RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	RBAK-RBAKDN	I3L0D1	243 aa		7.87	□□□□□ -1.15
SREK1-213	ENST00000523655	LEFTY1	O75610	366 aa		7.87	□□□□□ -1.15
SREK1-213	ENST00000523655	CELA3A	P09093	270 aa		7.87	□□□□□ -1.15
SREK1-213	ENST00000523655	XRCC5	P13010	732 aa	Known RBP	7.87	□□□□□ -1.15
SREK1-213	ENST00000523655	NME2	P22392	152 aa		7.87	□□□□□ -1.15
SREK1-213	ENST00000523655	ZNF252P-AS1	Q0IIN9	211 aa		7.87	□□□□□ -1.15
SREK1-213	ENST00000523655	UBE3D	Q7Z6J8	389 aa		7.87	□□□□□ -1.15
SREK1-213	ENST00000523655	SMYD4	Q8IYR2	804 aa	Predicted RBP	7.87	□□□□□ -1.15
SREK1-213	ENST00000523655	ABI1	Q8IZP0	508 aa		7.87	□□□□□ -1.15
SREK1-213	ENST00000523655	KRT82	Q9NSB4	513 aa		7.87	□□□□□ -1.15
SREK1-213	ENST00000523655	CCDC39	Q9UFE4	941 aa		7.87	□□□□□ -1.15
SREK1-213	ENST00000523655	FAM87A	P0C7U9	286 aa		7.86	□□□□□ -1.15
SREK1-213	ENST00000523655	IRAK1	P51617	712 aa		7.86	□□□□□ -1.15
SREK1-213	ENST00000523655	DUSP27	Q5VZP5	1158 aa		7.86	□□□□□ -1.15
SREK1-213	ENST00000523655	OGFOD3	Q6PK18	319 aa		7.86	□□□□□ -1.15
SREK1-213	ENST00000523655	AEBP1	Q8IUX7	1158 aa		7.86	□□□□□ -1.15
SREK1-213	ENST00000523655	FAM181A	Q8N9Y4	354 aa		7.86	□□□□□ -1.15
SREK1-213	ENST00000523655	ISL2	Q96A47	359 aa		7.86	□□□□□ -1.15
SREK1-213	ENST00000523655	METTL22	Q9BUU2	404 aa	Predicted RBP	7.86	□□□□□ -1.15
SREK1-213	ENST00000523655	ATXN3L	Q9H3M9	355 aa		7.86	□□□□□ -1.15
SREK1-213	ENST00000523655	SYNGAP1	Q96PV0	1343 aa		7.85	□□□□□ -1.15
SREK1-213	ENST00000523655	DCDC2C	A8MYV0	355 aa		7.85	□□□□□ -1.15
SREK1-213	ENST00000523655	LDHB	P07195	334 aa	Known RBP	7.85	□□□□□ -1.15
SREK1-213	ENST00000523655	USP17L7	P0C7H9	530 aa		7.85	□□□□□ -1.15
SREK1-213	ENST00000523655	TAL1	P17542	331 aa	Predicted RBP	7.85	□□□□□ -1.15
SREK1-213	ENST00000523655	GSTT1	P30711	240 aa		7.85	□□□□□ -1.15
SREK1-213	ENST00000523655	ZC3H12A	Q5D1E8	599 aa	Known RBP	7.85	□□□□□ -1.15
SREK1-213	ENST00000523655	PPM1J	Q5JR12	505 aa		7.85	□□□□□ -1.15
SREK1-213	ENST00000523655	ACSBG1	Q96GR2	724 aa		7.85	□□□□□ -1.15
SREK1-213	ENST00000523655	SHROOM4	Q9ULL8	1493 aa		7.84	□□□□□ -1.15
SREK1-213	ENST00000523655	PTPN11	Q06124	597 aa	Predicted RBP	7.84	□□□□□ -1.15
SREK1-213	ENST00000523655	COL19A1	Q14993	1142 aa		7.84	□□□□□ -1.15
SREK1-213	ENST00000523655	ALG1L	Q6GMV1	187 aa		7.84	□□□□□ -1.15
SREK1-213	ENST00000523655	C12orf40	Q86WS4	652 aa		7.84	□□□□□ -1.15
SREK1-213	ENST00000523655	FBF1	Q8TES7	1133 aa		7.84	□□□□□ -1.15
SREK1-213	ENST00000523655	COL17A1	Q9UMD9	1497 aa	Predicted RBP	7.83	□□□□□ -1.16
SREK1-213	ENST00000523655	ZNF574	Q6ZN55	896 aa	Predicted RBP	7.83	□□□□□ -1.16
SREK1-213	ENST00000523655	C12orf49	Q9H741	205 aa		7.83	□□□□□ -1.16
SREK1-213	ENST00000523655	SSU72	Q9NP77	194 aa	Known RBP	7.83	□□□□□ -1.16
SREK1-213	ENST00000523655	ADGRE2	Q9UHX3	823 aa		7.83	□□□□□ -1.16
SREK1-213	ENST00000523655	ANGEL1	Q9UNK9	670 aa	Known RBP	7.83	□□□□□ -1.16
SREK1-213	ENST00000523655	ATP2B2	Q01814	1243 aa		7.82	□□□□□ -1.16
SREK1-213	ENST00000523655	BNIP3	Q12983	259 aa		7.82	□□□□□ -1.16
SREK1-213	ENST00000523655	PLD6	Q8N2A8	252 aa	Known RBP	7.82	□□□□□ -1.16
SREK1-213	ENST00000523655	CACNA2D2	Q9NY47	1150 aa		7.82	□□□□□ -1.16
SREK1-213	ENST00000523655	NTF4	P34130	210 aa		7.81	□□□□□ -1.16
SREK1-213	ENST00000523655	CD96	P40200	585 aa		7.81	□□□□□ -1.16
SREK1-213	ENST00000523655	CDK8	P49336	464 aa		7.81	□□□□□ -1.16
SREK1-213	ENST00000523655	CPSF6	Q16630	551 aa	Known RBP eCLIP	7.81	□□□□□ -1.16
SREK1-213	ENST00000523655	PCNX4	Q63HM2	1172 aa		7.81	□□□□□ -1.16
SREK1-213	ENST00000523655	SPRED2	Q7Z698	418 aa		7.81	□□□□□ -1.16
SREK1-213	ENST00000523655	TP53INP2	Q8IXH6	220 aa		7.81	□□□□□ -1.16
SREK1-213	ENST00000523655	EMILIN2	Q9BXX0	1053 aa		7.81	□□□□□ -1.16
SREK1-213	ENST00000523655	BSDC1	Q9NW68	430 aa	Predicted RBP	7.81	□□□□□ -1.16
SREK1-213	ENST00000523655	ANKRD33B	A6NCL7	494 aa		7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	PRNP	P04156	253 aa		7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	CYP27A1	Q02318	531 aa		7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	INPP5A	Q14642	412 aa		7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	LLGL2	Q6P1M3	1020 aa		7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	WFDC3	Q8IUB2	231 aa		7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	TOP6BL	Q8N6T0	577 aa		7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	RNF214	Q8ND24	703 aa		7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	FLCN	Q8NFG4	579 aa		7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	DUSP23	Q9BVJ7	150 aa		7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	SRCIN1	Q9C0H9	1055 aa		7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	PAK6	Q9NQU5	681 aa	Predicted RBP	7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	PCOLCE2	Q9UKZ9	415 aa		7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	PCDHA4	Q9UN74	947 aa		7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	SPG7	Q9UQ90	795 aa		7.8	□□□□□ -1.16
SREK1-213	ENST00000523655	ERVK-24	P63145	666 aa		7.79	□□□□□ -1.16
SREK1-213	ENST00000523655	VSIG10L	Q86VR7	867 aa		7.79	□□□□□ -1.16
SREK1-213	ENST00000523655	DUSP9	Q99956	384 aa	Known RBP	7.79	□□□□□ -1.16
SREK1-213	ENST00000523655	CEP44	Q9C0F1	390 aa		7.79	□□□□□ -1.16
SREK1-213	ENST00000523655	FAM8A1	Q9UBU6	413 aa		7.79	□□□□□ -1.16
SREK1-213	ENST00000523655	TTF2	Q9UNY4	1162 aa	Known RBP	7.79	□□□□□ -1.16
SREK1-213	ENST00000523655	BCL7C	Q8WUZ0	217 aa	Predicted RBP	7.78	□□□□□ -1.16
SREK1-213	ENST00000523655	PPM1H	Q9ULR3	514 aa		7.78	□□□□□ -1.16
SREK1-213	ENST00000523655	GIPC1	O14908	333 aa		7.77	□□□□□ -1.17
SREK1-213	ENST00000523655	TRIM37	O94972	964 aa		7.77	□□□□□ -1.17
SREK1-213	ENST00000523655	MAP3K11	Q16584	847 aa		7.77	□□□□□ -1.17
SREK1-213	ENST00000523655	CYP27C1	Q4G0S4	372 aa		7.77	□□□□□ -1.17
SREK1-213	ENST00000523655	LRFN4	Q6PJG9	635 aa		7.77	□□□□□ -1.17
SREK1-213	ENST00000523655	HEXIM2	Q96MH2	286 aa	Known RBP	7.77	□□□□□ -1.17
SREK1-213	ENST00000523655	KRTAP4-12	Q9BQ66	201 aa		7.77	□□□□□ -1.17
SREK1-213	ENST00000523655	PICK1	Q9NRD5	415 aa		7.77	□□□□□ -1.17
SREK1-213	ENST00000523655	ITIH2	P19823	946 aa		7.76	□□□□□ -1.17
SREK1-213	ENST00000523655	EIF4B	P23588	611 aa	Known RBP	7.76	□□□□□ -1.17
SREK1-213	ENST00000523655	GNA15	P30679	374 aa		7.76	□□□□□ -1.17
SREK1-213	ENST00000523655	TAGLN	Q01995	201 aa	Known RBP	7.76	□□□□□ -1.17
SREK1-213	ENST00000523655	RING1	Q06587	406 aa		7.76	□□□□□ -1.17
SREK1-213	ENST00000523655	SND1	Q7KZF4	910 aa	Known RBP eCLIP	7.76	□□□□□ -1.17
SREK1-213	ENST00000523655	FAM161B	Q96MY7	647 aa		7.76	□□□□□ -1.17
SREK1-213	ENST00000523655	PLAGL2	Q9UPG8	496 aa		7.76	□□□□□ -1.17
SREK1-213	ENST00000523655	PCDHB5	Q9Y5E4	795 aa		7.76	□□□□□ -1.17
SREK1-213	ENST00000523655	PRAMEF27	A3QJZ7	478 aa		7.75	□□□□□ -1.17
SREK1-213	ENST00000523655	OXCT1	P55809	520 aa		7.75	□□□□□ -1.17
SREK1-213	ENST00000523655	ZBTB37	Q5TC79	503 aa		7.75	□□□□□ -1.17
SREK1-213	ENST00000523655	MEI1	Q5TIA1	1274 aa		7.75	□□□□□ -1.17

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