RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 CHMP4CQ96CF2 233 aa18.35■□□□□ 0.53
TM9SF1-208ENST00000529332 RBM17Q96I25 401 aaKnown RBP18.35■□□□□ 0.53
TM9SF1-208ENST00000529332 KLF18A0A0U1RQI7 1052 aa18.34■□□□□ 0.53
TM9SF1-208ENST00000529332 MMP10P09238 476 aa18.34■□□□□ 0.53
TM9SF1-208ENST00000529332 CCDC102BQ68D86 513 aa18.34■□□□□ 0.53
TM9SF1-208ENST00000529332 RAB11FIP4Q86YS3 637 aa18.34■□□□□ 0.53
TM9SF1-208ENST00000529332 CLIC4Q9Y696 253 aa18.34■□□□□ 0.53
TM9SF1-208ENST00000529332 MYH7P12883 1935 aa18.34■□□□□ 0.53
TM9SF1-208ENST00000529332 ARID4AP29374 1257 aaPredicted RBP18.34■□□□□ 0.53
TM9SF1-208ENST00000529332 DEFB132Q7Z7B7 95 aa18.34■□□□□ 0.53
TM9SF1-208ENST00000529332 LINC00301Q8NCQ3 95 aa18.34■□□□□ 0.53
TM9SF1-208ENST00000529332 MRPS27Q92552 414 aaKnown RBP18.34■□□□□ 0.53
TM9SF1-208ENST00000529332 GOLGA8BA8MQT2 603 aa18.33■□□□□ 0.52
TM9SF1-208ENST00000529332 GPAA1O43292 621 aa18.33■□□□□ 0.52
TM9SF1-208ENST00000529332 CHAF1AQ13111 956 aaPredicted RBP18.33■□□□□ 0.52
TM9SF1-208ENST00000529332 ADALQ6DHV7 355 aa18.33■□□□□ 0.52
TM9SF1-208ENST00000529332 C8orf76Q96K31 380 aa18.33■□□□□ 0.52
TM9SF1-208ENST00000529332 BRIP1Q9BX63 1249 aa18.33■□□□□ 0.52
TM9SF1-208ENST00000529332 GJB4Q9NTQ9 266 aa18.33■□□□□ 0.52
TM9SF1-208ENST00000529332 A0A1B0GVL5 298 aa18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 POLR3DP05423 398 aaPredicted RBP18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 MCAMP43121 646 aa18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 FBXO18Q8NFZ0 1043 aa18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 NCOA7Q8NI08 942 aa18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 MRFAP1L1Q96HT8 127 aa18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 ANO10Q9NW15 660 aa18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 ORC3Q9UBD5 711 aaPredicted RBP18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 KLRG2A4D1S0 409 aaPredicted RBP18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 PHKA1P46020 1223 aa18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 NDUFA8P51970 172 aa18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 ARID5BQ14865 1188 aa18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 TTF1Q15361 905 aaPredicted RBP18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 NKX2-3Q8TAU0 364 aa18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 NBPF3Q9H094 633 aa18.32■□□□□ 0.52
TM9SF1-208ENST00000529332 A0A1W2PQ27 194 aa18.31■□□□□ 0.52
TM9SF1-208ENST00000529332 A0A1W2PQ64 194 aa18.31■□□□□ 0.52
TM9SF1-208ENST00000529332 A0A1W2PQD8 194 aa18.31■□□□□ 0.52
TM9SF1-208ENST00000529332 ZNF213O14771 459 aa18.31■□□□□ 0.52
TM9SF1-208ENST00000529332 HOXA10P31260 410 aaPredicted RBP18.31■□□□□ 0.52
TM9SF1-208ENST00000529332 MSL1Q68DK7 614 aa18.31■□□□□ 0.52
TM9SF1-208ENST00000529332 C16orf45Q96MC5 204 aaPredicted RBP18.31■□□□□ 0.52
TM9SF1-208ENST00000529332 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
TM9SF1-208ENST00000529332 BECN2A8MW95 431 aa18.31■□□□□ 0.52
TM9SF1-208ENST00000529332 KIF28PB7ZC32 967 aa18.31■□□□□ 0.52
TM9SF1-208ENST00000529332 PDE6BP35913 854 aa18.31■□□□□ 0.52
TM9SF1-208ENST00000529332 CRAMP1Q96RY5 1269 aa18.31■□□□□ 0.52
TM9SF1-208ENST00000529332 GNL3LQ9NVN8 582 aaKnown RBP18.31■□□□□ 0.52
TM9SF1-208ENST00000529332 NEDD4P46934 1319 aa18.3■□□□□ 0.52
TM9SF1-208ENST00000529332 DHX16O60231 1041 aaKnown RBP18.3■□□□□ 0.52
TM9SF1-208ENST00000529332 STK38Q15208 465 aa18.3■□□□□ 0.52
TM9SF1-208ENST00000529332 CAVIN4Q5BKX8 364 aa18.3■□□□□ 0.52
TM9SF1-208ENST00000529332 MYSM1Q5VVJ2 828 aa18.3■□□□□ 0.52
TM9SF1-208ENST00000529332 RALYLQ86SE5 291 aaKnown RBP18.3■□□□□ 0.52
TM9SF1-208ENST00000529332 LRRC8AQ8IWT6 810 aa18.3■□□□□ 0.52
TM9SF1-208ENST00000529332 FBXW7Q969H0 707 aa18.3■□□□□ 0.52
TM9SF1-208ENST00000529332 POLR3EQ9NVU0 708 aa18.3■□□□□ 0.52
TM9SF1-208ENST00000529332 SNAP23O00161 211 aa18.29■□□□□ 0.52
TM9SF1-208ENST00000529332 CTIFO43310 598 aaKnown RBP18.29■□□□□ 0.52
TM9SF1-208ENST00000529332 TMC4Q7Z404 712 aa18.29■□□□□ 0.52
TM9SF1-208ENST00000529332 AOPEPQ8N6M6 819 aa18.29■□□□□ 0.52
TM9SF1-208ENST00000529332 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.29■□□□□ 0.52
TM9SF1-208ENST00000529332 MYH13Q9UKX3 1938 aa18.29■□□□□ 0.52
TM9SF1-208ENST00000529332 BBOX1O75936 387 aa18.29■□□□□ 0.52
TM9SF1-208ENST00000529332 YEATS4O95619 227 aa18.29■□□□□ 0.52
TM9SF1-208ENST00000529332 ADD2P35612 726 aa18.29■□□□□ 0.52
TM9SF1-208ENST00000529332 CEP57L1Q8IYX8 460 aa18.29■□□□□ 0.52
TM9SF1-208ENST00000529332 KCNG4Q8TDN1 519 aa18.29■□□□□ 0.52
TM9SF1-208ENST00000529332 SDF4Q9BRK5 362 aa18.29■□□□□ 0.52
TM9SF1-208ENST00000529332 CCDC94Q9BW85 323 aaPredicted RBP18.29■□□□□ 0.52
TM9SF1-208ENST00000529332 ZMYND15Q9H091 742 aa18.29■□□□□ 0.52
TM9SF1-208ENST00000529332 WDR19Q8NEZ3 1342 aa18.28■□□□□ 0.52
TM9SF1-208ENST00000529332 CPLX1O14810 134 aa18.28■□□□□ 0.52
TM9SF1-208ENST00000529332 SPTLC2O15270 562 aa18.28■□□□□ 0.52
TM9SF1-208ENST00000529332 SF3A1Q15459 793 aaKnown RBP18.28■□□□□ 0.52
TM9SF1-208ENST00000529332 TBC1D10CQ8IV04 446 aa18.28■□□□□ 0.52
TM9SF1-208ENST00000529332 DOCK2Q92608 1830 aa18.28■□□□□ 0.52
TM9SF1-208ENST00000529332 LRRC37AA6NMS7 1700 aa18.28■□□□□ 0.52
TM9SF1-208ENST00000529332 TNNT1P13805 278 aa18.28■□□□□ 0.52
TM9SF1-208ENST00000529332 KIF23Q02241 960 aaPredicted RBP18.28■□□□□ 0.52
TM9SF1-208ENST00000529332 BRAPQ7Z569 592 aa18.28■□□□□ 0.52
TM9SF1-208ENST00000529332 VPS37DQ86XT2 251 aa18.28■□□□□ 0.52
TM9SF1-208ENST00000529332 SPATA5Q8NB90 893 aa18.28■□□□□ 0.52
TM9SF1-208ENST00000529332 PIH1D3Q9NQM4 214 aaKnown RBP18.28■□□□□ 0.52
TM9SF1-208ENST00000529332 ANKIB1Q9P2G1 1089 aa18.28■□□□□ 0.52
TM9SF1-208ENST00000529332 ZNF804BA4D1E1 1349 aa18.27■□□□□ 0.52
TM9SF1-208ENST00000529332 XDHP47989 1333 aa18.27■□□□□ 0.52
TM9SF1-208ENST00000529332 COL11A2P13942 1736 aaPredicted RBP18.27■□□□□ 0.52
TM9SF1-208ENST00000529332 MYO5AQ9Y4I1 1855 aaKnown RBP18.27■□□□□ 0.52
TM9SF1-208ENST00000529332 NPR1P16066 1061 aa18.27■□□□□ 0.52
TM9SF1-208ENST00000529332 BCAMP50895 628 aa18.27■□□□□ 0.52
TM9SF1-208ENST00000529332 SLC9C2Q5TAH2 1124 aa18.27■□□□□ 0.52
TM9SF1-208ENST00000529332 CYB5R4Q7L1T6 521 aa18.27■□□□□ 0.52
TM9SF1-208ENST00000529332 KIAA1468Q9P260 1216 aa18.27■□□□□ 0.52
TM9SF1-208ENST00000529332 LEMD3Q9Y2U8 911 aa18.27■□□□□ 0.52
TM9SF1-208ENST00000529332 RASGRF1Q13972 1273 aa18.26■□□□□ 0.51
TM9SF1-208ENST00000529332 DPCR1Q3MIW9 517 aa18.26■□□□□ 0.51
TM9SF1-208ENST00000529332 AIFM3Q96NN9 605 aa18.26■□□□□ 0.51
TM9SF1-208ENST00000529332 TPD52L1Q16890 204 aaPredicted RBP18.26■□□□□ 0.51
TM9SF1-208ENST00000529332 AXDND1Q5T1B0 1012 aaPredicted RBP18.26■□□□□ 0.51
TM9SF1-208ENST00000529332 ANKRD7Q92527 254 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms