RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 WEE1P30291 646 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 SEC13P55735 322 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 ZC3H6P61129 1189 aaKnown RBP5.02□□□□□ -1.61
CSDE1-209ENST00000525132 TEAD4Q15561 434 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 TAS1R3Q7RTX0 852 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 PRICKLE2Q7Z3G6 844 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 PNMA8AQ86V59 439 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-209ENST00000525132 SLC9A9Q8IVB4 645 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 TSEN2Q8NCE0 465 aaKnown RBP5.02□□□□□ -1.61
CSDE1-209ENST00000525132 PPM1EQ8WY54 764 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 HCN2Q9UL51 889 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 TRIM17Q9Y577 477 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 TROQ12816 1431 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-209ENST00000525132 ARHGAP31Q2M1Z3 1444 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 AKAP12Q02952 1782 aa5.01□□□□□ -1.61
CSDE1-209ENST00000525132 PI4K2BG5E9Z4 385 aa5.01□□□□□ -1.61
CSDE1-209ENST00000525132 RBAK-RBAKDNI3L0D1 243 aa5.01□□□□□ -1.61
CSDE1-209ENST00000525132 MMP10P09238 476 aa5.01□□□□□ -1.61
CSDE1-209ENST00000525132 RHOQP17081 205 aa5.01□□□□□ -1.61
CSDE1-209ENST00000525132 ITGA6P23229 1130 aa5.01□□□□□ -1.61
CSDE1-209ENST00000525132 AMIGO3Q86WK7 504 aa5.01□□□□□ -1.61
CSDE1-209ENST00000525132 CCDC97Q96F63 343 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-209ENST00000525132 TSPAN10Q9H1Z9 355 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-209ENST00000525132 CRISPLD1Q9H336 500 aa5.01□□□□□ -1.61
CSDE1-209ENST00000525132 SERTAD1Q9UHV2 236 aa5.01□□□□□ -1.61
CSDE1-209ENST00000525132 HACL1Q9UJ83 578 aa5.01□□□□□ -1.61
CSDE1-209ENST00000525132 NOVA2Q9UNW9 492 aaKnown RBP5.01□□□□□ -1.61
CSDE1-209ENST00000525132 SCN4AP35499 1836 aa5.01□□□□□ -1.61
CSDE1-209ENST00000525132 COL4A5P29400 1685 aa5.01□□□□□ -1.61
CSDE1-209ENST00000525132 TRPM7Q96QT4 1865 aa5□□□□□ -1.61
CSDE1-209ENST00000525132 ACIN1Q9UKV3 1341 aaKnown RBP5□□□□□ -1.61
CSDE1-209ENST00000525132 A0A1B0GTH6 734 aa5□□□□□ -1.61
CSDE1-209ENST00000525132 NFKBIEO00221 500 aa5□□□□□ -1.61
CSDE1-209ENST00000525132 RFX1P22670 979 aa5□□□□□ -1.61
CSDE1-209ENST00000525132 KRT76Q01546 638 aa5□□□□□ -1.61
CSDE1-209ENST00000525132 SWI5Q1ZZU3 235 aa5□□□□□ -1.61
CSDE1-209ENST00000525132 SH3PXD2AQ5TCZ1 1133 aa5□□□□□ -1.61
CSDE1-209ENST00000525132 TMEM164Q5U3C3 297 aa5□□□□□ -1.61
CSDE1-209ENST00000525132 GPR161Q8N6U8 529 aaKnown RBP5□□□□□ -1.61
CSDE1-209ENST00000525132 FLAD1Q8NFF5 587 aa5□□□□□ -1.61
CSDE1-209ENST00000525132 ZNF837Q96EG3 531 aaPredicted RBP5□□□□□ -1.61
CSDE1-209ENST00000525132 ZNF333Q96JL9 665 aa5□□□□□ -1.61
CSDE1-209ENST00000525132 CHAMP1Q96JM3 812 aa5□□□□□ -1.61
CSDE1-209ENST00000525132 NDFIP2Q9NV92 336 aa5□□□□□ -1.61
CSDE1-209ENST00000525132 ZDHHC3Q9NYG2 299 aa5□□□□□ -1.61
CSDE1-209ENST00000525132 PTPRZ1P23471 2315 aaPredicted RBP5□□□□□ -1.61
CSDE1-209ENST00000525132 MYO5BQ9ULV0 1848 aa5□□□□□ -1.61
CSDE1-209ENST00000525132 COL4A3Q01955 1670 aa4.99□□□□□ -1.61
CSDE1-209ENST00000525132 USP54Q70EL1 1684 aa4.99□□□□□ -1.61
CSDE1-209ENST00000525132 IGFBP4P22692 258 aa4.99□□□□□ -1.61
CSDE1-209ENST00000525132 CHRNA5P30532 468 aa4.99□□□□□ -1.61
CSDE1-209ENST00000525132 OTOP1Q7RTM1 612 aa4.99□□□□□ -1.61
CSDE1-209ENST00000525132 TRIM22Q8IYM9 498 aa4.99□□□□□ -1.61
CSDE1-209ENST00000525132 C1orf216Q8TAB5 229 aa4.99□□□□□ -1.61
CSDE1-209ENST00000525132 CLP1Q92989 425 aaKnown RBP4.99□□□□□ -1.61
CSDE1-209ENST00000525132 C2orf49Q9BVC5 232 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-209ENST00000525132 NIFKQ9BYG3 293 aaKnown RBP4.99□□□□□ -1.61
CSDE1-209ENST00000525132 FAM86C1Q9NVL1 165 aa4.99□□□□□ -1.61
CSDE1-209ENST00000525132 PTPN22Q9Y2R2 807 aa4.99□□□□□ -1.61
CSDE1-209ENST00000525132 ATRNL1Q5VV63 1379 aa4.99□□□□□ -1.61
CSDE1-209ENST00000525132 ROBO2Q9HCK4 1378 aa4.99□□□□□ -1.61
CSDE1-209ENST00000525132 KIF1AQ12756 1690 aa4.99□□□□□ -1.61
CSDE1-209ENST00000525132 SPEGQ15772 3267 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 CDC42BPAQ5VT25 1732 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 FKTNO75072 461 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 CAMTA2O94983 1202 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 F11P03951 625 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 MSX1P28360 303 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 TXLNAP40222 546 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 PLA2G4AP47712 749 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 PSMA6P60900 246 aaKnown RBP4.98□□□□□ -1.61
CSDE1-209ENST00000525132 GAS6Q14393 721 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 LBRQ14739 615 aaKnown RBP4.98□□□□□ -1.61
CSDE1-209ENST00000525132 DBN1Q16643 649 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 CDCA8Q53HL2 280 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 GNASQ5JWF2 1037 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 PRSS33Q8NF86 280 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 GAS2L2Q8NHY3 880 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 RMDN1Q96DB5 314 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 GMCL1Q96IK5 515 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 TTYH1Q9H313 450 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-209ENST00000525132 ZNF408Q9H9D4 720 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 TIMMDC1Q9NPL8 285 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 CCNL1Q9UK58 526 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-209ENST00000525132 MBD5Q9P267 1494 aa4.98□□□□□ -1.61
CSDE1-209ENST00000525132 EXOC5O00471 708 aa4.97□□□□□ -1.61
CSDE1-209ENST00000525132 PDIA4P13667 645 aaKnown RBP4.97□□□□□ -1.61
CSDE1-209ENST00000525132 NOS2P35228 1153 aa4.97□□□□□ -1.61
CSDE1-209ENST00000525132 HUNKP57058 714 aa4.97□□□□□ -1.61
CSDE1-209ENST00000525132 TBCELQ5QJ74 424 aa4.97□□□□□ -1.61
CSDE1-209ENST00000525132 BICDL1Q6ZP65 573 aa4.97□□□□□ -1.61
CSDE1-209ENST00000525132 UBE2Q1Q7Z7E8 422 aa4.97□□□□□ -1.61
CSDE1-209ENST00000525132 SHISA4Q96DD7 197 aa4.97□□□□□ -1.61
CSDE1-209ENST00000525132 UBE2OQ9C0C9 1292 aaKnown RBP4.97□□□□□ -1.61
CSDE1-209ENST00000525132 SLC52A1Q9NWF4 448 aa4.97□□□□□ -1.61
CSDE1-209ENST00000525132 KCNK4Q9NYG8 393 aa4.97□□□□□ -1.61
CSDE1-209ENST00000525132 GPC6Q9Y625 555 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-209ENST00000525132 ZFYVE26Q68DK2 2539 aa4.97□□□□□ -1.61
CSDE1-209ENST00000525132 ZBTB7CA1YPR0 619 aa4.96□□□□□ -1.62
CSDE1-209ENST00000525132 RNFT1Q5M7Z0 435 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms