RNA–Protein interactions for RNA: ENST00000523622.1

NPM1-211, Transcript of nucleophosmin 1, humanhuman

TSL 3

Gene NPM1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-211ENST00000523622 NFKB2Q00653 900 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 PTPN12Q05209 780 aaKnown RBP7.34□□□□□ -1.23
NPM1-211ENST00000523622 STK3Q13188 491 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 PIN1Q13526 163 aaPredicted RBP7.34□□□□□ -1.23
NPM1-211ENST00000523622 EIF4A2Q14240 407 aaKnown RBP7.34□□□□□ -1.23
NPM1-211ENST00000523622 CFAP58Q5T655 872 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 LRCH2Q5VUJ6 765 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 FAM180BQ6P0A1 224 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 FIP1L1Q6UN15 594 aaKnown RBP7.34□□□□□ -1.23
NPM1-211ENST00000523622 OTOP3Q7RTS5 596 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 THNSL2Q86YJ6 484 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 ANKRD18AQ8IVF6 992 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 IL17REQ8NFR9 667 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 LILRB1Q8NHL6 650 aaPredicted RBP7.34□□□□□ -1.23
NPM1-211ENST00000523622 NUP133Q8WUM0 1156 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 HNRNPLLQ8WVV9 542 aaKnown RBP7.34□□□□□ -1.23
NPM1-211ENST00000523622 MAML1Q92585 1016 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 JAKMIP2Q96AA8 810 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 MMTAG2Q9BU76 263 aaKnown RBP7.34□□□□□ -1.23
NPM1-211ENST00000523622 KIAA1586Q9HCI6 787 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 ATP8A2Q9NTI2 1148 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 BLOC1S4Q9NUP1 217 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 EXOC1Q9NV70 894 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 SEPT3Q9UH03 358 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 MCM8Q9UJA3 840 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 FBXL5Q9UKA1 691 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 BLOC1S6Q9UL45 172 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 TRPC6Q9Y210 931 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 PCDHB15Q9Y5E8 787 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 PCDHGB3Q9Y5G1 929 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 PCDHGA4Q9Y5G9 962 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 SNCAIPQ9Y6H5 919 aa7.34□□□□□ -1.23
NPM1-211ENST00000523622 RTCAO00442 366 aaKnown RBP7.33□□□□□ -1.24
NPM1-211ENST00000523622 ELL2O00472 640 aaPredicted RBP7.33□□□□□ -1.24
NPM1-211ENST00000523622 MUSKO15146 869 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 CTSHP09668 335 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 HSPA5P11021 654 aaKnown RBP7.33□□□□□ -1.24
NPM1-211ENST00000523622 MTHFD1P11586 935 aaKnown RBP7.33□□□□□ -1.24
NPM1-211ENST00000523622 SKIP12755 728 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 HSPA4P34932 840 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 MRE11P49959 708 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 CACNB1Q02641 598 aaPredicted RBP7.33□□□□□ -1.24
NPM1-211ENST00000523622 NSUN2Q08J23 767 aaKnown RBP eCLIP7.33□□□□□ -1.24
NPM1-211ENST00000523622 DPYDQ12882 1025 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 ELF2Q15723 593 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 C1orf228Q6PIY5 440 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 SYNE3Q6ZMZ3 975 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 DZIP1LQ8IYY4 767 aaKnown RBP7.33□□□□□ -1.24
NPM1-211ENST00000523622 TAB3Q8N5C8 712 aaPredicted RBP7.33□□□□□ -1.24
NPM1-211ENST00000523622 ANKRD49Q8WVL7 239 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 ZNF75CPQ92670 426 aaPredicted RBP7.33□□□□□ -1.24
NPM1-211ENST00000523622 USP6NLQ92738 828 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 NACC2Q96BF6 587 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 PRIMPOLQ96LW4 560 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 NLRP3Q96P20 1036 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 TRIM8Q9BZR9 551 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 ALG13Q9NP73 1137 aaKnown RBP7.33□□□□□ -1.24
NPM1-211ENST00000523622 MED4Q9NPJ6 270 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 TRPV5Q9NQA5 729 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 ZNHIT6Q9NWK9 470 aaKnown RBP7.33□□□□□ -1.24
NPM1-211ENST00000523622 ZFATQ9P243 1243 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 HERC5Q9UII4 1024 aaKnown RBP7.33□□□□□ -1.24
NPM1-211ENST00000523622 PCDHB8Q9UN66 801 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 PCDHB13Q9Y5F0 798 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 SQORQ9Y6N5 450 aa7.33□□□□□ -1.24
NPM1-211ENST00000523622 C2orf81A6NN90 581 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 VSTM5A8MXK1 200 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 TMCO5BA8MYB1 307 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 RASA4BC9J798 803 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 WASLO00401 505 aaPredicted RBP7.32□□□□□ -1.24
NPM1-211ENST00000523622 SPTLC2O15270 562 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 RASA4O43374 803 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 PLOD3O60568 738 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 MTRF1O75570 445 aaKnown RBP7.32□□□□□ -1.24
NPM1-211ENST00000523622 CNOT4O95628 575 aaKnown RBP7.32□□□□□ -1.24
NPM1-211ENST00000523622 MYCLP1P12525 358 aaPredicted RBP7.32□□□□□ -1.24
NPM1-211ENST00000523622 CAPN2P17655 700 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 CAPN3P20807 821 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 KRT20P35900 424 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 STAT3P40763 770 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 DGKGP49619 791 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 CSE1LP55060 971 aaKnown RBP7.32□□□□□ -1.24
NPM1-211ENST00000523622 PLCB3Q01970 1234 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 APOBRQ0VD83 1088 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 PRKG2Q13237 762 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 MOGSQ13724 837 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 KRT72Q14CN4 511 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 OCLNQ16625 522 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 BTN2A1Q7KYR7 527 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 CCDC144CPQ8IYA2 1237 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 NKAPQ8N5F7 415 aaKnown RBP7.32□□□□□ -1.24
NPM1-211ENST00000523622 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.32□□□□□ -1.24
NPM1-211ENST00000523622 LSMEM1Q8N8F7 131 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 NFATC2IPQ8NCF5 419 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 BRSK1Q8TDC3 778 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 CABLES1Q8TDN4 633 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 PXYLP1Q8TE99 480 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 EMID1Q96A84 441 aaPredicted RBP7.32□□□□□ -1.24
NPM1-211ENST00000523622 HOOK2Q96ED9 719 aa7.32□□□□□ -1.24
NPM1-211ENST00000523622 TRIM11Q96F44 468 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms