST00000530563 COA7Q96BR5 231 aa13.37□□□□□ -0.27
TM9SF1-210ENST00000530563 COL25A1Q9BXS0 654 aaPredicted RBP13.37□□□□□ -0.27
TM9SF1-210ENST00000530563 AK9Q5TCS8 1911 aa13.37□□□□□ -0.27
TM9SF1-210ENST00000530563 TRIM75PA6NK02 468 aa13.36□□□□□ -0.27
TM9SF1-210ENST00000530563 HMGCRP04035 888 aa13.36□□□□□ -0.27
TM9SF1-210ENST00000530563 SLC5A1P13866 664 aa13.36□□□□□ -0.27
TM9SF1-210ENST00000530563 SYN1P17600 705 aa13.36□□□□□ -0.27
TM9SF1-210ENST00000530563 TDHQ8IZJ6 230 aa13.36□□□□□ -0.27
TM9SF1-210ENST00000530563 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
TM9SF1-210ENST00000530563 NBPF3Q9H094 633 aa13.36□□□□□ -0.27
TM9SF1-210ENST00000530563 OGDHLQ9ULD0 1010 aa13.36□□□□□ -0.27
TM9SF1-210ENST00000530563 RPTORQ8N122 1335 aa13.36□□□□□ -0.27
TM9SF1-210ENST00000530563 DOCK2Q92608 1830 aa13.35□□□□□ -0.27
TM9SF1-210ENST00000530563 MAP3K21Q5TCX8 1036 aa13.35□□□□□ -0.27
TM9SF1-210ENST00000530563 MRPL50Q8N5N7 158 aaKnown RBP13.35□□□□□ -0.27
TM9SF1-210ENST00000530563 TAOK2Q9UL54 1235 aa13.35□□□□□ -0.27
TM9SF1-210ENST00000530563 LRRFIP2Q9Y608 721 aaKnown RBP13.35□□□□□ -0.27
TM9SF1-210ENST00000530563 PFASO15067 1338 aa13.35□□□□□ -0.27
TM9SF1-210ENST00000530563 PLXNB2O15031 1838 aa13.34□□□□□ -0.27
TM9SF1-210ENST00000530563 TBC1D12O60347 775 aa13.34□□□□□ -0.27
TM9SF1-210ENST00000530563 COL6A1P12109 1028 aa13.34□□□□□ -0.27
TM9SF1-210ENST00000530563 ZEB1P37275 1124 aaPredicted RBP13.34□□□□□ -0.27
TM9SF1-210ENST00000530563 PHKA1P46020 1223 aa13.34□□□□□ -0.27
TM9SF1-210ENST00000530563 RRP1BQ14684 758 aaKnown RBP13.34□□□□□ -0.27
TM9SF1-210ENST00000530563 PROCA1Q8NCQ7 364 aaPredicted RBP13.34□□□□□ -0.27
TM9SF1-210ENST00000530563 ZNF384Q8TF68 577 aa13.34□□□□□ -0.27
TM9SF1-210ENST00000530563 C11orf49Q9H6J7 331 aa13.34□□□□□ -0.27
TM9SF1-210ENST00000530563 HMX1Q9NP08 348 aaPredicted RBP13.34□□□□□ -0.27
TM9SF1-210ENST00000530563 MYH13Q9UKX3 1938 aa13.34□□□□□ -0.27
TM9SF1-210ENST00000530563 DOCK1Q14185 1865 aa13.33□□□□□ -0.27
TM9SF1-210ENST00000530563 DDX60LQ5H9U9 1706 aaKnown RBP13.33□□□□□ -0.27
TM9SF1-210ENST00000530563 POTEB2H3BUK9 544 aa13.33□□□□□ -0.28
TM9SF1-210ENST00000530563 SEMA3EO15041 775 aa13.33□□□□□ -0.28
TM9SF1-210ENST00000530563 GCLCP48506 637 aaPredicted RBP13.33□□□□□ -0.28
TM9SF1-210ENST00000530563 RHBDL3P58872 404 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms