RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 ABI2Q9NYB9 513 aaPredicted RBP5.39□□□□□ -1.55
CLNS1A-208ENST00000527265 KLHL42Q9P2K6 505 aa5.39□□□□□ -1.55
CLNS1A-208ENST00000527265 POLIQ9UNA4 740 aa5.39□□□□□ -1.55
CLNS1A-208ENST00000527265 hCG_2014768A0A024R1R8 64 aa5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 PRPF40AO75400 957 aaKnown RBP5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 PDGFAP04085 211 aa5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 LDHBP07195 334 aaKnown RBP5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 ZSCAN22P10073 491 aaPredicted RBP5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 CFPP27918 469 aa5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 MZF1P28698 734 aaPredicted RBP5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 ZNF76P36508 570 aa5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 MESP2Q0VG99 397 aa5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 TCEAL1Q15170 157 aa5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 ADAMTSL4Q6UY14 1074 aa5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 ZNF765Q7L2R6 523 aa5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 TMC4Q7Z404 712 aa5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 JAZF1Q86VZ6 243 aa5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 EZH1Q92800 747 aaPredicted RBP5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 CITED4Q96RK1 184 aa5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 DUSP9Q99956 384 aaKnown RBP5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 LMCD1Q9NZU5 365 aa5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 VTI1BQ9UEU0 232 aa5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 SUGT1Q9Y2Z0 365 aa5.38□□□□□ -1.55
CLNS1A-208ENST00000527265 PLEKHD1A6NEE1 506 aa5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 SORBS3O60504 671 aa5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 EIF4EBP3O60516 100 aaPredicted RBP5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 TSPAN15O95858 294 aa5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 FUT4P22083 530 aa5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 IGBP1P78318 339 aa5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 GNL2Q13823 731 aaKnown RBP5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 EXOSC6Q5RKV6 272 aaKnown RBP5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 GJD3Q8N144 294 aa5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 CEP120Q8N960 986 aa5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 PI4K2BQ8TCG2 481 aa5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 KCNB2Q92953 911 aa5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 FAM129BQ96TA1 746 aa5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 METTL14Q9HCE5 456 aaKnown RBP5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 RIPOR2Q9Y4F9 1068 aa5.37□□□□□ -1.55
CLNS1A-208ENST00000527265 DRD2P14416 443 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 PCSK2P16519 638 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 ITGAEP38570 1179 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 USP5P45974 858 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 MAPK8P45983 427 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 DAB2P98082 770 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 FGD1P98174 961 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 RBL2Q08999 1139 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 PDE3BQ13370 1112 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 DSC3Q14574 896 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 ZNF746Q6NUN9 644 aaPredicted RBP5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 LCNL1Q6ZST4 164 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 SPRED2Q7Z698 418 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 C2CD4AQ8NCU7 369 aaPredicted RBP5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 NUDT16Q96DE0 195 aaKnown RBP5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 DMRTB1Q96MA1 342 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 OSBPL2Q9H1P3 480 aa5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.36□□□□□ -1.55
CLNS1A-208ENST00000527265 LOC102724159A0A0B4J2E5 919 aa5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 LOC100289279A0A1B0GTE1 492 aa5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 GPR182O15218 404 aa5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 IGHA2P01877 340 aa5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 RNASE1P07998 156 aaKnown RBP5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 RAB6AP20340 208 aa5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 SOX4Q06945 474 aaPredicted RBP5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 PSMD2Q13200 908 aa5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 IKBKEQ14164 716 aa5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 PWP2Q15269 919 aaKnown RBP5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 MLANAQ16655 118 aa5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 C8orf34Q49A92 452 aa5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 CYP27C1Q4G0S4 372 aa5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 TTLL10Q6ZVT0 673 aa5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 ZNF526Q8TF50 670 aaPredicted RBP5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 UBE2Q2Q8WVN8 375 aa5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 GATA6Q92908 595 aa5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 SLC52A1Q9NWF4 448 aa5.35□□□□□ -1.55
CLNS1A-208ENST00000527265 A6NHS1 94 aa5.34□□□□□ -1.55
CLNS1A-208ENST00000527265 PDE2AO00408 941 aaPredicted RBP5.34□□□□□ -1.55
CLNS1A-208ENST00000527265 PLCB3Q01970 1234 aa5.34□□□□□ -1.55
CLNS1A-208ENST00000527265 ARID5AQ03989 594 aa5.34□□□□□ -1.55
CLNS1A-208ENST00000527265 EHHADHQ08426 723 aa5.34□□□□□ -1.55
CLNS1A-208ENST00000527265 BMS1Q14692 1282 aaKnown RBP5.34□□□□□ -1.55
CLNS1A-208ENST00000527265 KCNMB1Q16558 191 aa5.34□□□□□ -1.55
CLNS1A-208ENST00000527265 ZSWIM9Q86XI8 627 aa5.34□□□□□ -1.55
CLNS1A-208ENST00000527265 TTC16Q8NEE8 873 aa5.34□□□□□ -1.55
CLNS1A-208ENST00000527265 NIF3L1Q9GZT8 377 aa5.34□□□□□ -1.55
CLNS1A-208ENST00000527265 GGNBP2Q9H3C7 697 aa5.34□□□□□ -1.55
CLNS1A-208ENST00000527265 PARNO95453 639 aaKnown RBP5.33□□□□□ -1.56
CLNS1A-208ENST00000527265 RPLP1P05386 114 aaKnown RBP5.33□□□□□ -1.56
CLNS1A-208ENST00000527265 NFICP08651 508 aa5.33□□□□□ -1.56
CLNS1A-208ENST00000527265 IBSPP21815 317 aaPredicted RBP5.33□□□□□ -1.56
CLNS1A-208ENST00000527265 CTSWP56202 376 aa5.33□□□□□ -1.56
CLNS1A-208ENST00000527265 BNIP3Q12983 259 aa5.33□□□□□ -1.56
CLNS1A-208ENST00000527265 HP1BP3Q5SSJ5 553 aaPredicted RBP5.33□□□□□ -1.56
CLNS1A-208ENST00000527265 SOGA3Q5TF21 947 aa5.33□□□□□ -1.56
CLNS1A-208ENST00000527265 CCDC181Q5TID7 509 aa5.33□□□□□ -1.56
CLNS1A-208ENST00000527265 CILP2Q8IUL8 1156 aa5.33□□□□□ -1.56
CLNS1A-208ENST00000527265 LRRN4CLQ8ND94 238 aa5.33□□□□□ -1.56
CLNS1A-208ENST00000527265 ALKBH8Q96BT7 664 aaKnown RBP5.33□□□□□ -1.56
CLNS1A-208ENST00000527265 SETDB2Q96T68 719 aa5.33□□□□□ -1.56
CLNS1A-208ENST00000527265 MBNL3Q9NUK0 354 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms