RNA–Protein interactions for RNA: ENST00000521589.5

NPIPB3-205, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-205ENST00000521589 KCNH4Q9UQ05 1017 aa10.8□□□□□ -0.68
NPIPB3-205ENST00000521589 COL2A1P02458 1487 aaPredicted RBP10.8□□□□□ -0.68
NPIPB3-205ENST00000521589 PHF20L1A8MW92 1017 aa10.79□□□□□ -0.68
NPIPB3-205ENST00000521589 LDHCP07864 332 aa10.79□□□□□ -0.68
NPIPB3-205ENST00000521589 GSTO1P78417 241 aa10.79□□□□□ -0.68
NPIPB3-205ENST00000521589 SP3Q02447 781 aa10.79□□□□□ -0.68
NPIPB3-205ENST00000521589 CEP85Q6P2H3 762 aa10.79□□□□□ -0.68
NPIPB3-205ENST00000521589 SH3BP5LQ7L8J4 393 aa10.79□□□□□ -0.68
NPIPB3-205ENST00000521589 OTOP1Q7RTM1 612 aa10.79□□□□□ -0.68
NPIPB3-205ENST00000521589 PANK1Q8TE04 598 aa10.79□□□□□ -0.68
NPIPB3-205ENST00000521589 DBNDD2Q9BQY9 259 aa10.79□□□□□ -0.68
NPIPB3-205ENST00000521589 DDX4Q9NQI0 724 aaKnown RBP10.79□□□□□ -0.68
NPIPB3-205ENST00000521589 BRCA2P51587 3418 aa10.79□□□□□ -0.68
NPIPB3-205ENST00000521589 MKI67P46013 3256 aaKnown RBP10.79□□□□□ -0.68
NPIPB3-205ENST00000521589 BTBD19C9JJ37 291 aa10.78□□□□□ -0.68
NPIPB3-205ENST00000521589 MS4A1P11836 297 aa10.78□□□□□ -0.68
NPIPB3-205ENST00000521589 OS9Q13438 667 aaPredicted RBP10.78□□□□□ -0.68
NPIPB3-205ENST00000521589 TAF1CQ15572 869 aaPredicted RBP10.78□□□□□ -0.68
NPIPB3-205ENST00000521589 CCDC158Q5M9N0 1113 aa10.78□□□□□ -0.68
NPIPB3-205ENST00000521589 TBC1D9Q6ZT07 1266 aa10.78□□□□□ -0.68
NPIPB3-205ENST00000521589 ZFYVE28Q9HCC9 887 aa10.78□□□□□ -0.68
NPIPB3-205ENST00000521589 DBNLQ9UJU6 430 aaKnown RBP10.78□□□□□ -0.68
NPIPB3-205ENST00000521589 TRIM17Q9Y577 477 aa10.78□□□□□ -0.68
NPIPB3-205ENST00000521589 DOCK2Q92608 1830 aa10.78□□□□□ -0.68
NPIPB3-205ENST00000521589 DDTLA6NHG4 134 aaPredicted RBP10.77□□□□□ -0.69
NPIPB3-205ENST00000521589 TBC1D12O60347 775 aa10.77□□□□□ -0.69
NPIPB3-205ENST00000521589 TLR2O60603 784 aa10.77□□□□□ -0.69
NPIPB3-205ENST00000521589 CAP1Q01518 475 aa10.77□□□□□ -0.69
NPIPB3-205ENST00000521589 MOGSQ13724 837 aa10.77□□□□□ -0.69
NPIPB3-205ENST00000521589 TTC39AQ5SRH9 613 aa10.77□□□□□ -0.69
NPIPB3-205ENST00000521589 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.77□□□□□ -0.69
NPIPB3-205ENST00000521589 CD99L2Q8TCZ2 262 aa10.77□□□□□ -0.69
NPIPB3-205ENST00000521589 EAF2Q96CJ1 260 aaPredicted RBP10.77□□□□□ -0.69
NPIPB3-205ENST00000521589 LRP2BPQ9P2M1 347 aa10.77□□□□□ -0.69
NPIPB3-205ENST00000521589 AK9Q5TCS8 1911 aa10.77□□□□□ -0.69
NPIPB3-205ENST00000521589 KIAA0100Q14667 2235 aaKnown RBP10.77□□□□□ -0.69
NPIPB3-205ENST00000521589 MAST2Q6P0Q8 1798 aa10.76□□□□□ -0.69
NPIPB3-205ENST00000521589 CXCL11O14625 94 aa10.76□□□□□ -0.69
NPIPB3-205ENST00000521589 CYP2E1P05181 493 aaPredicted RBP10.76□□□□□ -0.69
NPIPB3-205ENST00000521589 SOX10P56693 466 aa10.76□□□□□ -0.69
NPIPB3-205ENST00000521589 PPP4CP60510 307 aa10.76□□□□□ -0.69
NPIPB3-205ENST00000521589 ANKRD23Q86SG2 305 aa10.76□□□□□ -0.69
NPIPB3-205ENST00000521589 ERC1Q8IUD2 1116 aa10.76□□□□□ -0.69
NPIPB3-205ENST00000521589 ZSCAN29Q8IWY8 852 aaPredicted RBP10.76□□□□□ -0.69
NPIPB3-205ENST00000521589 SCYL3Q8IZE3 742 aa10.76□□□□□ -0.69
NPIPB3-205ENST00000521589 EFCC1Q9HA90 598 aa10.76□□□□□ -0.69
NPIPB3-205ENST00000521589 ZBTB40Q9NUA8 1239 aa10.76□□□□□ -0.69
NPIPB3-205ENST00000521589 RAI14Q9P0K7 980 aa10.76□□□□□ -0.69
NPIPB3-205ENST00000521589 PTPN22Q9Y2R2 807 aa10.76□□□□□ -0.69
NPIPB3-205ENST00000521589 CTNND1O60716 968 aaKnown RBP10.75□□□□□ -0.69
NPIPB3-205ENST00000521589 PTPRAP18433 802 aa10.75□□□□□ -0.69
NPIPB3-205ENST00000521589 PICALMQ13492 652 aa10.75□□□□□ -0.69
NPIPB3-205ENST00000521589 ARHGEF6Q15052 776 aa10.75□□□□□ -0.69
NPIPB3-205ENST00000521589 NAA16Q6N069 864 aaPredicted RBP10.75□□□□□ -0.69
NPIPB3-205ENST00000521589 TMED8Q6PL24 325 aaPredicted RBP10.75□□□□□ -0.69
NPIPB3-205ENST00000521589 ARMC5Q96C12 935 aa10.75□□□□□ -0.69
NPIPB3-205ENST00000521589 OSBPL5Q9H0X9 879 aaPredicted RBP10.75□□□□□ -0.69
NPIPB3-205ENST00000521589 PICK1Q9NRD5 415 aa10.75□□□□□ -0.69
NPIPB3-205ENST00000521589 SNRKQ9NRH2 765 aa10.75□□□□□ -0.69
NPIPB3-205ENST00000521589 TLR7Q9NYK1 1049 aaKnown RBP10.75□□□□□ -0.69
NPIPB3-205ENST00000521589 DDX19BQ9UMR2 479 aa10.75□□□□□ -0.69
NPIPB3-205ENST00000521589 ADGRA2Q96PE1 1338 aa10.75□□□□□ -0.69
NPIPB3-205ENST00000521589 A0A0G2JLL6 359 aaPredicted RBP10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 BAG3O95817 575 aa10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 PLCG2P16885 1265 aa10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 ZAP70P43403 619 aa10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 HSP90AB4PQ58FF6 505 aa10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 C17orf99Q6UX52 265 aa10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 PRRT2Q7Z6L0 340 aaPredicted RBP10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 METTL16Q86W50 562 aaKnown RBP10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 RPAP2Q8IXW5 612 aaPredicted RBP10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 TEX11Q8IYF3 940 aa10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 CCDC8Q9H0W5 538 aaPredicted RBP10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 RCAN3Q9UKA8 241 aa10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 EXOC6BQ9Y2D4 811 aa10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 AFG3L2Q9Y4W6 797 aa10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 ZHX2Q9Y6X8 837 aa10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 DOCK1Q14185 1865 aa10.74□□□□□ -0.69
NPIPB3-205ENST00000521589 PDHXO00330 501 aa10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 GNRH1P01148 92 aa10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 SLURP2P0DP57 97 aa10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 LACTBP83111 547 aaPredicted RBP10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 PDE3AQ14432 1141 aa10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 GPAT2Q6NUI2 795 aa10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 ADGRA1Q86SQ6 560 aa10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 CERS3Q8IU89 383 aa10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 SIRT2Q8IXJ6 389 aa10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 SH3RF3Q8TEJ3 882 aaPredicted RBP10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 NOL10Q9BSC4 688 aaKnown RBP10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 DHX36Q9H2U1 1008 aaKnown RBP10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 CHMP4BQ9H444 224 aaKnown RBP10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 PIH1D3Q9NQM4 214 aaKnown RBP10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 HERC5Q9UII4 1024 aaKnown RBP10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 COG6Q9Y2V7 657 aa10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 SLC45A1Q9Y2W3 748 aa10.73□□□□□ -0.69
NPIPB3-205ENST00000521589 PTPRFP10586 1907 aa10.72□□□□□ -0.69
NPIPB3-205ENST00000521589 HMMRO75330 724 aa10.72□□□□□ -0.69
NPIPB3-205ENST00000521589 BCRP11274 1271 aa10.72□□□□□ -0.69
NPIPB3-205ENST00000521589 FASTKD5Q7L8L6 764 aaKnown RBP10.72□□□□□ -0.69
NPIPB3-205ENST00000521589 AACSQ86V21 672 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms