RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 ZNF652Q9Y2D9 606 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 GSG1L2A8MUP6 293 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 ZBTB43O43298 467 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 CHAF1AQ13111 956 aaPredicted RBP6.32□□□□□ -1.4
CLINT1-208ENST00000524306 SUSD4Q5VX71 490 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 RESP18Q5W5W9 173 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 MARCH10Q8NA82 808 aaPredicted RBP6.32□□□□□ -1.4
CLINT1-208ENST00000524306 AIDAQ96BJ3 306 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 TRIM5Q9C035 493 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 GTF2E1P29083 439 aaPredicted RBP6.32□□□□□ -1.4
CLINT1-208ENST00000524306 IGHMBP2P38935 993 aaKnown RBP6.32□□□□□ -1.4
CLINT1-208ENST00000524306 TPM4P67936 248 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 RASGRF1Q13972 1273 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 SART3Q15020 963 aaKnown RBP6.32□□□□□ -1.4
CLINT1-208ENST00000524306 NT5DC1Q5TFE4 455 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 ALG1Q9BT22 464 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 BRIP1Q9BX63 1249 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 EPB41L4AQ9HCS5 686 aaPredicted RBP6.32□□□□□ -1.4
CLINT1-208ENST00000524306 CLIP2Q9UDT6 1046 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 WWC3Q9ULE0 1092 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 PYCARDQ9ULZ3 195 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 CLIC4Q9Y696 253 aa6.32□□□□□ -1.4
CLINT1-208ENST00000524306 ZNF202O95125 648 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 IARSP41252 1262 aaKnown RBP6.31□□□□□ -1.4
CLINT1-208ENST00000524306 CRKLP46109 303 aaKnown RBP6.31□□□□□ -1.4
CLINT1-208ENST00000524306 NDUFA8P51970 172 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 KRT40Q6A162 431 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 C11orf57Q6ZUT1 292 aaPredicted RBP6.31□□□□□ -1.4
CLINT1-208ENST00000524306 CCDC186Q7Z3E2 898 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 LRRC8AQ8IWT6 810 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 TRIML1Q8N9V2 468 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 CCDC150Q8NCX0 1101 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.31□□□□□ -1.4
CLINT1-208ENST00000524306 LTBP1Q14766 1721 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 CACNA1SQ13698 1873 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 LOC102724428A0A0B4J2F2 783 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 KIF28PB7ZC32 967 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 DEXIO95424 95 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 BMP15O95972 392 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 SLC3A2P08195 630 aaKnown RBP6.31□□□□□ -1.4
CLINT1-208ENST00000524306 PTGS1P23219 599 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 GPTP24298 496 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 SIK1P57059 783 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 SSRP1Q08945 709 aaKnown RBP6.31□□□□□ -1.4
CLINT1-208ENST00000524306 SF3A1Q15459 793 aaKnown RBP6.31□□□□□ -1.4
CLINT1-208ENST00000524306 RILPL1Q5EBL4 403 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 NBPF11Q86T75 865 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 VPS37DQ86XT2 251 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 MPHOSPH8Q99549 860 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 NAPBQ9H115 298 aa6.31□□□□□ -1.4
CLINT1-208ENST00000524306 GNL3LQ9NVN8 582 aaKnown RBP6.31□□□□□ -1.4
CLINT1-208ENST00000524306 BSDC1Q9NW68 430 aaPredicted RBP6.31□□□□□ -1.4
CLINT1-208ENST00000524306 HOOK1Q9UJC3 728 aaKnown RBP6.31□□□□□ -1.4
CLINT1-208ENST00000524306 BECN2A8MW95 431 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 UBAP1LF5GYI3 381 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 IDH1O75874 414 aaKnown RBP6.3□□□□□ -1.4
CLINT1-208ENST00000524306 MMP1P03956 469 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 CALM1P0DP23 149 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 CALM2P0DP24 149 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 CALM3P0DP25 149 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 PFKFB1P16118 471 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 HAND2P61296 217 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 SEMA3FQ13275 785 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 TRIM29Q14134 588 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 TMEM67Q5HYA8 995 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 KANK3Q6NY19 840 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 PI16Q6UXB8 463 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 MFSD6Q6ZSS7 791 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 NYAP1Q6ZVC0 841 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 SYNE4Q8N205 404 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 RNF26Q9BY78 433 aaPredicted RBP6.3□□□□□ -1.4
CLINT1-208ENST00000524306 GPHNQ9NQX3 736 aaPredicted RBP6.3□□□□□ -1.4
CLINT1-208ENST00000524306 ZSWIM5Q9P217 1185 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 CEP131Q9UPN4 1083 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 SLC12A7Q9Y666 1083 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 MYO5AQ9Y4I1 1855 aaKnown RBP6.3□□□□□ -1.4
CLINT1-208ENST00000524306 PSDA5PKW4 1024 aaPredicted RBP6.3□□□□□ -1.4
CLINT1-208ENST00000524306 GOLGA8AA7E2F4 631 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 CCP110O43303 1012 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 RANBP6O60518 1105 aaKnown RBP6.3□□□□□ -1.4
CLINT1-208ENST00000524306 MBD4O95243 580 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 CDC27P30260 824 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 NCAPHQ15003 741 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 SEC23AQ15436 765 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 CHST3Q7LGC8 479 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 FCHSD1Q86WN1 690 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 ANKRD7Q92527 254 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 SDF4Q9BRK5 362 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 RBM28Q9NW13 759 aaKnown RBP6.3□□□□□ -1.4
CLINT1-208ENST00000524306 DENND2AQ9ULE3 1009 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 LAMB1P07942 1786 aa6.3□□□□□ -1.4
CLINT1-208ENST00000524306 CCDC69A6NI79 296 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 B4E1Z4 1266 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 CBFA2T2O43439 604 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 PTPREP23469 700 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 SAFBQ15424 915 aaKnown RBP eCLIP6.29□□□□□ -1.4
CLINT1-208ENST00000524306 NOSTRINQ8IVI9 506 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 TRIM22Q8IYM9 498 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 MAGEB6Q8N7X4 407 aa6.29□□□□□ -1.4
CLINT1-208ENST00000524306 SPATA20Q8TB22 786 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms