RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 LCE5AQ5TCM9 118 aa6.04□□□□□ -1.44
PCM1-217ENST00000522998 USPL1Q5W0Q7 1092 aa6.04□□□□□ -1.44
PCM1-217ENST00000522998 ANKLE2Q86XL3 938 aa6.04□□□□□ -1.44
PCM1-217ENST00000522998 TOP6BLQ8N6T0 577 aa6.04□□□□□ -1.44
PCM1-217ENST00000522998 ASB11Q8WXH4 323 aa6.04□□□□□ -1.44
PCM1-217ENST00000522998 TNKS2Q9H2K2 1166 aa6.04□□□□□ -1.44
PCM1-217ENST00000522998 MTMR7Q9Y216 660 aa6.04□□□□□ -1.44
PCM1-217ENST00000522998 NCANO14594 1321 aa6.03□□□□□ -1.44
PCM1-217ENST00000522998 PRRG2O14669 202 aa6.03□□□□□ -1.44
PCM1-217ENST00000522998 ZP2Q05996 745 aa6.03□□□□□ -1.44
PCM1-217ENST00000522998 KIF4BQ2VIQ3 1234 aa6.03□□□□□ -1.44
PCM1-217ENST00000522998 SYDE1Q6ZW31 735 aaPredicted RBP6.03□□□□□ -1.44
PCM1-217ENST00000522998 SIAH1Q8IUQ4 282 aa6.03□□□□□ -1.44
PCM1-217ENST00000522998 SSU72Q9NP77 194 aaKnown RBP6.03□□□□□ -1.44
PCM1-217ENST00000522998 CTNND2Q9UQB3 1225 aa6.03□□□□□ -1.44
PCM1-217ENST00000522998 PCDHGC5Q9Y5F6 944 aa6.03□□□□□ -1.44
PCM1-217ENST00000522998 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.02□□□□□ -1.45
PCM1-217ENST00000522998 NEFLP07196 543 aa6.02□□□□□ -1.45
PCM1-217ENST00000522998 GSTP1P09211 210 aaKnown RBP6.02□□□□□ -1.45
PCM1-217ENST00000522998 ZSCAN22P10073 491 aaPredicted RBP6.02□□□□□ -1.45
PCM1-217ENST00000522998 AFMP43652 599 aa6.02□□□□□ -1.45
PCM1-217ENST00000522998 ZNF157P51786 506 aaPredicted RBP6.02□□□□□ -1.45
PCM1-217ENST00000522998 RPS26P11Q5JNZ5 115 aaPredicted RBP6.02□□□□□ -1.45
PCM1-217ENST00000522998 KRT82Q9NSB4 513 aa6.02□□□□□ -1.45
PCM1-217ENST00000522998 B8ZZF3 427 aa6.01□□□□□ -1.45
PCM1-217ENST00000522998 ABL1P00519 1130 aa6.01□□□□□ -1.45
PCM1-217ENST00000522998 FYB2Q5VWT5 728 aa6.01□□□□□ -1.45
PCM1-217ENST00000522998 MPZL3Q6UWV2 235 aa6.01□□□□□ -1.45
PCM1-217ENST00000522998 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.01□□□□□ -1.45
PCM1-217ENST00000522998 CCDC97Q96F63 343 aaPredicted RBP6.01□□□□□ -1.45
PCM1-217ENST00000522998 HEXIM2Q96MH2 286 aaKnown RBP6.01□□□□□ -1.45
PCM1-217ENST00000522998 ABCB6Q9NP58 842 aa6.01□□□□□ -1.45
PCM1-217ENST00000522998 NPHS2Q9NP85 383 aa6.01□□□□□ -1.45
PCM1-217ENST00000522998 ANO2Q9NQ90 1003 aa6.01□□□□□ -1.45
PCM1-217ENST00000522998 LMCD1Q9NZU5 365 aa6.01□□□□□ -1.45
PCM1-217ENST00000522998 NEFMP07197 916 aa6□□□□□ -1.45
PCM1-217ENST00000522998 GLI1P08151 1106 aa6□□□□□ -1.45
PCM1-217ENST00000522998 PRR23BQ6ZRT6 265 aa6□□□□□ -1.45
PCM1-217ENST00000522998 ISL2Q96A47 359 aa6□□□□□ -1.45
PCM1-217ENST00000522998 GTF2IRD1Q9UHL9 959 aa6□□□□□ -1.45
PCM1-217ENST00000522998 TMEM238LA0A1B0GVL6 79 aa5.99□□□□□ -1.45
PCM1-217ENST00000522998 FAAP100Q0VG06 881 aa5.99□□□□□ -1.45
PCM1-217ENST00000522998 ZNF211Q13398 564 aaPredicted RBP5.99□□□□□ -1.45
PCM1-217ENST00000522998 PRPF40BQ6NWY9 871 aaKnown RBP5.99□□□□□ -1.45
PCM1-217ENST00000522998 SPACA3Q8IXA5 215 aa5.99□□□□□ -1.45
PCM1-217ENST00000522998 IGF2BP3O00425 579 aaKnown RBP eCLIP5.98□□□□□ -1.45
PCM1-217ENST00000522998 NFIBO00712 420 aa5.98□□□□□ -1.45
PCM1-217ENST00000522998 CPNE3O75131 537 aaKnown RBP5.98□□□□□ -1.45
PCM1-217ENST00000522998 C1QTNF9P0C862 333 aa5.98□□□□□ -1.45
PCM1-217ENST00000522998 ECM1Q16610 540 aa5.98□□□□□ -1.45
PCM1-217ENST00000522998 TTLL10Q6ZVT0 673 aa5.98□□□□□ -1.45
PCM1-217ENST00000522998 KCNB2Q92953 911 aa5.98□□□□□ -1.45
PCM1-217ENST00000522998 KIRREL1Q96J84 757 aa5.98□□□□□ -1.45
PCM1-217ENST00000522998 RAPGEFL1Q9UHV5 662 aa5.98□□□□□ -1.45
PCM1-217ENST00000522998 BRPF3Q9ULD4 1205 aa5.98□□□□□ -1.45
PCM1-217ENST00000522998 TMEM88BA6NKF7 163 aa5.97□□□□□ -1.45
PCM1-217ENST00000522998 GADD45BO75293 160 aaPredicted RBP5.97□□□□□ -1.45
PCM1-217ENST00000522998 PPP2R3AQ06190 1150 aa5.97□□□□□ -1.45
PCM1-217ENST00000522998 ORC1Q13415 861 aa5.97□□□□□ -1.45
PCM1-217ENST00000522998 TMEM67Q5HYA8 995 aa5.97□□□□□ -1.45
PCM1-217ENST00000522998 CYFIP1Q7L576 1253 aa5.97□□□□□ -1.45
PCM1-217ENST00000522998 FAM214BQ7L5A3 538 aa5.97□□□□□ -1.45
PCM1-217ENST00000522998 RNF214Q8ND24 703 aa5.97□□□□□ -1.45
PCM1-217ENST00000522998 SERPINA10Q9UK55 444 aa5.97□□□□□ -1.45
PCM1-217ENST00000522998 TRAK1Q9UPV9 953 aa5.97□□□□□ -1.45
PCM1-217ENST00000522998 GNAT3A8MTJ3 354 aa5.96□□□□□ -1.46
PCM1-217ENST00000522998 BUD31P41223 144 aaPredicted RBP5.96□□□□□ -1.46
PCM1-217ENST00000522998 CLCN7P51798 805 aa5.96□□□□□ -1.46
PCM1-217ENST00000522998 ERVK-24P63145 666 aa5.96□□□□□ -1.46
PCM1-217ENST00000522998 NKPD1Q17RQ9 610 aa5.96□□□□□ -1.46
PCM1-217ENST00000522998 FBXO15Q8NCQ5 510 aaPredicted RBP5.96□□□□□ -1.46
PCM1-217ENST00000522998 PRDM10Q9NQV6 1147 aa5.96□□□□□ -1.46
PCM1-217ENST00000522998 GPN3Q9UHW5 284 aaPredicted RBP5.96□□□□□ -1.46
PCM1-217ENST00000522998 PITPNM2Q9BZ72 1349 aa5.96□□□□□ -1.46
PCM1-217ENST00000522998 KRT1P04264 644 aa5.95□□□□□ -1.46
PCM1-217ENST00000522998 ZC3H12AQ5D1E8 599 aaKnown RBP5.95□□□□□ -1.46
PCM1-217ENST00000522998 PDZD3Q86UT5 571 aa5.95□□□□□ -1.46
PCM1-217ENST00000522998 CCDC74AQ96AQ1 378 aa5.95□□□□□ -1.46
PCM1-217ENST00000522998 KRTAP17-1Q9BYP8 105 aa5.95□□□□□ -1.46
PCM1-217ENST00000522998 TMEM39AQ9NV64 488 aa5.95□□□□□ -1.46
PCM1-217ENST00000522998 NPIPB6E9PJ23 425 aa5.94□□□□□ -1.46
PCM1-217ENST00000522998 PDE3BQ13370 1112 aa5.94□□□□□ -1.46
PCM1-217ENST00000522998 PHLDB3Q6NSJ2 640 aa5.94□□□□□ -1.46
PCM1-217ENST00000522998 DTHD1Q6ZMT9 781 aa5.94□□□□□ -1.46
PCM1-217ENST00000522998 AMIGO3Q86WK7 504 aa5.94□□□□□ -1.46
PCM1-217ENST00000522998 DIRC2Q96SL1 478 aa5.94□□□□□ -1.46
PCM1-217ENST00000522998 KRTAP9-3Q9BYQ3 159 aa5.94□□□□□ -1.46
PCM1-217ENST00000522998 NSUN3Q9H649 340 aaKnown RBP5.94□□□□□ -1.46
PCM1-217ENST00000522998 CARS2Q9HA77 564 aaKnown RBP5.94□□□□□ -1.46
PCM1-217ENST00000522998 INHBBP09529 407 aa5.93□□□□□ -1.46
PCM1-217ENST00000522998 TMEM253P0C7T8 217 aa5.93□□□□□ -1.46
PCM1-217ENST00000522998 GRM2Q14416 872 aa5.93□□□□□ -1.46
PCM1-217ENST00000522998 SULF2Q8IWU5 870 aa5.93□□□□□ -1.46
PCM1-217ENST00000522998 NDUFB5O43674 189 aa5.92□□□□□ -1.46
PCM1-217ENST00000522998 ICMTO60725 284 aa5.92□□□□□ -1.46
PCM1-217ENST00000522998 GDNFP39905 211 aa5.92□□□□□ -1.46
PCM1-217ENST00000522998 MAP1SQ66K74 1059 aaPredicted RBP5.92□□□□□ -1.46
PCM1-217ENST00000522998 ACSBG1Q96GR2 724 aa5.92□□□□□ -1.46
PCM1-217ENST00000522998 DNAJC25Q9H1X3 360 aa5.92□□□□□ -1.46
PCM1-217ENST00000522998 C19orf73Q9NVV2 129 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms