RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 UTYO14607 1347 aa24.64■■□□□ 1.54
AMBRA1-205ENST00000526606 NECAB2Q7Z6G3 386 aa24.64■■□□□ 1.54
AMBRA1-205ENST00000526606 ANKRD44Q8N8A2 993 aa24.64■■□□□ 1.54
AMBRA1-205ENST00000526606 KLHDC4Q8TBB5 520 aa24.64■■□□□ 1.54
AMBRA1-205ENST00000526606 MTMR10Q9NXD2 777 aa24.64■■□□□ 1.54
AMBRA1-205ENST00000526606 ZMYND8Q9ULU4 1186 aaPredicted RBP24.64■■□□□ 1.54
AMBRA1-205ENST00000526606 STXBP5LQ9Y2K9 1186 aa24.64■■□□□ 1.54
AMBRA1-205ENST00000526606 TNPO2O14787 897 aaKnown RBP24.63■■□□□ 1.53
AMBRA1-205ENST00000526606 SLURP2P0DP57 97 aa24.63■■□□□ 1.53
AMBRA1-205ENST00000526606 PTPRAP18433 802 aa24.63■■□□□ 1.53
AMBRA1-205ENST00000526606 SLC4A10Q6U841 1118 aa24.63■■□□□ 1.53
AMBRA1-205ENST00000526606 FASTKD5Q7L8L6 764 aaKnown RBP24.63■■□□□ 1.53
AMBRA1-205ENST00000526606 SRCIN1Q9C0H9 1055 aa24.63■■□□□ 1.53
AMBRA1-205ENST00000526606 DNAH12Q6ZR08 3092 aa24.63■■□□□ 1.53
AMBRA1-205ENST00000526606 LRIT3Q3SXY7 679 aa24.62■■□□□ 1.53
AMBRA1-205ENST00000526606 C7orf61Q8IZ16 206 aa24.62■■□□□ 1.53
AMBRA1-205ENST00000526606 SLC45A1Q9Y2W3 748 aa24.62■■□□□ 1.53
AMBRA1-205ENST00000526606 SPTBN5Q9NRC6 3674 aaKnown RBP24.62■■□□□ 1.53
AMBRA1-205ENST00000526606 PTPRFP10586 1907 aa24.61■■□□□ 1.53
AMBRA1-205ENST00000526606 NCBP3Q53F19 620 aaKnown RBP24.61■■□□□ 1.53
AMBRA1-205ENST00000526606 GADL1Q6ZQY3 521 aa24.61■■□□□ 1.53
AMBRA1-205ENST00000526606 SCYL3Q8IZE3 742 aa24.61■■□□□ 1.53
AMBRA1-205ENST00000526606 SPINK5Q9NQ38 1064 aaPredicted RBP24.61■■□□□ 1.53
AMBRA1-205ENST00000526606 USP40Q9NVE5 1235 aa24.61■■□□□ 1.53
AMBRA1-205ENST00000526606 KIF16BQ96L93 1317 aa24.61■■□□□ 1.53
AMBRA1-205ENST00000526606 MAP3K10Q02779 954 aa24.6■■□□□ 1.53
AMBRA1-205ENST00000526606 SH3BP5LQ7L8J4 393 aa24.6■■□□□ 1.53
AMBRA1-205ENST00000526606 WDR66Q8TBY9 1149 aa24.6■■□□□ 1.53
AMBRA1-205ENST00000526606 COL25A1Q9BXS0 654 aaPredicted RBP24.6■■□□□ 1.53
AMBRA1-205ENST00000526606 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.6■■□□□ 1.53
AMBRA1-205ENST00000526606 PHIPQ8WWQ0 1821 aa24.59■■□□□ 1.53
AMBRA1-205ENST00000526606 SYN1P17600 705 aa24.59■■□□□ 1.53
AMBRA1-205ENST00000526606 PRDX5P30044 214 aa24.59■■□□□ 1.53
AMBRA1-205ENST00000526606 MAGEA10P43363 369 aaPredicted RBP24.58■■□□□ 1.53
AMBRA1-205ENST00000526606 PUM3Q15397 648 aaKnown RBP24.58■■□□□ 1.53
AMBRA1-205ENST00000526606 ANKLE1Q8NAG6 615 aa24.58■■□□□ 1.53
AMBRA1-205ENST00000526606 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.58■■□□□ 1.53
AMBRA1-205ENST00000526606 TAOK2Q9UL54 1235 aa24.58■■□□□ 1.53
AMBRA1-205ENST00000526606 IFIT1P09914 478 aaKnown RBP24.57■■□□□ 1.52
AMBRA1-205ENST00000526606 TRIM32Q13049 653 aa24.57■■□□□ 1.52
AMBRA1-205ENST00000526606 WDR63Q8IWG1 891 aa24.57■■□□□ 1.52
AMBRA1-205ENST00000526606 ANKRD13CQ8N6S4 541 aa24.57■■□□□ 1.52
AMBRA1-205ENST00000526606 PRUNE2Q8WUY3 3088 aa24.57■■□□□ 1.52
AMBRA1-205ENST00000526606 CCDC84Q86UT8 332 aaPredicted RBP24.56■■□□□ 1.52
AMBRA1-205ENST00000526606 TDHQ8IZJ6 230 aa24.56■■□□□ 1.52
AMBRA1-205ENST00000526606 SMCR8Q8TEV9 937 aaPredicted RBP24.56■■□□□ 1.52
AMBRA1-205ENST00000526606 COA7Q96BR5 231 aa24.56■■□□□ 1.52
AMBRA1-205ENST00000526606 PICK1Q9NRD5 415 aa24.56■■□□□ 1.52
AMBRA1-205ENST00000526606 GJD2Q9UKL4 321 aa24.56■■□□□ 1.52
AMBRA1-205ENST00000526606 RGS3P49796 1198 aa24.55■■□□□ 1.52
AMBRA1-205ENST00000526606 TREML2Q5T2D2 321 aa24.55■■□□□ 1.52
AMBRA1-205ENST00000526606 MYH13Q9UKX3 1938 aa24.55■■□□□ 1.52
AMBRA1-205ENST00000526606 DDTLA6NHG4 134 aaPredicted RBP24.54■■□□□ 1.52
AMBRA1-205ENST00000526606 TRIM75PA6NK02 468 aa24.54■■□□□ 1.52
AMBRA1-205ENST00000526606 IDI2Q9BXS1 227 aa24.54■■□□□ 1.52
AMBRA1-205ENST00000526606 NBPF3Q9H094 633 aa24.54■■□□□ 1.52
AMBRA1-205ENST00000526606 AGTPBP1Q9UPW5 1226 aa24.54■■□□□ 1.52
AMBRA1-205ENST00000526606 SALL2Q9Y467 1007 aaPredicted RBP24.54■■□□□ 1.52
AMBRA1-205ENST00000526606 DOCK2Q92608 1830 aa24.54■■□□□ 1.52
AMBRA1-205ENST00000526606 RFX5P48382 616 aaPredicted RBP24.53■■□□□ 1.52
AMBRA1-205ENST00000526606 LPIN2Q92539 896 aa24.53■■□□□ 1.52
AMBRA1-205ENST00000526606 RPTORQ8N122 1335 aa24.53■■□□□ 1.52
AMBRA1-205ENST00000526606 ENTPD3O75355 529 aa24.52■■□□□ 1.52
AMBRA1-205ENST00000526606 HMGCRP04035 888 aa24.52■■□□□ 1.52
AMBRA1-205ENST00000526606 FAM110CQ1W6H9 321 aa24.52■■□□□ 1.52
AMBRA1-205ENST00000526606 OGDHLQ9ULD0 1010 aa24.52■■□□□ 1.52
AMBRA1-205ENST00000526606 RFX7Q2KHR2 1363 aa24.52■■□□□ 1.52
AMBRA1-205ENST00000526606 DDX60LQ5H9U9 1706 aaKnown RBP24.52■■□□□ 1.52
AMBRA1-205ENST00000526606 CTNND1O60716 968 aaKnown RBP24.51■■□□□ 1.51
AMBRA1-205ENST00000526606 LDHBP07195 334 aaKnown RBP24.51■■□□□ 1.51
AMBRA1-205ENST00000526606 ATG9AQ7Z3C6 839 aa24.51■■□□□ 1.51
AMBRA1-205ENST00000526606 C11orf49Q9H6J7 331 aa24.51■■□□□ 1.51
AMBRA1-205ENST00000526606 DDX4Q9NQI0 724 aaKnown RBP24.51■■□□□ 1.51
AMBRA1-205ENST00000526606 DOCK1Q14185 1865 aa24.5■■□□□ 1.51
AMBRA1-205ENST00000526606 SLC5A1P13866 664 aa24.5■■□□□ 1.51
AMBRA1-205ENST00000526606 ZEB1P37275 1124 aaPredicted RBP24.5■■□□□ 1.51
AMBRA1-205ENST00000526606 UBE2OQ9C0C9 1292 aaKnown RBP24.5■■□□□ 1.51
AMBRA1-205ENST00000526606 HMX1Q9NP08 348 aaPredicted RBP24.5■■□□□ 1.51
AMBRA1-205ENST00000526606 LRRFIP2Q9Y608 721 aaKnown RBP24.5■■□□□ 1.51
AMBRA1-205ENST00000526606 PFASO15067 1338 aa24.5■■□□□ 1.51
AMBRA1-205ENST00000526606 PLXNB2O15031 1838 aa24.49■■□□□ 1.51
AMBRA1-205ENST00000526606 EYA2O00167 538 aa24.49■■□□□ 1.51
AMBRA1-205ENST00000526606 SALL1Q9NSC2 1324 aa24.49■■□□□ 1.51
AMBRA1-205ENST00000526606 GAKO14976 1311 aa24.48■■□□□ 1.51
AMBRA1-205ENST00000526606 USP44Q9H0E7 712 aa24.48■■□□□ 1.51
AMBRA1-205ENST00000526606 MYH2Q9UKX2 1941 aa24.48■■□□□ 1.51
AMBRA1-205ENST00000526606 POTEB2H3BUK9 544 aa24.47■■□□□ 1.51
AMBRA1-205ENST00000526606 MAP3K21Q5TCX8 1036 aa24.47■■□□□ 1.51
AMBRA1-205ENST00000526606 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.47■■□□□ 1.51
AMBRA1-205ENST00000526606 ZSCAN29Q8IWY8 852 aaPredicted RBP24.47■■□□□ 1.51
AMBRA1-205ENST00000526606 TRIB2Q92519 343 aa24.47■■□□□ 1.51
AMBRA1-205ENST00000526606 GUCD1Q96NT3 240 aa24.47■■□□□ 1.51
AMBRA1-205ENST00000526606 COL6A1P12109 1028 aa24.46■■□□□ 1.51
AMBRA1-205ENST00000526606 SPP2Q13103 211 aa24.45■■□□□ 1.5
AMBRA1-205ENST00000526606 PROCA1Q8NCQ7 364 aaPredicted RBP24.45■■□□□ 1.5
AMBRA1-205ENST00000526606 PNMA3Q9UL41 463 aa24.45■■□□□ 1.5
AMBRA1-205ENST00000526606 PHKA1P46020 1223 aa24.44■■□□□ 1.5
AMBRA1-205ENST00000526606 GCLCP48506 637 aaPredicted RBP24.44■■□□□ 1.5
AMBRA1-205ENST00000526606 CDH23Q9H251 3354 aa24.44■■□□□ 1.5
AMBRA1-205ENST00000526606 FAM196BA6NMK8 535 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms