RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 MPP2Q14168 576 aa7.18□□□□□ -1.26
USP47-206ENST00000525367 TRAPPC3LQ5T215 181 aa7.18□□□□□ -1.26
USP47-206ENST00000525367 LRFN4Q6PJG9 635 aa7.18□□□□□ -1.26
USP47-206ENST00000525367 REC114Q7Z4M0 266 aa7.18□□□□□ -1.26
USP47-206ENST00000525367 DDX54Q8TDD1 881 aaKnown RBP7.18□□□□□ -1.26
USP47-206ENST00000525367 ACSBG1Q96GR2 724 aa7.18□□□□□ -1.26
USP47-206ENST00000525367 LRRC3Q9BY71 257 aa7.18□□□□□ -1.26
USP47-206ENST00000525367 ZNF408Q9H9D4 720 aa7.18□□□□□ -1.26
USP47-206ENST00000525367 PCDHA4Q9UN74 947 aa7.18□□□□□ -1.26
USP47-206ENST00000525367 A0A0A0MRY4 1105 aa7.17□□□□□ -1.26
USP47-206ENST00000525367 CYP11A1P05108 521 aa7.17□□□□□ -1.26
USP47-206ENST00000525367 MCM4P33991 863 aa7.17□□□□□ -1.26
USP47-206ENST00000525367 CD68P34810 354 aaPredicted RBP7.17□□□□□ -1.26
USP47-206ENST00000525367 ETFBP38117 255 aa7.17□□□□□ -1.26
USP47-206ENST00000525367 CLCQ05315 142 aa7.17□□□□□ -1.26
USP47-206ENST00000525367 WIPI1Q5MNZ9 446 aaPredicted RBP7.17□□□□□ -1.26
USP47-206ENST00000525367 LINC00114Q6XXX2 140 aa7.17□□□□□ -1.26
USP47-206ENST00000525367 GK5Q6ZS86 529 aa7.17□□□□□ -1.26
USP47-206ENST00000525367 CCDC84Q86UT8 332 aaPredicted RBP7.17□□□□□ -1.26
USP47-206ENST00000525367 KLHL23Q8NBE8 558 aa7.17□□□□□ -1.26
USP47-206ENST00000525367 PLPPR2Q96GM1 343 aa7.17□□□□□ -1.26
USP47-206ENST00000525367 SEC16BQ96JE7 1060 aa7.17□□□□□ -1.26
USP47-206ENST00000525367 LNPKQ9C0E8 428 aa7.17□□□□□ -1.26
USP47-206ENST00000525367 CORINQ9Y5Q5 1042 aa7.17□□□□□ -1.26
USP47-206ENST00000525367 CSADQ9Y600 493 aa7.17□□□□□ -1.26
USP47-206ENST00000525367 DCDC2CA8MYV0 355 aa7.16□□□□□ -1.26
USP47-206ENST00000525367 SSBP05455 408 aaKnown RBP eCLIP7.16□□□□□ -1.26
USP47-206ENST00000525367 FURINP09958 794 aa7.16□□□□□ -1.26
USP47-206ENST00000525367 RPL6Q02878 288 aaKnown RBP7.16□□□□□ -1.26
USP47-206ENST00000525367 DPH6Q7L8W6 267 aa7.16□□□□□ -1.26
USP47-206ENST00000525367 ANAPC16Q96DE5 110 aa7.16□□□□□ -1.26
USP47-206ENST00000525367 WDR18Q9BV38 432 aa7.16□□□□□ -1.26
USP47-206ENST00000525367 STK10O94804 968 aaKnown RBP7.15□□□□□ -1.26
USP47-206ENST00000525367 BPNT1O95861 308 aa7.15□□□□□ -1.26
USP47-206ENST00000525367 CWF19L2Q2TBE0 894 aaKnown RBP7.15□□□□□ -1.26
USP47-206ENST00000525367 ALYREFQ86V81 257 aaKnown RBP7.15□□□□□ -1.26
USP47-206ENST00000525367 FMR1NBQ8N0W7 255 aaPredicted RBP7.15□□□□□ -1.26
USP47-206ENST00000525367 FAM169BQ8N8A8 192 aa7.15□□□□□ -1.26
USP47-206ENST00000525367 SHDQ96IW2 340 aa7.15□□□□□ -1.26
USP47-206ENST00000525367 PLVAPQ9BX97 442 aa7.15□□□□□ -1.26
USP47-206ENST00000525367 ANTXR1Q9H6X2 564 aa7.15□□□□□ -1.26
USP47-206ENST00000525367 PCDHGC5Q9Y5F6 944 aa7.15□□□□□ -1.26
USP47-206ENST00000525367 GFRA2O00451 464 aa7.14□□□□□ -1.27
USP47-206ENST00000525367 DLL1O00548 723 aa7.14□□□□□ -1.27
USP47-206ENST00000525367 FBXW10Q5XX13 1052 aa7.14□□□□□ -1.27
USP47-206ENST00000525367 HNRNPLLQ8WVV9 542 aaKnown RBP7.14□□□□□ -1.27
USP47-206ENST00000525367 SRRTQ9BXP5 876 aaKnown RBP7.14□□□□□ -1.27
USP47-206ENST00000525367 ROBO2Q9HCK4 1378 aa7.14□□□□□ -1.27
USP47-206ENST00000525367 KRT82Q9NSB4 513 aa7.14□□□□□ -1.27
USP47-206ENST00000525367 PCDHB14Q9Y5E9 798 aa7.14□□□□□ -1.27
USP47-206ENST00000525367 AOC2O75106 756 aa7.13□□□□□ -1.27
USP47-206ENST00000525367 KIF4BQ2VIQ3 1234 aa7.13□□□□□ -1.27
USP47-206ENST00000525367 SHISA2Q6UWI4 295 aa7.13□□□□□ -1.27
USP47-206ENST00000525367 C12orf40Q86WS4 652 aa7.13□□□□□ -1.27
USP47-206ENST00000525367 FBXO11Q86XK2 927 aa7.13□□□□□ -1.27
USP47-206ENST00000525367 CPLX3Q8WVH0 158 aa7.13□□□□□ -1.27
USP47-206ENST00000525367 FERD3LQ96RJ6 166 aa7.13□□□□□ -1.27
USP47-206ENST00000525367 PPP1R9AQ9ULJ8 1098 aa7.13□□□□□ -1.27
USP47-206ENST00000525367 PRAMEF27A3QJZ7 478 aa7.12□□□□□ -1.27
USP47-206ENST00000525367 DNAJA2O60884 412 aa7.12□□□□□ -1.27
USP47-206ENST00000525367 COL8A1P27658 744 aa7.12□□□□□ -1.27
USP47-206ENST00000525367 RBL2Q08999 1139 aa7.12□□□□□ -1.27
USP47-206ENST00000525367 DUOXA2Q1HG44 320 aa7.12□□□□□ -1.27
USP47-206ENST00000525367 AKAP4Q5JQC9 854 aa7.12□□□□□ -1.27
USP47-206ENST00000525367 KIAA1211Q6ZU35 1233 aa7.12□□□□□ -1.27
USP47-206ENST00000525367 ANKS3Q6ZW76 656 aa7.12□□□□□ -1.27
USP47-206ENST00000525367 MAP4K3Q8IVH8 894 aa7.12□□□□□ -1.27
USP47-206ENST00000525367 AGGF1Q8N302 714 aaeCLIP7.12□□□□□ -1.27
USP47-206ENST00000525367 ARMC5Q96C12 935 aa7.12□□□□□ -1.27
USP47-206ENST00000525367 PIF1Q9H611 641 aa7.12□□□□□ -1.27
USP47-206ENST00000525367 ZNRF3Q9ULT6 936 aa7.12□□□□□ -1.27
USP47-206ENST00000525367 SMAD7O15105 426 aaKnown RBP7.11□□□□□ -1.27
USP47-206ENST00000525367 TMPRSS2O15393 492 aa7.11□□□□□ -1.27
USP47-206ENST00000525367 ZNF165P49910 485 aa7.11□□□□□ -1.27
USP47-206ENST00000525367 COL9A2Q14055 689 aaPredicted RBP7.11□□□□□ -1.27
USP47-206ENST00000525367 GRIK4Q16099 956 aa7.11□□□□□ -1.27
USP47-206ENST00000525367 CCDC144BQ3MJ40 725 aa7.11□□□□□ -1.27
USP47-206ENST00000525367 PPM1JQ5JR12 505 aa7.11□□□□□ -1.27
USP47-206ENST00000525367 RUFY4Q6ZNE9 571 aa7.11□□□□□ -1.27
USP47-206ENST00000525367 ACAD11Q709F0 780 aa7.11□□□□□ -1.27
USP47-206ENST00000525367 LSRQ86X29 649 aaPredicted RBP7.11□□□□□ -1.27
USP47-206ENST00000525367 DTWD1Q8N5C7 304 aa7.11□□□□□ -1.27
USP47-206ENST00000525367 ELMO3Q96BJ8 720 aa7.11□□□□□ -1.27
USP47-206ENST00000525367 GNB5O14775 395 aa7.1□□□□□ -1.27
USP47-206ENST00000525367 HTR3BO95264 441 aa7.1□□□□□ -1.27
USP47-206ENST00000525367 ITGB7P26010 798 aa7.1□□□□□ -1.27
USP47-206ENST00000525367 EIF6P56537 245 aaKnown RBP7.1□□□□□ -1.27
USP47-206ENST00000525367 RAC1P63000 192 aa7.1□□□□□ -1.27
USP47-206ENST00000525367 ZC3H12AQ5D1E8 599 aaKnown RBP7.1□□□□□ -1.27
USP47-206ENST00000525367 SCARA3Q6AZY7 606 aa7.1□□□□□ -1.27
USP47-206ENST00000525367 CYFIP1Q7L576 1253 aa7.1□□□□□ -1.27
USP47-206ENST00000525367 UBE3DQ7Z6J8 389 aa7.1□□□□□ -1.27
USP47-206ENST00000525367 KRTAP4-12Q9BQ66 201 aa7.1□□□□□ -1.27
USP47-206ENST00000525367 RUSC1Q9BVN2 902 aa7.1□□□□□ -1.27
USP47-206ENST00000525367 TMPRSS13Q9BYE2 586 aa7.1□□□□□ -1.27
USP47-206ENST00000525367 STRIP2Q9ULQ0 834 aa7.1□□□□□ -1.27
USP47-206ENST00000525367 HIF3AQ9Y2N7 669 aa7.1□□□□□ -1.27
USP47-206ENST00000525367 ALX3O95076 343 aa7.09□□□□□ -1.27
USP47-206ENST00000525367 DRD2P14416 443 aa7.09□□□□□ -1.27
USP47-206ENST00000525367 GIPRP48546 466 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms