RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 CXCL11O14625 94 aa14.61□□□□□ -0.07
SDCBP-211ENST00000523441 PDE8BO95263 885 aa14.61□□□□□ -0.07
SDCBP-211ENST00000523441 IFIT1P09914 478 aaKnown RBP14.61□□□□□ -0.07
SDCBP-211ENST00000523441 MNX1P50219 401 aaPredicted RBP14.61□□□□□ -0.07
SDCBP-211ENST00000523441 FASTKD5Q7L8L6 764 aaKnown RBP14.61□□□□□ -0.07
SDCBP-211ENST00000523441 COA7Q96BR5 231 aa14.61□□□□□ -0.07
SDCBP-211ENST00000523441 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.61□□□□□ -0.07
SDCBP-211ENST00000523441 FAM198AQ9UFP1 575 aa14.61□□□□□ -0.07
SDCBP-211ENST00000523441 DOCK1Q14185 1865 aa14.61□□□□□ -0.07
SDCBP-211ENST00000523441 ALDH1L1O75891 902 aa14.6□□□□□ -0.07
SDCBP-211ENST00000523441 PRDX5P30044 214 aa14.6□□□□□ -0.07
SDCBP-211ENST00000523441 TRIM32Q13049 653 aa14.6□□□□□ -0.07
SDCBP-211ENST00000523441 PICALMQ13492 652 aa14.6□□□□□ -0.07
SDCBP-211ENST00000523441 CCDC27Q2M243 656 aa14.6□□□□□ -0.07
SDCBP-211ENST00000523441 NOL9Q5SY16 702 aaKnown RBP14.6□□□□□ -0.07
SDCBP-211ENST00000523441 LRRFIP2Q9Y608 721 aaKnown RBP14.6□□□□□ -0.07
SDCBP-211ENST00000523441 IL16Q14005 1332 aa14.6□□□□□ -0.07
SDCBP-211ENST00000523441 PHIPQ8WWQ0 1821 aa14.59□□□□□ -0.07
SDCBP-211ENST00000523441 A0A0G2JLL6 359 aaPredicted RBP14.59□□□□□ -0.07
SDCBP-211ENST00000523441 SLC5A1P13866 664 aa14.59□□□□□ -0.07
SDCBP-211ENST00000523441 PTPRAP18433 802 aa14.59□□□□□ -0.07
SDCBP-211ENST00000523441 MAGEA10P43363 369 aaPredicted RBP14.59□□□□□ -0.07
SDCBP-211ENST00000523441 RGS3P49796 1198 aa14.59□□□□□ -0.07
SDCBP-211ENST00000523441 PUM3Q15397 648 aaKnown RBP14.59□□□□□ -0.07
SDCBP-211ENST00000523441 PRRT2Q7Z6L0 340 aaPredicted RBP14.59□□□□□ -0.07
SDCBP-211ENST00000523441 SCYL3Q8IZE3 742 aa14.59□□□□□ -0.07
SDCBP-211ENST00000523441 VGLL2Q8N8G2 317 aa14.59□□□□□ -0.07
SDCBP-211ENST00000523441 WDR66Q8TBY9 1149 aa14.59□□□□□ -0.07
SDCBP-211ENST00000523441 GDF15Q99988 308 aa14.59□□□□□ -0.07
SDCBP-211ENST00000523441 UBE2OQ9C0C9 1292 aaKnown RBP14.59□□□□□ -0.07
SDCBP-211ENST00000523441 PAK6Q9NQU5 681 aaPredicted RBP14.59□□□□□ -0.07
SDCBP-211ENST00000523441 FAM196BA6NMK8 535 aa14.58□□□□□ -0.08
SDCBP-211ENST00000523441 LDHBP07195 334 aaKnown RBP14.58□□□□□ -0.08
SDCBP-211ENST00000523441 TREML2Q5T2D2 321 aa14.58□□□□□ -0.08
SDCBP-211ENST00000523441 ANKRD44Q8N8A2 993 aa14.58□□□□□ -0.08
SDCBP-211ENST00000523441 PXYLP1Q8TE99 480 aa14.58□□□□□ -0.08
SDCBP-211ENST00000523441 FAM161BQ96MY7 647 aa14.58□□□□□ -0.08
SDCBP-211ENST00000523441 MRIQ9BWK5 157 aa14.58□□□□□ -0.08
SDCBP-211ENST00000523441 SUGT1Q9Y2Z0 365 aa14.58□□□□□ -0.08
SDCBP-211ENST00000523441 AFG3L2Q9Y4W6 797 aa14.58□□□□□ -0.08
SDCBP-211ENST00000523441 COL25A1Q9BXS0 654 aaPredicted RBP14.57□□□□□ -0.08
SDCBP-211ENST00000523441 CRISPLD2Q9H0B8 497 aa14.57□□□□□ -0.08
SDCBP-211ENST00000523441 SIL1Q9H173 461 aa14.57□□□□□ -0.08
SDCBP-211ENST00000523441 ATAD5Q96QE3 1844 aa14.57□□□□□ -0.08
SDCBP-211ENST00000523441 PHF20L1A8MW92 1017 aa14.56□□□□□ -0.08
SDCBP-211ENST00000523441 IRF5Q13568 498 aa14.56□□□□□ -0.08
SDCBP-211ENST00000523441 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
SDCBP-211ENST00000523441 TDHQ8IZJ6 230 aa14.56□□□□□ -0.08
SDCBP-211ENST00000523441 NBPF3Q9H094 633 aa14.56□□□□□ -0.08
SDCBP-211ENST00000523441 C11orf49Q9H6J7 331 aa14.56□□□□□ -0.08
SDCBP-211ENST00000523441 HMX1Q9NP08 348 aaPredicted RBP14.56□□□□□ -0.08
SDCBP-211ENST00000523441 MTMR10Q9NXD2 777 aa14.56□□□□□ -0.08
SDCBP-211ENST00000523441 STXBP5LQ9Y2K9 1186 aa14.56□□□□□ -0.08
SDCBP-211ENST00000523441 UNC80Q8N2C7 3258 aa14.56□□□□□ -0.08
SDCBP-211ENST00000523441 HMGCRP04035 888 aa14.55□□□□□ -0.08
SDCBP-211ENST00000523441 CYP2B6P20813 491 aa14.55□□□□□ -0.08
SDCBP-211ENST00000523441 BMP8BP34820 402 aa14.55□□□□□ -0.08
SDCBP-211ENST00000523441 MDM2Q00987 491 aaPredicted RBP14.55□□□□□ -0.08
SDCBP-211ENST00000523441 SH3BP5LQ7L8J4 393 aa14.55□□□□□ -0.08
SDCBP-211ENST00000523441 DDTLA6NHG4 134 aaPredicted RBP14.54□□□□□ -0.08
SDCBP-211ENST00000523441 PEX10O60683 326 aa14.54□□□□□ -0.08
SDCBP-211ENST00000523441 FGFR2P21802 821 aa14.54□□□□□ -0.08
SDCBP-211ENST00000523441 RABL6Q3YEC7 729 aaPredicted RBP14.54□□□□□ -0.08
SDCBP-211ENST00000523441 LPIN2Q92539 896 aa14.54□□□□□ -0.08
SDCBP-211ENST00000523441 AGTPBP1Q9UPW5 1226 aa14.54□□□□□ -0.08
SDCBP-211ENST00000523441 PLXNB2O15031 1838 aa14.53□□□□□ -0.08
SDCBP-211ENST00000523441 RPTORQ8N122 1335 aa14.53□□□□□ -0.08
SDCBP-211ENST00000523441 DZIP1Q86YF9 867 aaKnown RBP14.53□□□□□ -0.08
SDCBP-211ENST00000523441 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.53□□□□□ -0.08
SDCBP-211ENST00000523441 ABCF2Q9UG63 623 aa14.53□□□□□ -0.08
SDCBP-211ENST00000523441 PNMA3Q9UL41 463 aa14.53□□□□□ -0.08
SDCBP-211ENST00000523441 ATRNL1Q5VV63 1379 aa14.52□□□□□ -0.08
SDCBP-211ENST00000523441 EYA2O00167 538 aa14.52□□□□□ -0.09
SDCBP-211ENST00000523441 PHKA1P46020 1223 aa14.52□□□□□ -0.09
SDCBP-211ENST00000523441 HMGCS2P54868 508 aa14.52□□□□□ -0.09
SDCBP-211ENST00000523441 SPP2Q13103 211 aa14.52□□□□□ -0.09
SDCBP-211ENST00000523441 MAPK8IP2Q13387 824 aaPredicted RBP14.52□□□□□ -0.09
SDCBP-211ENST00000523441 ATP2B3Q16720 1220 aa14.52□□□□□ -0.09
SDCBP-211ENST00000523441 WDR63Q8IWG1 891 aa14.52□□□□□ -0.09
SDCBP-211ENST00000523441 ANKLE1Q8NAG6 615 aa14.52□□□□□ -0.09
SDCBP-211ENST00000523441 DDX4Q9NQI0 724 aaKnown RBP14.52□□□□□ -0.09
SDCBP-211ENST00000523441 GNL3LQ9NVN8 582 aaKnown RBP14.52□□□□□ -0.09
SDCBP-211ENST00000523441 SLC45A1Q9Y2W3 748 aa14.52□□□□□ -0.09
SDCBP-211ENST00000523441 UTYO14607 1347 aa14.51□□□□□ -0.09
SDCBP-211ENST00000523441 CTNND1O60716 968 aaKnown RBP14.51□□□□□ -0.09
SDCBP-211ENST00000523441 ENTPD3O75355 529 aa14.51□□□□□ -0.09
SDCBP-211ENST00000523441 BTDP43251 543 aa14.51□□□□□ -0.09
SDCBP-211ENST00000523441 FAM110CQ1W6H9 321 aa14.51□□□□□ -0.09
SDCBP-211ENST00000523441 LRIT3Q3SXY7 679 aa14.51□□□□□ -0.09
SDCBP-211ENST00000523441 TRIB2Q92519 343 aa14.51□□□□□ -0.09
SDCBP-211ENST00000523441 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.51□□□□□ -0.09
SDCBP-211ENST00000523441 MRS2Q9HD23 443 aa14.51□□□□□ -0.09
SDCBP-211ENST00000523441 LOC285556D6RIA3 1793 aa14.51□□□□□ -0.09
SDCBP-211ENST00000523441 PFASO15067 1338 aa14.5□□□□□ -0.09
SDCBP-211ENST00000523441 KIF16BQ96L93 1317 aa14.5□□□□□ -0.09
SDCBP-211ENST00000523441 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
SDCBP-211ENST00000523441 ADORA1P30542 326 aa14.5□□□□□ -0.09
SDCBP-211ENST00000523441 GPR153Q6NV75 609 aa14.5□□□□□ -0.09
SDCBP-211ENST00000523441 ASCC2Q9H1I8 757 aaPredicted RBP14.5□□□□□ -0.09
SDCBP-211ENST00000523441 ATG9AQ7Z3C6 839 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms