RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 PRKAB2O43741 272 aa11.34□□□□□ -0.59
SHPRH-209ENST00000521977 LDHCP07864 332 aa11.34□□□□□ -0.59
SHPRH-209ENST00000521977 CASTP20810 708 aaKnown RBP11.34□□□□□ -0.59
SHPRH-209ENST00000521977 PSMA5P28066 241 aa11.34□□□□□ -0.59
SHPRH-209ENST00000521977 MCM2P49736 904 aa11.34□□□□□ -0.59
SHPRH-209ENST00000521977 EMP3P54852 163 aa11.34□□□□□ -0.59
SHPRH-209ENST00000521977 DYNLL1P63167 89 aaKnown RBP11.34□□□□□ -0.59
SHPRH-209ENST00000521977 DACT2Q5SW24 774 aa11.34□□□□□ -0.59
SHPRH-209ENST00000521977 GIMAP6Q6P9H5 292 aa11.34□□□□□ -0.59
SHPRH-209ENST00000521977 STOX1Q6ZVD7 989 aa11.34□□□□□ -0.59
SHPRH-209ENST00000521977 RUFY3Q7L099 469 aa11.34□□□□□ -0.59
SHPRH-209ENST00000521977 FBXO22Q8NEZ5 403 aa11.34□□□□□ -0.59
SHPRH-209ENST00000521977 UPF3BQ9BZI7 483 aaKnown RBP11.34□□□□□ -0.59
SHPRH-209ENST00000521977 ALDH8A1Q9H2A2 487 aaPredicted RBP11.34□□□□□ -0.59
SHPRH-209ENST00000521977 SLC4A4Q9Y6R1 1079 aa11.34□□□□□ -0.59
SHPRH-209ENST00000521977 MYH2Q9UKX2 1941 aa11.34□□□□□ -0.59
SHPRH-209ENST00000521977 ARFGEF1Q9Y6D6 1849 aa11.34□□□□□ -0.59
SHPRH-209ENST00000521977 LTBP3Q9NS15 1303 aa11.34□□□□□ -0.59
SHPRH-209ENST00000521977 COL4A5P29400 1685 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 TIAM2Q8IVF5 1701 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 GPR75-ASB3A0A0A6YYF3 556 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 USP17L3A6NCW0 530 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 USP17L4A6NCW7 530 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 YDJCA8MPS7 323 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 E7EWF7 191 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 STK25O00506 426 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 SLC4A3P48751 1232 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 IMMTQ16891 758 aaKnown RBP11.33□□□□□ -0.6
SHPRH-209ENST00000521977 USP17L1Q7RTZ2 530 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 CERS3Q8IU89 383 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 SLF2Q8IX21 1173 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 NLGN2Q8NFZ4 835 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 NEK1Q96PY6 1258 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 MRIQ9BWK5 157 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 KCNQ5Q9NR82 932 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 PPP1R1BQ9UD71 204 aaPredicted RBP11.33□□□□□ -0.6
SHPRH-209ENST00000521977 CYP46A1Q9Y6A2 500 aa11.33□□□□□ -0.6
SHPRH-209ENST00000521977 NFKBIEO00221 500 aa11.32□□□□□ -0.6
SHPRH-209ENST00000521977 ZNF213O14771 459 aa11.32□□□□□ -0.6
SHPRH-209ENST00000521977 APPP05067 770 aa11.32□□□□□ -0.6
SHPRH-209ENST00000521977 HMGB1P09429 215 aaKnown RBP11.32□□□□□ -0.6
SHPRH-209ENST00000521977 RPS6KB1P23443 525 aa11.32□□□□□ -0.6
SHPRH-209ENST00000521977 COL9A3Q14050 684 aaPredicted RBP11.32□□□□□ -0.6
SHPRH-209ENST00000521977 DIXDC1Q155Q3 683 aa11.32□□□□□ -0.6
SHPRH-209ENST00000521977 BLOC1S2Q6QNY1 142 aa11.32□□□□□ -0.6
SHPRH-209ENST00000521977 CRNKL1Q9BZJ0 848 aaKnown RBP11.32□□□□□ -0.6
SHPRH-209ENST00000521977 NACAP1Q9BZK3 213 aa11.32□□□□□ -0.6
SHPRH-209ENST00000521977 NBPF3Q9H094 633 aa11.32□□□□□ -0.6
SHPRH-209ENST00000521977 NAPBQ9H115 298 aa11.32□□□□□ -0.6
SHPRH-209ENST00000521977 ZNF277Q9NRM2 450 aaPredicted RBP11.32□□□□□ -0.6
SHPRH-209ENST00000521977 AATFQ9NY61 560 aaKnown RBP eCLIP11.32□□□□□ -0.6
SHPRH-209ENST00000521977 MKRN1Q9UHC7 482 aaKnown RBP11.32□□□□□ -0.6
SHPRH-209ENST00000521977 BAG3O95817 575 aa11.31□□□□□ -0.6
SHPRH-209ENST00000521977 CPA1P15085 419 aa11.31□□□□□ -0.6
SHPRH-209ENST00000521977 IARSP41252 1262 aaKnown RBP11.31□□□□□ -0.6
SHPRH-209ENST00000521977 AK2P54819 239 aa11.31□□□□□ -0.6
SHPRH-209ENST00000521977 EXOSC10Q01780 885 aaKnown RBP11.31□□□□□ -0.6
SHPRH-209ENST00000521977 HS6ST3Q8IZP7 471 aa11.31□□□□□ -0.6
SHPRH-209ENST00000521977 SDR42E1Q8WUS8 393 aa11.31□□□□□ -0.6
SHPRH-209ENST00000521977 FBXW7Q969H0 707 aa11.31□□□□□ -0.6
SHPRH-209ENST00000521977 MXD3Q9BW11 206 aa11.31□□□□□ -0.6
SHPRH-209ENST00000521977 TAOK3Q9H2K8 898 aa11.31□□□□□ -0.6
SHPRH-209ENST00000521977 ATP8A2Q9NTI2 1148 aa11.31□□□□□ -0.6
SHPRH-209ENST00000521977 PDRG1Q9NUG6 133 aa11.31□□□□□ -0.6
SHPRH-209ENST00000521977 DAXXQ9UER7 740 aaPredicted RBP11.31□□□□□ -0.6
SHPRH-209ENST00000521977 ANAPC4Q9UJX5 808 aa11.31□□□□□ -0.6
SHPRH-209ENST00000521977 BCS1LQ9Y276 419 aa11.31□□□□□ -0.6
SHPRH-209ENST00000521977 VIL1P09327 827 aaKnown RBP11.3□□□□□ -0.6
SHPRH-209ENST00000521977 BTDP43251 543 aa11.3□□□□□ -0.6
SHPRH-209ENST00000521977 TDO2P48775 406 aa11.3□□□□□ -0.6
SHPRH-209ENST00000521977 RHBDL3P58872 404 aa11.3□□□□□ -0.6
SHPRH-209ENST00000521977 HAND2P61296 217 aa11.3□□□□□ -0.6
SHPRH-209ENST00000521977 HDLBPQ00341 1268 aaKnown RBP11.3□□□□□ -0.6
SHPRH-209ENST00000521977 SBK1Q52WX2 424 aa11.3□□□□□ -0.6
SHPRH-209ENST00000521977 HHIPL2Q6UWX4 724 aa11.3□□□□□ -0.6
SHPRH-209ENST00000521977 TBC1D10CQ8IV04 446 aa11.3□□□□□ -0.6
SHPRH-209ENST00000521977 LARGE2Q8N3Y3 721 aa11.3□□□□□ -0.6
SHPRH-209ENST00000521977 FBXL16Q8N461 479 aa11.3□□□□□ -0.6
SHPRH-209ENST00000521977 SH3RF3Q8TEJ3 882 aaPredicted RBP11.3□□□□□ -0.6
SHPRH-209ENST00000521977 STAG1Q8WVM7 1258 aa11.3□□□□□ -0.6
SHPRH-209ENST00000521977 AGXT2Q9BYV1 514 aa11.3□□□□□ -0.6
SHPRH-209ENST00000521977 DCP1AQ9NPI6 582 aaPredicted RBP11.3□□□□□ -0.6
SHPRH-209ENST00000521977 DAGLAQ9Y4D2 1042 aa11.3□□□□□ -0.6
SHPRH-209ENST00000521977 WDR19Q8NEZ3 1342 aa11.3□□□□□ -0.6
SHPRH-209ENST00000521977 CDK5RAP2Q96SN8 1893 aa11.29□□□□□ -0.6
SHPRH-209ENST00000521977 DDX60LQ5H9U9 1706 aaKnown RBP11.29□□□□□ -0.6
SHPRH-209ENST00000521977 LAMB1P07942 1786 aa11.29□□□□□ -0.6
SHPRH-209ENST00000521977 GOLGB1Q14789 3259 aaKnown RBP11.29□□□□□ -0.6
SHPRH-209ENST00000521977 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
SHPRH-209ENST00000521977 CUL4AQ13619 759 aa11.29□□□□□ -0.6
SHPRH-209ENST00000521977 TOB2Q14106 344 aaPredicted RBP11.29□□□□□ -0.6
SHPRH-209ENST00000521977 CTR9Q6PD62 1173 aa11.29□□□□□ -0.6
SHPRH-209ENST00000521977 TMEM92Q6UXU6 159 aa11.29□□□□□ -0.6
SHPRH-209ENST00000521977 DHX32Q7L7V1 743 aaKnown RBP11.29□□□□□ -0.6
SHPRH-209ENST00000521977 NIM1KQ8IY84 436 aa11.29□□□□□ -0.6
SHPRH-209ENST00000521977 MB21D2Q8IYB1 491 aaPredicted RBP11.29□□□□□ -0.6
SHPRH-209ENST00000521977 ZNF710Q8N1W2 664 aa11.29□□□□□ -0.6
SHPRH-209ENST00000521977 TMX3Q96JJ7 454 aa11.29□□□□□ -0.6
SHPRH-209ENST00000521977 GMLQ99445 158 aa11.29□□□□□ -0.6
SHPRH-209ENST00000521977 NOL10Q9BSC4 688 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms