RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-210ENST00000528439 FLT1P17948 1338 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 ZNF541Q9H0D2 1346 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 USP17L12C9JPN9 530 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 USP17L21D6R901 530 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 WDHD1O75717 1129 aaPredicted RBP11.91□□□□□ -0.5
RPS3-210ENST00000528439 BAG3O95817 575 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 USP17L8P0C7I0 530 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 EXOSC10Q01780 885 aaKnown RBP11.91□□□□□ -0.5
RPS3-210ENST00000528439 ST3GAL1Q11201 340 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 SLC4A8Q2Y0W8 1093 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 HHIPL2Q6UWX4 724 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 MAPKAPK5Q8IW41 473 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 SLF2Q8IX21 1173 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 TEX11Q8IYF3 940 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 SPRYD3Q8NCJ5 442 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 STAG1Q8WVM7 1258 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 TEKT1Q969V4 418 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 TMX3Q96JJ7 454 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 ZDHHC15Q96MV8 337 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 NOL10Q9BSC4 688 aaKnown RBP11.91□□□□□ -0.5
RPS3-210ENST00000528439 DDX4Q9NQI0 724 aaKnown RBP11.91□□□□□ -0.5
RPS3-210ENST00000528439 GPHNQ9NQX3 736 aaPredicted RBP11.91□□□□□ -0.5
RPS3-210ENST00000528439 ATP8A2Q9NTI2 1148 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 ROBO3Q96MS0 1386 aa11.91□□□□□ -0.5
RPS3-210ENST00000528439 SIPA1L1O43166 1804 aa11.9□□□□□ -0.5
RPS3-210ENST00000528439 MYO3BQ8WXR4 1341 aa11.9□□□□□ -0.5
RPS3-210ENST00000528439 MYH1P12882 1939 aa11.9□□□□□ -0.5
RPS3-210ENST00000528439 SHTN1A0MZ66 631 aa11.9□□□□□ -0.5
RPS3-210ENST00000528439 USP5P45974 858 aa11.9□□□□□ -0.5
RPS3-210ENST00000528439 HDLBPQ00341 1268 aaKnown RBP11.9□□□□□ -0.5
RPS3-210ENST00000528439 CDC42EP5Q6NZY7 148 aa11.9□□□□□ -0.5
RPS3-210ENST00000528439 CYB5R4Q7L1T6 521 aa11.9□□□□□ -0.5
RPS3-210ENST00000528439 DHX32Q7L7V1 743 aaKnown RBP11.9□□□□□ -0.5
RPS3-210ENST00000528439 CHST3Q7LGC8 479 aa11.9□□□□□ -0.5
RPS3-210ENST00000528439 STK11IPQ8N1F8 1099 aa11.9□□□□□ -0.5
RPS3-210ENST00000528439 SAP30BPQ9UHR5 308 aaKnown RBP11.9□□□□□ -0.5
RPS3-210ENST00000528439 SERPINA10Q9UK55 444 aa11.9□□□□□ -0.5
RPS3-210ENST00000528439 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.9□□□□□ -0.5
RPS3-210ENST00000528439 MINDY4BA8MYZ0 360 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 B4E1Z4 1266 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 FZD9O00144 591 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 PLCG2P16885 1265 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 CACNB3P54284 484 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 NFIAQ12857 509 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 CFAP100Q494V2 611 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 SBK1Q52WX2 424 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 AKNAD1Q5T1N1 836 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 CIAPIN1Q6FI81 312 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 ARHGAP27Q6ZUM4 889 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 CERS3Q8IU89 383 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 NCOA7Q8NI08 942 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 JDP2Q8WYK2 163 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 AGXT2Q9BYV1 514 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 ALDH8A1Q9H2A2 487 aaPredicted RBP11.89□□□□□ -0.51
RPS3-210ENST00000528439 FOXD4L1Q9NU39 408 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 MCM9Q9NXL9 1143 aa11.89□□□□□ -0.51
RPS3-210ENST00000528439 ARPP21Q9UBL0 812 aaPredicted RBP11.89□□□□□ -0.51
RPS3-210ENST00000528439 PRC1O43663 620 aa11.88□□□□□ -0.51
RPS3-210ENST00000528439 HMGB1P09429 215 aaKnown RBP11.88□□□□□ -0.51
RPS3-210ENST00000528439 FGRP09769 529 aa11.88□□□□□ -0.51
RPS3-210ENST00000528439 DDIT3P35638 169 aa11.88□□□□□ -0.51
RPS3-210ENST00000528439 MCM2P49736 904 aa11.88□□□□□ -0.51
RPS3-210ENST00000528439 CUL4AQ13619 759 aa11.88□□□□□ -0.51
RPS3-210ENST00000528439 ME3Q16798 604 aa11.88□□□□□ -0.51
RPS3-210ENST00000528439 C12orf60Q5U649 245 aa11.88□□□□□ -0.51
RPS3-210ENST00000528439 Q6ZUG5 572 aa11.88□□□□□ -0.51
RPS3-210ENST00000528439 RALYLQ86SE5 291 aaKnown RBP11.88□□□□□ -0.51
RPS3-210ENST00000528439 DYNLL2Q96FJ2 89 aa11.88□□□□□ -0.51
RPS3-210ENST00000528439 MRIQ9BWK5 157 aa11.88□□□□□ -0.51
RPS3-210ENST00000528439 SLKQ9H2G2 1235 aaPredicted RBP11.88□□□□□ -0.51
RPS3-210ENST00000528439 USP40Q9NVE5 1235 aa11.88□□□□□ -0.51
RPS3-210ENST00000528439 TPCN1Q9ULQ1 816 aa11.88□□□□□ -0.51
RPS3-210ENST00000528439 KDM4AO75164 1064 aa11.87□□□□□ -0.51
RPS3-210ENST00000528439 PRDM1O75626 825 aa11.87□□□□□ -0.51
RPS3-210ENST00000528439 PLCD1P51178 756 aa11.87□□□□□ -0.51
RPS3-210ENST00000528439 RBM5P52756 815 aaKnown RBP eCLIP11.87□□□□□ -0.51
RPS3-210ENST00000528439 PICALMQ13492 652 aa11.87□□□□□ -0.51
RPS3-210ENST00000528439 SLC44A5Q8NCS7 719 aa11.87□□□□□ -0.51
RPS3-210ENST00000528439 AGBL3Q8NEM8 1001 aa11.87□□□□□ -0.51
RPS3-210ENST00000528439 BRF1Q92994 677 aa11.87□□□□□ -0.51
RPS3-210ENST00000528439 PRMT6Q96LA8 375 aaPredicted RBP11.87□□□□□ -0.51
RPS3-210ENST00000528439 SENP2Q9HC62 589 aa11.87□□□□□ -0.51
RPS3-210ENST00000528439 DAXXQ9UER7 740 aaPredicted RBP11.87□□□□□ -0.51
RPS3-210ENST00000528439 FAM198AQ9UFP1 575 aa11.87□□□□□ -0.51
RPS3-210ENST00000528439 LIMCH1Q9UPQ0 1083 aa11.87□□□□□ -0.51
RPS3-210ENST00000528439 WDR19Q8NEZ3 1342 aa11.86□□□□□ -0.51
RPS3-210ENST00000528439 SPDYE2BA6NHP3 402 aa11.86□□□□□ -0.51
RPS3-210ENST00000528439 SH2B2O14492 632 aaPredicted RBP11.86□□□□□ -0.51
RPS3-210ENST00000528439 DTNBO60941 627 aa11.86□□□□□ -0.51
RPS3-210ENST00000528439 EGFRP00533 1210 aa11.86□□□□□ -0.51
RPS3-210ENST00000528439 SPDYE6P0CI01 402 aa11.86□□□□□ -0.51
RPS3-210ENST00000528439 LMNB1P20700 586 aa11.86□□□□□ -0.51
RPS3-210ENST00000528439 MCM5P33992 734 aa11.86□□□□□ -0.51
RPS3-210ENST00000528439 GMPSP49915 693 aaPredicted RBP11.86□□□□□ -0.51
RPS3-210ENST00000528439 RRP12Q5JTH9 1297 aaKnown RBP11.86□□□□□ -0.51
RPS3-210ENST00000528439 MFSD6Q6ZSS7 791 aa11.86□□□□□ -0.51
RPS3-210ENST00000528439 ZFPM1Q8IX07 1006 aa11.86□□□□□ -0.51
RPS3-210ENST00000528439 FBXL16Q8N461 479 aa11.86□□□□□ -0.51
RPS3-210ENST00000528439 IL27Q8NEV9 243 aa11.86□□□□□ -0.51
RPS3-210ENST00000528439 ZBED3Q96IU2 234 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms