RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 RELTQ969Z4 430 aa4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 NDFIP2Q9NV92 336 aa4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 LTBP3Q9NS15 1303 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 SENP3-EIF4A1A0A087X0R7 540 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 GFRA2O00451 464 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 IRS4O14654 1257 aaPredicted RBP4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 BNIP3LO60238 219 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 ALDH1L1O75891 902 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 SMNDC1O75940 238 aaKnown RBP eCLIP4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 SOX5P35711 763 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 PRR20EP86478 221 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 PRR20CP86479 221 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 PRR20DP86480 221 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 PRR20BP86481 221 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 PRR20AP86496 221 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 SCARF1Q14162 830 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 CBX2Q14781 532 aaPredicted RBP4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 NFE2Q16621 373 aaPredicted RBP4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 AKAP4Q5JQC9 854 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 CEP135Q66GS9 1140 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 VHLLQ6RSH7 139 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 ADAMTSL4Q6UY14 1074 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 MPRIPQ6WCQ1 1025 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 UNC5AQ6ZN44 842 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 HFE2Q6ZVN8 426 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 RAB44Q7Z6P3 723 aaPredicted RBP4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 RNF180Q86T96 592 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 PDZD3Q86UT5 571 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 LRRC47Q8N1G4 583 aaKnown RBP4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 ZNF526Q8TF50 670 aaPredicted RBP4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 TMEM40Q8WWA1 233 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 EPN3Q9H201 632 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 CACNA2D2Q9NY47 1150 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 MCM8Q9UJA3 840 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 SOX13Q9UN79 622 aa4.78□□□□□ -1.64
AMBRA1-208ENST00000529558 IQCA1LA6NCM1 817 aa4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 PDE8AO60658 829 aa4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 EIF3JO75822 258 aaKnown RBP4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 HTR3BO95264 441 aa4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 GHRHP01286 108 aa4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 ACRP10323 421 aa4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 EPHB1P54762 984 aa4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 MLLT1Q03111 559 aaPredicted RBP4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 ZYXQ15942 572 aaKnown RBP4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 PCSK7Q16549 785 aa4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 SLC10A6Q3KNW5 377 aa4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 CT47A1Q5JQC4 288 aaPredicted RBP4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 TRIM67Q6ZTA4 783 aa4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 TSR2Q969E8 191 aaKnown RBP4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 KISS1RQ969F8 398 aaPredicted RBP4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 RNF166Q96A37 237 aaPredicted RBP4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 KIF2CQ99661 725 aa4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 PCGF6Q9BYE7 350 aa4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 ADAM19Q9H013 955 aa4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 NUCKS1Q9H1E3 243 aaKnown RBP4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 PHAXQ9H814 394 aaKnown RBP4.77□□□□□ -1.65
AMBRA1-208ENST00000529558 SLC22A31A6NKX4 558 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 GSG1L2A8MUP6 293 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 PLD2O14939 933 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 KIF3BO15066 747 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 SUSD5O60279 629 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 ESRRAP11474 423 aaPredicted RBP4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 NME1P15531 152 aaKnown RBP4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 SELPP16109 830 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 L1CAMP32004 1257 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 CDK8P49336 464 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 NEUROD1Q13562 356 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 MLECQ14165 292 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 TTF1Q15361 905 aaPredicted RBP4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 FNDC3BQ53EP0 1204 aaKnown RBP4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 FOXB2Q5VYV0 432 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 MAP1SQ66K74 1059 aaPredicted RBP4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 KIAA1211LQ6NV74 962 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 RIPOR1Q6ZS17 1223 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 UBR7Q8N806 425 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 DDX54Q8TDD1 881 aaKnown RBP4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 ATG4CQ96DT6 458 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 DHRS4Q9BTZ2 278 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 RUSC1Q9BVN2 902 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 NCOA5Q9HCD5 579 aaKnown RBP4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 GMIPQ9P107 970 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 DNMT3LQ9UJW3 386 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 MAPRE3Q9UPY8 281 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 SNCAIPQ9Y6H5 919 aa4.76□□□□□ -1.65
AMBRA1-208ENST00000529558 H7C1W4 665 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 TNFRSF10CO14798 259 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 TSPAN6O43657 245 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 RAPGEF3O95398 923 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 GSTP1P09211 210 aaKnown RBP4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 CD33P20138 364 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 RHBDL3P58872 404 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 AP3B2Q13367 1082 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 BIRC2Q13490 618 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 FAM50AQ14320 339 aaKnown RBP4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 DBN1Q16643 649 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 FAM182BQ5T319 152 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 CDCP2Q5VXM1 449 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 CCSAPQ6IQ19 270 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms