RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 SLURP2P0DP57 97 aa12.34□□□□□ -0.43
LAMA4-220ENST00000523765 APOBEC3HQ6NTF7 200 aaKnown RBP12.34□□□□□ -0.43
LAMA4-220ENST00000523765 PUS3Q9BZE2 481 aaKnown RBP12.34□□□□□ -0.43
LAMA4-220ENST00000523765 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.34□□□□□ -0.43
LAMA4-220ENST00000523765 TAOK2Q9UL54 1235 aa12.34□□□□□ -0.43
LAMA4-220ENST00000523765 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
LAMA4-220ENST00000523765 CHMP3Q9Y3E7 222 aa12.34□□□□□ -0.43
LAMA4-220ENST00000523765 AK9Q5TCS8 1911 aa12.34□□□□□ -0.43
LAMA4-220ENST00000523765 HIBADHP31937 336 aaKnown RBP12.33□□□□□ -0.44
LAMA4-220ENST00000523765 GNAI1P63096 354 aa12.33□□□□□ -0.44
LAMA4-220ENST00000523765 CHAF1AQ13111 956 aaPredicted RBP12.33□□□□□ -0.44
LAMA4-220ENST00000523765 IFIT5Q13325 482 aaKnown RBP12.33□□□□□ -0.44
LAMA4-220ENST00000523765 PXYLP1Q8TE99 480 aa12.33□□□□□ -0.44
LAMA4-220ENST00000523765 TSR2Q969E8 191 aaKnown RBP12.33□□□□□ -0.44
LAMA4-220ENST00000523765 ZNF341Q9BYN7 854 aa12.33□□□□□ -0.44
LAMA4-220ENST00000523765 UBE2OQ9C0C9 1292 aaKnown RBP12.33□□□□□ -0.44
LAMA4-220ENST00000523765 ZNF112Q9UJU3 913 aa12.33□□□□□ -0.44
LAMA4-220ENST00000523765 PFASO15067 1338 aa12.33□□□□□ -0.44
LAMA4-220ENST00000523765 IRF5Q13568 498 aa12.32□□□□□ -0.44
LAMA4-220ENST00000523765 LMBR1LQ6UX01 489 aa12.32□□□□□ -0.44
LAMA4-220ENST00000523765 LDHAL6AQ6ZMR3 332 aa12.32□□□□□ -0.44
LAMA4-220ENST00000523765 FAM83AQ86UY5 434 aa12.32□□□□□ -0.44
LAMA4-220ENST00000523765 PARK7Q99497 189 aaKnown RBP12.32□□□□□ -0.44
LAMA4-220ENST00000523765 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.32□□□□□ -0.44
LAMA4-220ENST00000523765 DOCK2Q92608 1830 aa12.32□□□□□ -0.44
LAMA4-220ENST00000523765 RPAP1Q9BWH6 1393 aaPredicted RBP12.31□□□□□ -0.44
LAMA4-220ENST00000523765 APAF1O14727 1248 aa12.31□□□□□ -0.44
LAMA4-220ENST00000523765 TNPO2O14787 897 aaKnown RBP12.31□□□□□ -0.44
LAMA4-220ENST00000523765 MDM2Q00987 491 aaPredicted RBP12.31□□□□□ -0.44
LAMA4-220ENST00000523765 TCP10Q12799 353 aa12.31□□□□□ -0.44
LAMA4-220ENST00000523765 GSE1Q14687 1217 aa12.31□□□□□ -0.44
LAMA4-220ENST00000523765 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
LAMA4-220ENST00000523765 ZFPM1Q8IX07 1006 aa12.31□□□□□ -0.44
LAMA4-220ENST00000523765 TEKT1Q969V4 418 aa12.31□□□□□ -0.44
LAMA4-220ENST00000523765 ZDHHC15Q96MV8 337 aa12.31□□□□□ -0.44
LAMA4-220ENST00000523765 CNNM1Q9NRU3 951 aa12.31□□□□□ -0.44
LAMA4-220ENST00000523765 MAP3K13O43283 966 aa12.3□□□□□ -0.44
LAMA4-220ENST00000523765 NFIAQ12857 509 aa12.3□□□□□ -0.44
LAMA4-220ENST00000523765 DCAF15Q66K64 600 aa12.3□□□□□ -0.44
LAMA4-220ENST00000523765 FBXO33Q7Z6M2 555 aa12.3□□□□□ -0.44
LAMA4-220ENST00000523765 CCDC84Q86UT8 332 aaPredicted RBP12.3□□□□□ -0.44
LAMA4-220ENST00000523765 PRKRIP1Q9H875 184 aaPredicted RBP12.3□□□□□ -0.44
LAMA4-220ENST00000523765 MYH13Q9UKX3 1938 aa12.3□□□□□ -0.44
LAMA4-220ENST00000523765 REV3LO60673 3130 aa12.3□□□□□ -0.44
LAMA4-220ENST00000523765 DOCK1Q14185 1865 aa12.29□□□□□ -0.44
LAMA4-220ENST00000523765 MAST2Q6P0Q8 1798 aa12.29□□□□□ -0.44
LAMA4-220ENST00000523765 A0A0G2JLL6 359 aaPredicted RBP12.29□□□□□ -0.44
LAMA4-220ENST00000523765 ATMINO43313 823 aaPredicted RBP12.29□□□□□ -0.44
LAMA4-220ENST00000523765 COL9A1P20849 921 aa12.29□□□□□ -0.44
LAMA4-220ENST00000523765 HDLBPQ00341 1268 aaKnown RBP12.29□□□□□ -0.44
LAMA4-220ENST00000523765 FLIIQ13045 1269 aa12.29□□□□□ -0.44
LAMA4-220ENST00000523765 UBE4AQ14139 1066 aa12.29□□□□□ -0.44
LAMA4-220ENST00000523765 NOL9Q5SY16 702 aaKnown RBP12.29□□□□□ -0.44
LAMA4-220ENST00000523765 FKBP1CQ5VVH2 108 aa12.29□□□□□ -0.44
LAMA4-220ENST00000523765 GADL1Q6ZQY3 521 aa12.29□□□□□ -0.44
LAMA4-220ENST00000523765 PRRT2Q7Z6L0 340 aaPredicted RBP12.29□□□□□ -0.44
LAMA4-220ENST00000523765 DNAAF4Q8WXU2 420 aa12.29□□□□□ -0.44
LAMA4-220ENST00000523765 NBPF3Q9H094 633 aa12.29□□□□□ -0.44
LAMA4-220ENST00000523765 C11orf49Q9H6J7 331 aa12.29□□□□□ -0.44
LAMA4-220ENST00000523765 FRMPD3Q5JV73 1810 aa12.29□□□□□ -0.44
LAMA4-220ENST00000523765 ATRNL1Q5VV63 1379 aa12.29□□□□□ -0.44
LAMA4-220ENST00000523765 LTBP2Q14767 1821 aa12.28□□□□□ -0.44
LAMA4-220ENST00000523765 PHF20L1A8MW92 1017 aa12.28□□□□□ -0.44
LAMA4-220ENST00000523765 F6X3S4 739 aa12.28□□□□□ -0.44
LAMA4-220ENST00000523765 WDR43Q15061 677 aaKnown RBP eCLIP12.28□□□□□ -0.44
LAMA4-220ENST00000523765 LRRC26Q2I0M4 334 aa12.28□□□□□ -0.44
LAMA4-220ENST00000523765 FAM109BQ6ICB4 259 aaPredicted RBP12.28□□□□□ -0.44
LAMA4-220ENST00000523765 ANKRD13CQ8N6S4 541 aa12.28□□□□□ -0.44
LAMA4-220ENST00000523765 ANKLE1Q8NAG6 615 aa12.28□□□□□ -0.44
LAMA4-220ENST00000523765 LINS1Q8NG48 757 aa12.28□□□□□ -0.44
LAMA4-220ENST00000523765 FAM151AQ8WW52 585 aa12.28□□□□□ -0.44
LAMA4-220ENST00000523765 MYH16Q9H6N6 1097 aa12.28□□□□□ -0.44
LAMA4-220ENST00000523765 FAM198AQ9UFP1 575 aa12.28□□□□□ -0.44
LAMA4-220ENST00000523765 ZHX2Q9Y6X8 837 aa12.28□□□□□ -0.44
LAMA4-220ENST00000523765 CXCL11O14625 94 aa12.27□□□□□ -0.45
LAMA4-220ENST00000523765 FKBP5Q13451 457 aaPredicted RBP12.27□□□□□ -0.45
LAMA4-220ENST00000523765 RALBP1Q15311 655 aa12.27□□□□□ -0.45
LAMA4-220ENST00000523765 DIXDC1Q155Q3 683 aa12.27□□□□□ -0.45
LAMA4-220ENST00000523765 TREML2Q5T2D2 321 aa12.27□□□□□ -0.45
LAMA4-220ENST00000523765 CDC42EP5Q6NZY7 148 aa12.27□□□□□ -0.45
LAMA4-220ENST00000523765 CDX2Q99626 313 aaPredicted RBP12.27□□□□□ -0.45
LAMA4-220ENST00000523765 STK31Q9BXU1 1019 aa12.27□□□□□ -0.45
LAMA4-220ENST00000523765 TMOD2Q9NZR1 351 aa12.27□□□□□ -0.45
LAMA4-220ENST00000523765 GJD2Q9UKL4 321 aa12.27□□□□□ -0.45
LAMA4-220ENST00000523765 OGDHLQ9ULD0 1010 aa12.27□□□□□ -0.45
LAMA4-220ENST00000523765 AFG3L2Q9Y4W6 797 aa12.27□□□□□ -0.45
LAMA4-220ENST00000523765 LOC285556D6RIA3 1793 aa12.26□□□□□ -0.45
LAMA4-220ENST00000523765 PEX10O60683 326 aa12.26□□□□□ -0.45
LAMA4-220ENST00000523765 HMGCRP04035 888 aa12.26□□□□□ -0.45
LAMA4-220ENST00000523765 COL6A1P12109 1028 aa12.26□□□□□ -0.45
LAMA4-220ENST00000523765 PTPRAP18433 802 aa12.26□□□□□ -0.45
LAMA4-220ENST00000523765 CCDC57Q2TAC2 916 aa12.26□□□□□ -0.45
LAMA4-220ENST00000523765 LRRC24Q50LG9 513 aa12.26□□□□□ -0.45
LAMA4-220ENST00000523765 TAF7LQ5H9L4 462 aa12.26□□□□□ -0.45
LAMA4-220ENST00000523765 BEND3Q5T5X7 828 aa12.26□□□□□ -0.45
LAMA4-220ENST00000523765 MAFAQ8NHW3 353 aaPredicted RBP12.26□□□□□ -0.45
LAMA4-220ENST00000523765 TRIB2Q92519 343 aa12.26□□□□□ -0.45
LAMA4-220ENST00000523765 HOOK2Q96ED9 719 aa12.26□□□□□ -0.45
LAMA4-220ENST00000523765 KAZALD1Q96I82 304 aa12.26□□□□□ -0.45
LAMA4-220ENST00000523765 CIZ1Q9ULV3 898 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms