RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 CYP2E1P05181 493 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-204ENST00000527253 MAP3K10Q02779 954 aa12.83□□□□□ -0.36
PRPF40B-204ENST00000527253 PPIL2Q13356 520 aa12.83□□□□□ -0.36
PRPF40B-204ENST00000527253 TTC39AQ5SRH9 613 aa12.83□□□□□ -0.36
PRPF40B-204ENST00000527253 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.36
PRPF40B-204ENST00000527253 SLF2Q8IX21 1173 aa12.83□□□□□ -0.36
PRPF40B-204ENST00000527253 ZNF512BQ96KM6 892 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-204ENST00000527253 PIH1D3Q9NQM4 214 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-204ENST00000527253 ZBTB40Q9NUA8 1239 aa12.83□□□□□ -0.36
PRPF40B-204ENST00000527253 HPS5Q9UPZ3 1129 aa12.83□□□□□ -0.36
PRPF40B-204ENST00000527253 BTBD19C9JJ37 291 aa12.82□□□□□ -0.36
PRPF40B-204ENST00000527253 ZAP70P43403 619 aa12.82□□□□□ -0.36
PRPF40B-204ENST00000527253 PPATQ06203 517 aa12.82□□□□□ -0.36
PRPF40B-204ENST00000527253 PICALMQ13492 652 aa12.82□□□□□ -0.36
PRPF40B-204ENST00000527253 MOGSQ13724 837 aa12.82□□□□□ -0.36
PRPF40B-204ENST00000527253 CCDC158Q5M9N0 1113 aa12.82□□□□□ -0.36
PRPF40B-204ENST00000527253 NOL9Q5SY16 702 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-204ENST00000527253 OTUD7BQ6GQQ9 843 aa12.82□□□□□ -0.36
PRPF40B-204ENST00000527253 ADGRA1Q86SQ6 560 aa12.82□□□□□ -0.36
PRPF40B-204ENST00000527253 LRP2BPQ9P2M1 347 aa12.82□□□□□ -0.36
PRPF40B-204ENST00000527253 LDHCP07864 332 aa12.81□□□□□ -0.36
PRPF40B-204ENST00000527253 CETPP11597 493 aa12.81□□□□□ -0.36
PRPF40B-204ENST00000527253 GSTO1P78417 241 aa12.81□□□□□ -0.36
PRPF40B-204ENST00000527253 SNAPC2Q13487 334 aa12.81□□□□□ -0.36
PRPF40B-204ENST00000527253 PKN2Q16513 984 aaKnown RBP12.81□□□□□ -0.36
PRPF40B-204ENST00000527253 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-204ENST00000527253 CD99L2Q8TCZ2 262 aa12.81□□□□□ -0.36
PRPF40B-204ENST00000527253 SH3RF3Q8TEJ3 882 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-204ENST00000527253 KCNH4Q9UQ05 1017 aa12.81□□□□□ -0.36
PRPF40B-204ENST00000527253 NDUFB9Q9Y6M9 179 aa12.81□□□□□ -0.36
PRPF40B-204ENST00000527253 MYO5AQ9Y4I1 1855 aaKnown RBP12.8□□□□□ -0.36
PRPF40B-204ENST00000527253 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
PRPF40B-204ENST00000527253 MS4A1P11836 297 aa12.8□□□□□ -0.36
PRPF40B-204ENST00000527253 SOX10P56693 466 aa12.8□□□□□ -0.36
PRPF40B-204ENST00000527253 TAF1CQ15572 869 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-204ENST00000527253 FBXO46Q6PJ61 603 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-204ENST00000527253 OTOP1Q7RTM1 612 aa12.8□□□□□ -0.36
PRPF40B-204ENST00000527253 ZSCAN29Q8IWY8 852 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-204ENST00000527253 IL1RAPL2Q9NP60 686 aa12.8□□□□□ -0.36
PRPF40B-204ENST00000527253 DDX19BQ9UMR2 479 aa12.8□□□□□ -0.36
PRPF40B-204ENST00000527253 TRIM17Q9Y577 477 aa12.8□□□□□ -0.36
PRPF40B-204ENST00000527253 DOCK2Q92608 1830 aa12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 FAM196BA6NMK8 535 aa12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 PTPRAP18433 802 aa12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 PPP4CP60510 307 aa12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 SP3Q02447 781 aa12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 RRP1BQ14684 758 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 NAA16Q6N069 864 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 AACSQ86V21 672 aa12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 RPAP2Q8IXW5 612 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 SCYL3Q8IZE3 742 aa12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 RHPN1Q8TCX5 695 aa12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 ANTXR1Q9H6X2 564 aa12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 ZFYVE28Q9HCC9 887 aa12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 AATFQ9NY61 560 aaKnown RBP eCLIP12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-204ENST00000527253 TBC1D12O60347 775 aa12.78□□□□□ -0.36
PRPF40B-204ENST00000527253 MAP4K4O95819 1239 aaPredicted RBP12.78□□□□□ -0.36
PRPF40B-204ENST00000527253 GPAT2Q6NUI2 795 aa12.78□□□□□ -0.36
PRPF40B-204ENST00000527253 CCDC84Q86UT8 332 aaPredicted RBP12.78□□□□□ -0.36
PRPF40B-204ENST00000527253 TEX11Q8IYF3 940 aa12.78□□□□□ -0.36
PRPF40B-204ENST00000527253 ERO1AQ96HE7 468 aa12.78□□□□□ -0.36
PRPF40B-204ENST00000527253 OSBPL5Q9H0X9 879 aaPredicted RBP12.78□□□□□ -0.36
PRPF40B-204ENST00000527253 APBB1O00213 710 aa12.77□□□□□ -0.37
PRPF40B-204ENST00000527253 TLR2O60603 784 aa12.77□□□□□ -0.37
PRPF40B-204ENST00000527253 CTNND1O60716 968 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-204ENST00000527253 DYNLL1P63167 89 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-204ENST00000527253 MLLT1Q03111 559 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-204ENST00000527253 ANKRD23Q86SG2 305 aa12.77□□□□□ -0.37
PRPF40B-204ENST00000527253 ERC1Q8IUD2 1116 aa12.77□□□□□ -0.37
PRPF40B-204ENST00000527253 ARHGAP39Q9C0H5 1083 aa12.77□□□□□ -0.37
PRPF40B-204ENST00000527253 ZCCHC17Q9NP64 241 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-204ENST00000527253 PTPN22Q9Y2R2 807 aa12.77□□□□□ -0.37
PRPF40B-204ENST00000527253 AFG3L2Q9Y4W6 797 aa12.77□□□□□ -0.37
PRPF40B-204ENST00000527253 ZHX2Q9Y6X8 837 aa12.77□□□□□ -0.37
PRPF40B-204ENST00000527253 PDHXO00330 501 aa12.76□□□□□ -0.37
PRPF40B-204ENST00000527253 CXCL11O14625 94 aa12.76□□□□□ -0.37
PRPF40B-204ENST00000527253 CTGFP29279 349 aa12.76□□□□□ -0.37
PRPF40B-204ENST00000527253 PDE3AQ14432 1141 aa12.76□□□□□ -0.37
PRPF40B-204ENST00000527253 HSP90AB4PQ58FF6 505 aa12.76□□□□□ -0.37
PRPF40B-204ENST00000527253 C17orf99Q6UX52 265 aa12.76□□□□□ -0.37
PRPF40B-204ENST00000527253 MAPKAPK5Q8IW41 473 aa12.76□□□□□ -0.37
PRPF40B-204ENST00000527253 TGFBRAP1Q8WUH2 860 aa12.76□□□□□ -0.37
PRPF40B-204ENST00000527253 EFCC1Q9HA90 598 aa12.76□□□□□ -0.37
PRPF40B-204ENST00000527253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.76□□□□□ -0.37
PRPF40B-204ENST00000527253 ADGRA2Q96PE1 1338 aa12.76□□□□□ -0.37
PRPF40B-204ENST00000527253 COL2A1P02458 1487 aaPredicted RBP12.76□□□□□ -0.37
PRPF40B-204ENST00000527253 A0A0G2JLL6 359 aaPredicted RBP12.75□□□□□ -0.37
PRPF40B-204ENST00000527253 ZSWIM8A7E2V4 1837 aa12.75□□□□□ -0.37
PRPF40B-204ENST00000527253 SIPA1L1O43166 1804 aa12.75□□□□□ -0.37
PRPF40B-204ENST00000527253 IDH1O75874 414 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-204ENST00000527253 BAG3O95817 575 aa12.75□□□□□ -0.37
PRPF40B-204ENST00000527253 CYP7A1P22680 504 aa12.75□□□□□ -0.37
PRPF40B-204ENST00000527253 JAG1P78504 1218 aa12.75□□□□□ -0.37
PRPF40B-204ENST00000527253 MAST2Q6P0Q8 1798 aa12.75□□□□□ -0.37
PRPF40B-204ENST00000527253 PRRT2Q7Z6L0 340 aaPredicted RBP12.75□□□□□ -0.37
PRPF40B-204ENST00000527253 PHIPQ8WWQ0 1821 aa12.75□□□□□ -0.37
PRPF40B-204ENST00000527253 KIF1BPQ96EK5 621 aa12.75□□□□□ -0.37
PRPF40B-204ENST00000527253 PICK1Q9NRD5 415 aa12.75□□□□□ -0.37
PRPF40B-204ENST00000527253 CPA4Q9UI42 421 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms