RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 COL16A1Q07092 1604 aaPredicted RBP4.98□□□□□ -1.61
C11orf54-204ENST00000527003 APAF1O14727 1248 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 CD97P48960 835 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 PSMA6P60900 246 aaKnown RBP4.98□□□□□ -1.61
C11orf54-204ENST00000527003 DPYDQ12882 1025 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 CHRNA2Q15822 529 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 NFE2L2Q16236 605 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 PLEKHO1Q53GL0 409 aaPredicted RBP4.98□□□□□ -1.61
C11orf54-204ENST00000527003 MEX3CQ5U5Q3 659 aaKnown RBP4.98□□□□□ -1.61
C11orf54-204ENST00000527003 NBPF6Q5VWK0 638 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 TOM1L2Q6ZVM7 507 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 UNC5CLQ8IV45 518 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 WDR63Q8IWG1 891 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 TCP11L2Q8N4U5 519 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 C7orf43Q8WVR3 580 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 RAPGEF4Q8WZA2 1011 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 NGLY1Q96IV0 654 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 NBPF4Q96M43 638 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 NEUROD4Q9HD90 331 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 JPH1Q9HDC5 661 aaPredicted RBP4.98□□□□□ -1.61
C11orf54-204ENST00000527003 BTG4Q9NY30 223 aa4.98□□□□□ -1.61
C11orf54-204ENST00000527003 COL22A1Q8NFW1 1626 aaPredicted RBP4.97□□□□□ -1.61
C11orf54-204ENST00000527003 PHRF1Q9P1Y6 1649 aaKnown RBP4.97□□□□□ -1.61
C11orf54-204ENST00000527003 PHLPP1O60346 1717 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 FAM196BA6NMK8 535 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 PPP1R12BO60237 982 aaPredicted RBP4.97□□□□□ -1.61
C11orf54-204ENST00000527003 HSP90AB1P08238 724 aaKnown RBP4.97□□□□□ -1.61
C11orf54-204ENST00000527003 HMOX1P09601 288 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 TMPOP42166 694 aaKnown RBP4.97□□□□□ -1.61
C11orf54-204ENST00000527003 SEC13P55735 322 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 KCNQ4P56696 695 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 RIPK4P57078 832 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 LARP1Q6PKG0 1096 aaKnown RBP4.97□□□□□ -1.61
C11orf54-204ENST00000527003 PRR23CQ6ZRP0 262 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 ILDR2Q71H61 639 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 RAB44Q7Z6P3 723 aaPredicted RBP4.97□□□□□ -1.61
C11orf54-204ENST00000527003 CCDC146Q8IYE0 955 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 WFDC12Q8WWY7 111 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 RTF1Q92541 710 aaKnown RBP4.97□□□□□ -1.61
C11orf54-204ENST00000527003 YTHDC1Q96MU7 727 aaKnown RBP4.97□□□□□ -1.61
C11orf54-204ENST00000527003 ARXQ96QS3 562 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 SPG7Q9UQ90 795 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 HCN4Q9Y3Q4 1203 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 RBM19Q9Y4C8 960 aaKnown RBP4.97□□□□□ -1.61
C11orf54-204ENST00000527003 RNF114Q9Y508 228 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 CRB1P82279 1406 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 NCAPD2Q15021 1401 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 IL16Q14005 1332 aa4.97□□□□□ -1.61
C11orf54-204ENST00000527003 COL5A2P05997 1499 aaPredicted RBP4.96□□□□□ -1.62
C11orf54-204ENST00000527003 GNAT3A8MTJ3 354 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 E9PSI1 815 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 IL2RBP14784 551 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 TAL1P17542 331 aaPredicted RBP4.96□□□□□ -1.62
C11orf54-204ENST00000527003 RFX1P22670 979 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 HIRAP54198 1017 aaPredicted RBP4.96□□□□□ -1.62
C11orf54-204ENST00000527003 VPS72Q15906 364 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 C1orf141Q5JVX7 400 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 POTEAQ6S8J7 498 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 AEBP1Q8IUX7 1158 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 ANKMY2Q8IV38 441 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 DTWD1Q8N5C7 304 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 RHPN1Q8TCX5 695 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 SCG3Q8WXD2 468 aaKnown RBP4.96□□□□□ -1.62
C11orf54-204ENST00000527003 HSH2DQ96JZ2 352 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 C8orf37Q96NL8 207 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 CHMP4AQ9BY43 222 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 PHACTR1Q9C0D0 580 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 MYH16Q9H6N6 1097 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 VRTNQ9H8Y1 702 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 BABAM1Q9NWV8 329 aa4.96□□□□□ -1.62
C11orf54-204ENST00000527003 MAP2P11137 1827 aaKnown RBP4.95□□□□□ -1.62
C11orf54-204ENST00000527003 CT47B1P0C2W7 299 aaPredicted RBP4.95□□□□□ -1.62
C11orf54-204ENST00000527003 NOS3P29474 1203 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 SSTR4P31391 388 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 IREB2P48200 963 aaKnown RBP4.95□□□□□ -1.62
C11orf54-204ENST00000527003 AFF1P51825 1210 aaKnown RBP4.95□□□□□ -1.62
C11orf54-204ENST00000527003 MTHFSDQ2M296 383 aaKnown RBP4.95□□□□□ -1.62
C11orf54-204ENST00000527003 AKAP4Q5JQC9 854 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 ZNF772Q68DY9 489 aaPredicted RBP4.95□□□□□ -1.62
C11orf54-204ENST00000527003 IFNL2Q8IZJ0 200 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 ZCRB1Q8TBF4 217 aaKnown RBP4.95□□□□□ -1.62
C11orf54-204ENST00000527003 PHACTR3Q96KR7 559 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 BRD7Q9NPI1 651 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 TRPC5Q9UL62 973 aaPredicted RBP4.95□□□□□ -1.62
C11orf54-204ENST00000527003 SLC6A14Q9UN76 642 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 SLIT2O94813 1529 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 SHPRHQ149N8 1683 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 CAMTA1Q9Y6Y1 1673 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 SPATA31A1Q5TZJ5 1347 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 SPATA31A5Q5VU36 1347 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 SPATA31A7Q8IWB4 1347 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 ZNF521Q96K83 1311 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 PCDH11XQ9BZA7 1347 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 PCDH11YQ9BZA8 1340 aa4.95□□□□□ -1.62
C11orf54-204ENST00000527003 PEAK1Q9H792 1746 aa4.94□□□□□ -1.62
C11orf54-204ENST00000527003 MARF1Q9Y4F3 1742 aaKnown RBP4.94□□□□□ -1.62
C11orf54-204ENST00000527003 COL14A1Q05707 1796 aaKnown RBP4.94□□□□□ -1.62
C11orf54-204ENST00000527003 EXOC5O00471 708 aa4.94□□□□□ -1.62
C11orf54-204ENST00000527003 FSTP19883 344 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms