RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.24□□□□□ -0.93
CPNE3-207ENST00000523588 ITGB7P26010 798 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 GBP2P32456 591 aaPredicted RBP9.24□□□□□ -0.93
CPNE3-207ENST00000523588 CDK8P49336 464 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 ERVK-24P63145 666 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 LMNB2Q03252 620 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 RING1Q06587 406 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 PWP1Q13610 501 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 INPP5AQ14642 412 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 BEND4Q6ZU67 534 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 HS2ST1Q7LGA3 356 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 CLEC10AQ8IUN9 316 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 TRIM42Q8IWZ5 723 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 FAM83CQ9BQN1 747 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 MIR1-1HGQ9H1L0 117 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 ATXN3LQ9H3M9 355 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 ACSS3Q9H6R3 686 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 C7orf69Q9H7B7 122 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 METTL5Q9NRN9 209 aaKnown RBP9.24□□□□□ -0.93
CPNE3-207ENST00000523588 STOML1Q9UBI4 398 aa9.24□□□□□ -0.93
CPNE3-207ENST00000523588 DCDC2CA8MYV0 355 aa9.23□□□□□ -0.93
CPNE3-207ENST00000523588 PF4P02776 101 aa9.23□□□□□ -0.93
CPNE3-207ENST00000523588 ZNF76P36508 570 aa9.23□□□□□ -0.93
CPNE3-207ENST00000523588 CAMK2GQ13555 558 aaPredicted RBP9.23□□□□□ -0.93
CPNE3-207ENST00000523588 LRFN4Q6PJG9 635 aa9.23□□□□□ -0.93
CPNE3-207ENST00000523588 KCNF1Q9H3M0 494 aa9.23□□□□□ -0.93
CPNE3-207ENST00000523588 SEMA6BQ9H3T3 888 aa9.23□□□□□ -0.93
CPNE3-207ENST00000523588 GGT7Q9UJ14 662 aa9.23□□□□□ -0.93
CPNE3-207ENST00000523588 HMX2A2RU54 273 aa9.22□□□□□ -0.93
CPNE3-207ENST00000523588 SCAMP3O14828 347 aaKnown RBP9.22□□□□□ -0.93
CPNE3-207ENST00000523588 NEFMP07197 916 aa9.22□□□□□ -0.93
CPNE3-207ENST00000523588 RAB6AP20340 208 aa9.22□□□□□ -0.93
CPNE3-207ENST00000523588 GARTP22102 1010 aa9.22□□□□□ -0.93
CPNE3-207ENST00000523588 CCDC84Q86UT8 332 aaPredicted RBP9.22□□□□□ -0.93
CPNE3-207ENST00000523588 C12orf40Q86WS4 652 aa9.22□□□□□ -0.93
CPNE3-207ENST00000523588 SEMA6CQ9H3T2 930 aa9.22□□□□□ -0.93
CPNE3-207ENST00000523588 CSADQ9Y600 493 aa9.22□□□□□ -0.93
CPNE3-207ENST00000523588 MINDY4BA8MYZ0 360 aa9.21□□□□□ -0.94
CPNE3-207ENST00000523588 K7ELQ4 463 aaPredicted RBP9.21□□□□□ -0.94
CPNE3-207ENST00000523588 NFICP08651 508 aa9.21□□□□□ -0.94
CPNE3-207ENST00000523588 LMNB1P20700 586 aa9.21□□□□□ -0.94
CPNE3-207ENST00000523588 RXRBP28702 533 aa9.21□□□□□ -0.94
CPNE3-207ENST00000523588 NTF4P34130 210 aa9.21□□□□□ -0.94
CPNE3-207ENST00000523588 TTLL4Q14679 1199 aa9.21□□□□□ -0.94
CPNE3-207ENST00000523588 PPM1JQ5JR12 505 aa9.21□□□□□ -0.94
CPNE3-207ENST00000523588 BNC2Q6ZN30 1099 aaPredicted RBP9.21□□□□□ -0.94
CPNE3-207ENST00000523588 CYFIP1Q7L576 1253 aa9.21□□□□□ -0.94
CPNE3-207ENST00000523588 RNF214Q8ND24 703 aa9.21□□□□□ -0.94
CPNE3-207ENST00000523588 PLPPR2Q96GM1 343 aa9.21□□□□□ -0.94
CPNE3-207ENST00000523588 KCNQ5Q9NR82 932 aa9.21□□□□□ -0.94
CPNE3-207ENST00000523588 FAM95CA0A1B0GW59 222 aa9.2□□□□□ -0.94
CPNE3-207ENST00000523588 FAM221AA4D161 298 aa9.2□□□□□ -0.94
CPNE3-207ENST00000523588 GFRA2O00451 464 aa9.2□□□□□ -0.94
CPNE3-207ENST00000523588 ADAM23O75077 832 aa9.2□□□□□ -0.94
CPNE3-207ENST00000523588 RBM25P49756 843 aaKnown RBP9.2□□□□□ -0.94
CPNE3-207ENST00000523588 FAM160A1Q05DH4 1040 aa9.2□□□□□ -0.94
CPNE3-207ENST00000523588 METTL16Q86W50 562 aaKnown RBP9.2□□□□□ -0.94
CPNE3-207ENST00000523588 JARID2Q92833 1246 aaPredicted RBP9.2□□□□□ -0.94
CPNE3-207ENST00000523588 YIPF2Q9BWQ6 316 aa9.2□□□□□ -0.94
CPNE3-207ENST00000523588 SNCAIPQ9Y6H5 919 aa9.2□□□□□ -0.94
CPNE3-207ENST00000523588 F13A1P00488 732 aa9.19□□□□□ -0.94
CPNE3-207ENST00000523588 HCLS1P14317 486 aaPredicted RBP9.19□□□□□ -0.94
CPNE3-207ENST00000523588 FSTP19883 344 aa9.19□□□□□ -0.94
CPNE3-207ENST00000523588 WIPI1Q5MNZ9 446 aaPredicted RBP9.19□□□□□ -0.94
CPNE3-207ENST00000523588 SEZ6L2Q6UXD5 910 aa9.19□□□□□ -0.94
CPNE3-207ENST00000523588 HDXQ7Z353 690 aa9.19□□□□□ -0.94
CPNE3-207ENST00000523588 RNF34Q969K3 372 aa9.19□□□□□ -0.94
CPNE3-207ENST00000523588 ELMO3Q96BJ8 720 aa9.19□□□□□ -0.94
CPNE3-207ENST00000523588 PIDD1Q9HB75 910 aa9.19□□□□□ -0.94
CPNE3-207ENST00000523588 ADAMTS1Q9UHI8 967 aa9.19□□□□□ -0.94
CPNE3-207ENST00000523588 DYNC1LI2O43237 492 aaPredicted RBP9.18□□□□□ -0.94
CPNE3-207ENST00000523588 CILPO75339 1184 aa9.18□□□□□ -0.94
CPNE3-207ENST00000523588 HDLBPQ00341 1268 aaKnown RBP9.18□□□□□ -0.94
CPNE3-207ENST00000523588 RPL6Q02878 288 aaKnown RBP9.18□□□□□ -0.94
CPNE3-207ENST00000523588 NFKBIBQ15653 356 aa9.18□□□□□ -0.94
CPNE3-207ENST00000523588 PRSS36Q5K4E3 855 aa9.18□□□□□ -0.94
CPNE3-207ENST00000523588 ZBTB37Q5TC79 503 aa9.18□□□□□ -0.94
CPNE3-207ENST00000523588 RNF43Q68DV7 783 aa9.18□□□□□ -0.94
CPNE3-207ENST00000523588 FBXL19Q6PCT2 694 aa9.18□□□□□ -0.94
CPNE3-207ENST00000523588 SMYD4Q8IYR2 804 aaPredicted RBP9.18□□□□□ -0.94
CPNE3-207ENST00000523588 GATAD2BQ8WXI9 593 aa9.18□□□□□ -0.94
CPNE3-207ENST00000523588 ISL2Q96A47 359 aa9.18□□□□□ -0.94
CPNE3-207ENST00000523588 FANCGO15287 622 aa9.17□□□□□ -0.94
CPNE3-207ENST00000523588 EIF4A3P38919 411 aaKnown RBP9.17□□□□□ -0.94
CPNE3-207ENST00000523588 NFIAQ12857 509 aa9.17□□□□□ -0.94
CPNE3-207ENST00000523588 MAP7Q14244 749 aa9.17□□□□□ -0.94
CPNE3-207ENST00000523588 PAOXQ6QHF9 649 aa9.17□□□□□ -0.94
CPNE3-207ENST00000523588 GOLM1Q8NBJ4 401 aa9.17□□□□□ -0.94
CPNE3-207ENST00000523588 C1GALT1Q9NS00 363 aa9.17□□□□□ -0.94
CPNE3-207ENST00000523588 PRKAG2Q9UGJ0 569 aa9.17□□□□□ -0.94
CPNE3-207ENST00000523588 DAGLAQ9Y4D2 1042 aa9.17□□□□□ -0.94
CPNE3-207ENST00000523588 GREM1O60565 184 aa9.16□□□□□ -0.94
CPNE3-207ENST00000523588 RNGTTO60942 597 aaKnown RBP9.16□□□□□ -0.94
CPNE3-207ENST00000523588 IGLV1-40P01703 118 aa9.16□□□□□ -0.94
CPNE3-207ENST00000523588 ZNF394Q53GI3 561 aa9.16□□□□□ -0.94
CPNE3-207ENST00000523588 SNAP47Q5SQN1 464 aa9.16□□□□□ -0.94
CPNE3-207ENST00000523588 UBE3DQ7Z6J8 389 aa9.16□□□□□ -0.94
CPNE3-207ENST00000523588 GATA6Q92908 595 aa9.16□□□□□ -0.94
CPNE3-207ENST00000523588 PCOLCE2Q9UKZ9 415 aa9.16□□□□□ -0.94
CPNE3-207ENST00000523588 ADMP35318 185 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 2297.1 ms