RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 MCM4P33991 863 aa4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 CD68P34810 354 aaPredicted RBP4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 CLCQ05315 142 aa4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 AP3B2Q13367 1082 aa4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 LRRC14Q15048 493 aa4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 SF3A1Q15459 793 aaKnown RBP4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 WIPI1Q5MNZ9 446 aaPredicted RBP4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 SHISA2Q6UWI4 295 aa4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 GK5Q6ZS86 529 aa4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 FMR1NBQ8N0W7 255 aaPredicted RBP4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 CACTIN-AS1Q8N1I8 211 aa4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 AGGF1Q8N302 714 aaeCLIP4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 PMFBP1Q8TBY8 1022 aa4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 DDX54Q8TDD1 881 aaKnown RBP4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 PLPPR2Q96GM1 343 aa4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 GMLQ99445 158 aa4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 EMILIN2Q9BXX0 1053 aa4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 CORINQ9Y5Q5 1042 aa4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 TOPBP1Q92547 1522 aa4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 ERCC6Q03468 1493 aa4.03□□□□□ -1.76
CKS1BP7-201ENST00000522230 RBAK-RBAKDNI3L0D1 243 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 TRIM37O94972 964 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 CYP11A1P05108 521 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 ETFBP38117 255 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 GRIK4Q16099 956 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 FBXW10Q5XX13 1052 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 C12orf40Q86WS4 652 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 VPS37DQ86XT2 251 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 SLITRK4Q8IW52 837 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 KLHL23Q8NBE8 558 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 WNT8BQ93098 351 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 ANAPC16Q96DE5 110 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 WDR18Q9BV38 432 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 ANTXR1Q9H6X2 564 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 ZNF408Q9H9D4 720 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 CACNA2D2Q9NY47 1150 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 EEA1Q15075 1411 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 KIF27Q86VH2 1401 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 DNMBPQ6XZF7 1577 aa4.02□□□□□ -1.77
CKS1BP7-201ENST00000522230 POLA1P09884 1462 aaPredicted RBP4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 PRAMEF27A3QJZ7 478 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 ALX3O95076 343 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 BPNT1O95861 308 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 SSBP05455 408 aaKnown RBP eCLIP4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 DRD2P14416 443 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 SOX9P48436 509 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 RPL6Q02878 288 aaKnown RBP4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 MPP2Q14168 576 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 DUOXA2Q1HG44 320 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 AKAP4Q5JQC9 854 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 KIAA1211Q6ZU35 1233 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 ACAD11Q709F0 780 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 REC114Q7Z4M0 266 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 FBXO11Q86XK2 927 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 FAM169BQ8N8A8 192 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 UBXN4Q92575 508 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 LRRC3Q9BY71 257 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 LRRC4BQ9NT99 713 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 PPP1R9AQ9ULJ8 1098 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 PCDHB14Q9Y5E9 798 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 PDS5BQ9NTI5 1447 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 LAMC3Q9Y6N6 1575 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 TNIKQ9UKE5 1360 aa4.01□□□□□ -1.77
CKS1BP7-201ENST00000522230 FAM86C2PA6NEL3 165 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 GFRA2O00451 464 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 DNAJA2O60884 412 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 AOC2O75106 756 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 STK10O94804 968 aaKnown RBP4□□□□□ -1.77
CKS1BP7-201ENST00000522230 RAC1P63000 192 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 CWF19L2Q2TBE0 894 aaKnown RBP4□□□□□ -1.77
CKS1BP7-201ENST00000522230 PPM1JQ5JR12 505 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 RUFY4Q6ZNE9 571 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 DPH6Q7L8W6 267 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 UBE3DQ7Z6J8 389 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 CCDC84Q86UT8 332 aaPredicted RBP4□□□□□ -1.77
CKS1BP7-201ENST00000522230 CPLX3Q8WVH0 158 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 HNRNPLLQ8WVV9 542 aaKnown RBP4□□□□□ -1.77
CKS1BP7-201ENST00000522230 ELMO3Q96BJ8 720 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 SHDQ96IW2 340 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 SEC16BQ96JE7 1060 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 FERD3LQ96RJ6 166 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 RUSC1Q9BVN2 902 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 SRRTQ9BXP5 876 aaKnown RBP4□□□□□ -1.77
CKS1BP7-201ENST00000522230 LNPKQ9C0E8 428 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 ENAMQ9NRM1 1142 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 RAD18Q9NS91 495 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 AP4E1Q9UPM8 1137 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 PCDHGC5Q9Y5F6 944 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 CLIP1P30622 1438 aa4□□□□□ -1.77
CKS1BP7-201ENST00000522230 KIF21BO75037 1637 aa3.99□□□□□ -1.77
CKS1BP7-201ENST00000522230 GNB5O14775 395 aa3.99□□□□□ -1.77
CKS1BP7-201ENST00000522230 SMAD7O15105 426 aaKnown RBP3.99□□□□□ -1.77
CKS1BP7-201ENST00000522230 TMPRSS2O15393 492 aa3.99□□□□□ -1.77
CKS1BP7-201ENST00000522230 WIPF1O43516 503 aa3.99□□□□□ -1.77
CKS1BP7-201ENST00000522230 COL8A1P27658 744 aa3.99□□□□□ -1.77
CKS1BP7-201ENST00000522230 GRK4P32298 578 aa3.99□□□□□ -1.77
CKS1BP7-201ENST00000522230 TRIM28Q13263 835 aaKnown RBP3.99□□□□□ -1.77
CKS1BP7-201ENST00000522230 KIF4BQ2VIQ3 1234 aa3.99□□□□□ -1.77
CKS1BP7-201ENST00000522230 ZC3H12AQ5D1E8 599 aaKnown RBP3.99□□□□□ -1.77
CKS1BP7-201ENST00000522230 MAP4K3Q8IVH8 894 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms