RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 APPP05067 770 aa15.55■□□□□ 0.08
CPNE3-205ENST00000522240 ANP32AP39687 249 aaKnown RBP15.55■□□□□ 0.08
CPNE3-205ENST00000522240 TDO2P48775 406 aa15.55■□□□□ 0.08
CPNE3-205ENST00000522240 RHBDL3P58872 404 aa15.55■□□□□ 0.08
CPNE3-205ENST00000522240 RABEP1Q15276 862 aa15.55■□□□□ 0.08
CPNE3-205ENST00000522240 OGFOD1Q8N543 542 aa15.55■□□□□ 0.08
CPNE3-205ENST00000522240 MTMR14Q8NCE2 650 aa15.55■□□□□ 0.08
CPNE3-205ENST00000522240 SH3RF3Q8TEJ3 882 aaPredicted RBP15.55■□□□□ 0.08
CPNE3-205ENST00000522240 SDR42E1Q8WUS8 393 aa15.55■□□□□ 0.08
CPNE3-205ENST00000522240 DPF2Q92785 391 aa15.55■□□□□ 0.08
CPNE3-205ENST00000522240 DDRGK1Q96HY6 314 aa15.55■□□□□ 0.08
CPNE3-205ENST00000522240 TOMM70O94826 608 aa15.54■□□□□ 0.08
CPNE3-205ENST00000522240 CYP21A2P08686 494 aa15.54■□□□□ 0.08
CPNE3-205ENST00000522240 USP17L8P0C7I0 530 aa15.54■□□□□ 0.08
CPNE3-205ENST00000522240 APLP1P51693 650 aa15.54■□□□□ 0.08
CPNE3-205ENST00000522240 NUBP1P53384 320 aa15.54■□□□□ 0.08
CPNE3-205ENST00000522240 APOBEC3HQ6NTF7 200 aaKnown RBP15.54■□□□□ 0.08
CPNE3-205ENST00000522240 TEX11Q8IYF3 940 aa15.54■□□□□ 0.08
CPNE3-205ENST00000522240 TM6SF1Q9BZW5 370 aa15.54■□□□□ 0.08
CPNE3-205ENST00000522240 DCP1AQ9NPI6 582 aaPredicted RBP15.54■□□□□ 0.08
CPNE3-205ENST00000522240 RNF181Q9P0P0 153 aa15.54■□□□□ 0.08
CPNE3-205ENST00000522240 ARPP21Q9UBL0 812 aaPredicted RBP15.54■□□□□ 0.08
CPNE3-205ENST00000522240 BAZ2AQ9UIF9 1905 aaKnown RBP15.54■□□□□ 0.08
CPNE3-205ENST00000522240 COL2A1P02458 1487 aaPredicted RBP15.53■□□□□ 0.08
CPNE3-205ENST00000522240 USP5P45974 858 aa15.53■□□□□ 0.08
CPNE3-205ENST00000522240 ZNF280AP59817 542 aaPredicted RBP15.53■□□□□ 0.08
CPNE3-205ENST00000522240 CFAP100Q494V2 611 aa15.53■□□□□ 0.08
CPNE3-205ENST00000522240 SBK1Q52WX2 424 aa15.53■□□□□ 0.08
CPNE3-205ENST00000522240 REM2Q8IYK8 340 aaPredicted RBP15.53■□□□□ 0.08
CPNE3-205ENST00000522240 RASEFQ8IZ41 740 aa15.53■□□□□ 0.08
CPNE3-205ENST00000522240 GPC2Q8N158 579 aa15.53■□□□□ 0.08
CPNE3-205ENST00000522240 MKRN1Q9UHC7 482 aaKnown RBP15.53■□□□□ 0.08
CPNE3-205ENST00000522240 ANAPC4Q9UJX5 808 aa15.53■□□□□ 0.08
CPNE3-205ENST00000522240 ROBO3Q96MS0 1386 aa15.52■□□□□ 0.08
CPNE3-205ENST00000522240 FLT1P17948 1338 aa15.52■□□□□ 0.08
CPNE3-205ENST00000522240 ZNF213O14771 459 aa15.52■□□□□ 0.08
CPNE3-205ENST00000522240 PSMA5P28066 241 aa15.52■□□□□ 0.08
CPNE3-205ENST00000522240 C9orf131Q5VYM1 1079 aa15.52■□□□□ 0.08
CPNE3-205ENST00000522240 MYH1P12882 1939 aa15.51■□□□□ 0.07
CPNE3-205ENST00000522240 GMPSP49915 693 aaPredicted RBP15.51■□□□□ 0.07
CPNE3-205ENST00000522240 RBM5P52756 815 aaKnown RBP eCLIP15.51■□□□□ 0.07
CPNE3-205ENST00000522240 DLGAP5Q15398 846 aa15.51■□□□□ 0.07
CPNE3-205ENST00000522240 CDC42EP5Q6NZY7 148 aa15.51■□□□□ 0.07
CPNE3-205ENST00000522240 ZBED3Q96IU2 234 aaPredicted RBP15.51■□□□□ 0.07
CPNE3-205ENST00000522240 USP40Q9NVE5 1235 aa15.51■□□□□ 0.07
CPNE3-205ENST00000522240 WDHD1O75717 1129 aaPredicted RBP15.5■□□□□ 0.07
CPNE3-205ENST00000522240 AMOTL1Q8IY63 956 aa15.5■□□□□ 0.07
CPNE3-205ENST00000522240 TGFBRAP1Q8WUH2 860 aa15.5■□□□□ 0.07
CPNE3-205ENST00000522240 STAG1Q8WVM7 1258 aa15.5■□□□□ 0.07
CPNE3-205ENST00000522240 JAKMIP1Q96N16 626 aaKnown RBP15.5■□□□□ 0.07
CPNE3-205ENST00000522240 IDI2Q9BXS1 227 aa15.5■□□□□ 0.07
CPNE3-205ENST00000522240 CREBZFQ9NS37 354 aa15.5■□□□□ 0.07
CPNE3-205ENST00000522240 GJA3Q9Y6H8 435 aa15.5■□□□□ 0.07
CPNE3-205ENST00000522240 TAF6LQ9Y6J9 622 aa15.5■□□□□ 0.07
CPNE3-205ENST00000522240 E7EWF7 191 aa15.49■□□□□ 0.07
CPNE3-205ENST00000522240 HMGB1P09429 215 aaKnown RBP15.49■□□□□ 0.07
CPNE3-205ENST00000522240 PCP11498 1178 aaKnown RBP15.49■□□□□ 0.07
CPNE3-205ENST00000522240 NT5C2P49902 561 aa15.49■□□□□ 0.07
CPNE3-205ENST00000522240 HAND2P61296 217 aa15.49■□□□□ 0.07
CPNE3-205ENST00000522240 PPARAQ07869 468 aa15.49■□□□□ 0.07
CPNE3-205ENST00000522240 ADCK5Q3MIX3 580 aa15.49■□□□□ 0.07
CPNE3-205ENST00000522240 CTR9Q6PD62 1173 aa15.49■□□□□ 0.07
CPNE3-205ENST00000522240 STOX1Q6ZVD7 989 aa15.49■□□□□ 0.07
CPNE3-205ENST00000522240 NBPF3Q9H094 633 aa15.49■□□□□ 0.07
CPNE3-205ENST00000522240 RNF41Q9H4P4 317 aaPredicted RBP15.49■□□□□ 0.07
CPNE3-205ENST00000522240 ZSWIM6Q9HCJ5 1215 aa15.49■□□□□ 0.07
CPNE3-205ENST00000522240 MYOZ2Q9NPC6 264 aa15.49■□□□□ 0.07
CPNE3-205ENST00000522240 MCM9Q9NXL9 1143 aa15.49■□□□□ 0.07
CPNE3-205ENST00000522240 TMOD2Q9NZR1 351 aa15.49■□□□□ 0.07
CPNE3-205ENST00000522240 USP17L12C9JPN9 530 aa15.48■□□□□ 0.07
CPNE3-205ENST00000522240 USP17L21D6R901 530 aa15.48■□□□□ 0.07
CPNE3-205ENST00000522240 ST18O60284 1047 aa15.48■□□□□ 0.07
CPNE3-205ENST00000522240 CASTP20810 708 aaKnown RBP15.48■□□□□ 0.07
CPNE3-205ENST00000522240 FKBP1CQ5VVH2 108 aa15.48■□□□□ 0.07
CPNE3-205ENST00000522240 BLOC1S2Q6QNY1 142 aa15.48■□□□□ 0.07
CPNE3-205ENST00000522240 TBC1D10CQ8IV04 446 aa15.48■□□□□ 0.07
CPNE3-205ENST00000522240 MAPKAPK5Q8IW41 473 aa15.48■□□□□ 0.07
CPNE3-205ENST00000522240 MICALL2Q8IY33 904 aa15.48■□□□□ 0.07
CPNE3-205ENST00000522240 SNX21Q969T3 373 aa15.48■□□□□ 0.07
CPNE3-205ENST00000522240 PRMT6Q96LA8 375 aaPredicted RBP15.48■□□□□ 0.07
CPNE3-205ENST00000522240 NEK1Q96PY6 1258 aa15.48■□□□□ 0.07
CPNE3-205ENST00000522240 OSBPL5Q9H0X9 879 aaPredicted RBP15.48■□□□□ 0.07
CPNE3-205ENST00000522240 CNNM2Q9H8M5 875 aa15.48■□□□□ 0.07
CPNE3-205ENST00000522240 TAOK2Q9UL54 1235 aa15.48■□□□□ 0.07
CPNE3-205ENST00000522240 PCDHAC2Q9Y5I4 1007 aa15.48■□□□□ 0.07
CPNE3-205ENST00000522240 MYO1BO43795 1136 aa15.47■□□□□ 0.07
CPNE3-205ENST00000522240 ENTPD3O75355 529 aa15.47■□□□□ 0.07
CPNE3-205ENST00000522240 SLC3A2P08195 630 aaKnown RBP15.47■□□□□ 0.07
CPNE3-205ENST00000522240 TRDNQ13061 729 aa15.47■□□□□ 0.07
CPNE3-205ENST00000522240 AKNAD1Q5T1N1 836 aa15.47■□□□□ 0.07
CPNE3-205ENST00000522240 C12orf60Q5U649 245 aa15.47■□□□□ 0.07
CPNE3-205ENST00000522240 RALYLQ86SE5 291 aaKnown RBP15.47■□□□□ 0.07
CPNE3-205ENST00000522240 DNAJC5GQ8N7S2 189 aa15.47■□□□□ 0.07
CPNE3-205ENST00000522240 RBM46Q8TBY0 533 aaKnown RBP15.47■□□□□ 0.07
CPNE3-205ENST00000522240 DDX4Q9NQI0 724 aaKnown RBP15.47■□□□□ 0.07
CPNE3-205ENST00000522240 GPRC5DQ9NZD1 345 aa15.47■□□□□ 0.07
CPNE3-205ENST00000522240 CNOT7Q9UIV1 285 aaKnown RBP15.47■□□□□ 0.07
CPNE3-205ENST00000522240 CYP46A1Q9Y6A2 500 aa15.47■□□□□ 0.07
CPNE3-205ENST00000522240 ATRNL1Q5VV63 1379 aa15.47■□□□□ 0.07
CPNE3-205ENST00000522240 WDR19Q8NEZ3 1342 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms