RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 UVSSAQ2YD98 709 aa6.88□□□□□ -1.31
USP48-211ENST00000526044 TPTE2Q6XPS3 522 aa6.88□□□□□ -1.31
USP48-211ENST00000526044 C12orf50Q8NA57 414 aaPredicted RBP6.88□□□□□ -1.31
USP48-211ENST00000526044 SUGCTQ9HAC7 445 aa6.88□□□□□ -1.31
USP48-211ENST00000526044 EFCAB5A4FU69 1503 aa6.87□□□□□ -1.31
USP48-211ENST00000526044 DISP1Q96F81 1524 aa6.87□□□□□ -1.31
USP48-211ENST00000526044 ARHGAP35Q9NRY4 1499 aa6.87□□□□□ -1.31
USP48-211ENST00000526044 PTPRGP23470 1445 aa6.87□□□□□ -1.31
USP48-211ENST00000526044 CTSBP07858 339 aa6.87□□□□□ -1.31
USP48-211ENST00000526044 TAL1P17542 331 aaPredicted RBP6.87□□□□□ -1.31
USP48-211ENST00000526044 ARNTP27540 789 aa6.87□□□□□ -1.31
USP48-211ENST00000526044 GIPC2Q8TF65 315 aa6.87□□□□□ -1.31
USP48-211ENST00000526044 FAM46AQ96IP4 442 aaKnown RBP6.87□□□□□ -1.31
USP48-211ENST00000526044 RAD18Q9NS91 495 aa6.87□□□□□ -1.31
USP48-211ENST00000526044 RNF114Q9Y508 228 aa6.87□□□□□ -1.31
USP48-211ENST00000526044 SAMM50Q9Y512 469 aa6.87□□□□□ -1.31
USP48-211ENST00000526044 SORBS3O60504 671 aa6.86□□□□□ -1.31
USP48-211ENST00000526044 ECEL1O95672 775 aa6.86□□□□□ -1.31
USP48-211ENST00000526044 GSTP1P09211 210 aaKnown RBP6.86□□□□□ -1.31
USP48-211ENST00000526044 NME2P22392 152 aa6.86□□□□□ -1.31
USP48-211ENST00000526044 CD97P48960 835 aa6.86□□□□□ -1.31
USP48-211ENST00000526044 HNRNPUQ00839 825 aaKnown RBP eCLIP6.86□□□□□ -1.31
USP48-211ENST00000526044 PDE3AQ14432 1141 aa6.86□□□□□ -1.31
USP48-211ENST00000526044 SULF2Q8IWU5 870 aa6.86□□□□□ -1.31
USP48-211ENST00000526044 FAM161BQ96MY7 647 aa6.86□□□□□ -1.31
USP48-211ENST00000526044 EMILIN2Q9BXX0 1053 aa6.86□□□□□ -1.31
USP48-211ENST00000526044 BCL11AQ9H165 835 aa6.86□□□□□ -1.31
USP48-211ENST00000526044 MRS2Q9HD23 443 aa6.86□□□□□ -1.31
USP48-211ENST00000526044 TTF2Q9UNY4 1162 aaKnown RBP6.86□□□□□ -1.31
USP48-211ENST00000526044 SAMD9Q5K651 1589 aa6.86□□□□□ -1.31
USP48-211ENST00000526044 ERCC6L2Q5T890 1561 aa6.86□□□□□ -1.31
USP48-211ENST00000526044 FHOD3Q2V2M9 1422 aa6.85□□□□□ -1.31
USP48-211ENST00000526044 ENC1O14682 589 aa6.85□□□□□ -1.31
USP48-211ENST00000526044 DHX15O43143 795 aaKnown RBP6.85□□□□□ -1.31
USP48-211ENST00000526044 FBXO24O75426 580 aa6.85□□□□□ -1.31
USP48-211ENST00000526044 TIAF1O95411 115 aa6.85□□□□□ -1.31
USP48-211ENST00000526044 PREPP48147 710 aa6.85□□□□□ -1.31
USP48-211ENST00000526044 SOX4Q06945 474 aaPredicted RBP6.85□□□□□ -1.31
USP48-211ENST00000526044 CYB5RLQ6IPT4 315 aa6.85□□□□□ -1.31
USP48-211ENST00000526044 SV2BQ7L1I2 683 aa6.85□□□□□ -1.31
USP48-211ENST00000526044 ARMC10Q8N2F6 343 aa6.85□□□□□ -1.31
USP48-211ENST00000526044 UTP4Q969X6 686 aaKnown RBP6.85□□□□□ -1.31
USP48-211ENST00000526044 ZC3H12CQ9C0D7 883 aaKnown RBP6.85□□□□□ -1.31
USP48-211ENST00000526044 KRT82Q9NSB4 513 aa6.85□□□□□ -1.31
USP48-211ENST00000526044 KIAA0556O60303 1618 aa6.85□□□□□ -1.31
USP48-211ENST00000526044 SYNGAP1Q96PV0 1343 aa6.84□□□□□ -1.31
USP48-211ENST00000526044 GAS2O43903 313 aaKnown RBP6.84□□□□□ -1.31
USP48-211ENST00000526044 AOC2O75106 756 aa6.84□□□□□ -1.31
USP48-211ENST00000526044 DRD2P14416 443 aa6.84□□□□□ -1.31
USP48-211ENST00000526044 GP2P55259 537 aaKnown RBP6.84□□□□□ -1.31
USP48-211ENST00000526044 AKAP4Q5JQC9 854 aa6.84□□□□□ -1.31
USP48-211ENST00000526044 PDZD3Q86UT5 571 aa6.84□□□□□ -1.31
USP48-211ENST00000526044 STK35Q8TDR2 534 aa6.84□□□□□ -1.31
USP48-211ENST00000526044 KCNB2Q92953 911 aa6.84□□□□□ -1.31
USP48-211ENST00000526044 MYRFLQ96LU7 910 aa6.84□□□□□ -1.31
USP48-211ENST00000526044 CCDC86Q9H6F5 360 aaKnown RBP6.84□□□□□ -1.31
USP48-211ENST00000526044 CBX8Q9HC52 389 aa6.84□□□□□ -1.31
USP48-211ENST00000526044 ARHGEF11O15085 1522 aa6.84□□□□□ -1.31
USP48-211ENST00000526044 FMN1Q68DA7 1419 aa6.84□□□□□ -1.32
USP48-211ENST00000526044 RIMBP3CA6NJZ7 1639 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 RIMBP3BA6NNM3 1639 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 RIMBP3Q9UFD9 1639 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 PAGE1O75459 146 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 SLFN14P0C7P3 912 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 BMP3P12645 472 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 LIG1P18858 919 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 BMP6P22004 513 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 GRIK1P39086 918 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 LRRC14Q15048 493 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 TAF1CQ15572 869 aaPredicted RBP6.83□□□□□ -1.32
USP48-211ENST00000526044 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.83□□□□□ -1.32
USP48-211ENST00000526044 FAM20CQ8IXL6 584 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 PODXL2Q9NZ53 605 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 VTI1BQ9UEU0 232 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 HIF3AQ9Y2N7 669 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 RAXQ9Y2V3 346 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 ARAP1Q96P48 1450 aa6.83□□□□□ -1.32
USP48-211ENST00000526044 IGLV1-40P01703 118 aa6.82□□□□□ -1.32
USP48-211ENST00000526044 CELA3AP09093 270 aa6.82□□□□□ -1.32
USP48-211ENST00000526044 CTSHP09668 335 aa6.82□□□□□ -1.32
USP48-211ENST00000526044 ADH5P11766 374 aa6.82□□□□□ -1.32
USP48-211ENST00000526044 ZNF16P17020 682 aaPredicted RBP6.82□□□□□ -1.32
USP48-211ENST00000526044 USP11P51784 963 aa6.82□□□□□ -1.32
USP48-211ENST00000526044 ZNF252P-AS1Q0IIN9 211 aa6.82□□□□□ -1.32
USP48-211ENST00000526044 FZD5Q13467 585 aa6.82□□□□□ -1.32
USP48-211ENST00000526044 CCDC85BQ15834 202 aaPredicted RBP6.82□□□□□ -1.32
USP48-211ENST00000526044 CRELD1Q96HD1 420 aa6.82□□□□□ -1.32
USP48-211ENST00000526044 WDR18Q9BV38 432 aa6.82□□□□□ -1.32
USP48-211ENST00000526044 STOML1Q9UBI4 398 aa6.82□□□□□ -1.32
USP48-211ENST00000526044 CYP8B1Q9UNU6 501 aa6.82□□□□□ -1.32
USP48-211ENST00000526044 USP31Q70CQ4 1352 aa6.82□□□□□ -1.32
USP48-211ENST00000526044 ARID1BQ8NFD5 2236 aaPredicted RBP6.81□□□□□ -1.32
USP48-211ENST00000526044 ZNF862O60290 1169 aa6.81□□□□□ -1.32
USP48-211ENST00000526044 ST13P50502 369 aaKnown RBP6.81□□□□□ -1.32
USP48-211ENST00000526044 KIF4BQ2VIQ3 1234 aa6.81□□□□□ -1.32
USP48-211ENST00000526044 MEI1Q5TIA1 1274 aa6.81□□□□□ -1.32
USP48-211ENST00000526044 PCNX4Q63HM2 1172 aa6.81□□□□□ -1.32
USP48-211ENST00000526044 MAP1SQ66K74 1059 aaPredicted RBP6.81□□□□□ -1.32
USP48-211ENST00000526044 SCARA3Q6AZY7 606 aa6.81□□□□□ -1.32
USP48-211ENST00000526044 LLGL2Q6P1M3 1020 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms