RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 ABCF2Q9UG63 623 aa22.08■■□□□ 1.13
VEGFA-222ENST00000520948 NDUFB9Q9Y6M9 179 aa22.08■■□□□ 1.13
VEGFA-222ENST00000520948 OTUD7BQ6GQQ9 843 aa22.07■■□□□ 1.12
VEGFA-222ENST00000520948 HHIPL2Q6UWX4 724 aa22.07■■□□□ 1.12
VEGFA-222ENST00000520948 PI4K2BQ8TCG2 481 aa22.07■■□□□ 1.12
VEGFA-222ENST00000520948 ZNF384Q8TF68 577 aa22.07■■□□□ 1.12
VEGFA-222ENST00000520948 BOLA2Q9H3K6 86 aa22.07■■□□□ 1.12
VEGFA-222ENST00000520948 ANTXR1Q9H6X2 564 aa22.07■■□□□ 1.12
VEGFA-222ENST00000520948 PIH1D3Q9NQM4 214 aaKnown RBP22.07■■□□□ 1.12
VEGFA-222ENST00000520948 MAST3O60307 1309 aa22.06■■□□□ 1.12
VEGFA-222ENST00000520948 DOCK2Q92608 1830 aa22.06■■□□□ 1.12
VEGFA-222ENST00000520948 MX1P20591 662 aa22.06■■□□□ 1.12
VEGFA-222ENST00000520948 CACNB3P54284 484 aa22.06■■□□□ 1.12
VEGFA-222ENST00000520948 ERICH6Q7L0X2 663 aa22.06■■□□□ 1.12
VEGFA-222ENST00000520948 FAM163AQ96GL9 167 aaPredicted RBP22.06■■□□□ 1.12
VEGFA-222ENST00000520948 ERO1AQ96HE7 468 aa22.06■■□□□ 1.12
VEGFA-222ENST00000520948 HTTP42858 3142 aa22.06■■□□□ 1.12
VEGFA-222ENST00000520948 PDE1AP54750 535 aa22.05■■□□□ 1.12
VEGFA-222ENST00000520948 MECOMQ03112 1051 aa22.05■■□□□ 1.12
VEGFA-222ENST00000520948 VGLL4Q14135 290 aa22.05■■□□□ 1.12
VEGFA-222ENST00000520948 TSHZ3Q63HK5 1081 aa22.05■■□□□ 1.12
VEGFA-222ENST00000520948 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.05■■□□□ 1.12
VEGFA-222ENST00000520948 CENPQQ7L2Z9 268 aaPredicted RBP22.05■■□□□ 1.12
VEGFA-222ENST00000520948 PLEKHM2Q8IWE5 1019 aa22.05■■□□□ 1.12
VEGFA-222ENST00000520948 NSUN4Q96CB9 384 aaKnown RBP22.05■■□□□ 1.12
VEGFA-222ENST00000520948 GPATCH3Q96I76 525 aa22.05■■□□□ 1.12
VEGFA-222ENST00000520948 TESPA1A2RU30 521 aaPredicted RBP22.04■■□□□ 1.12
VEGFA-222ENST00000520948 TNNI2P48788 182 aa22.04■■□□□ 1.12
VEGFA-222ENST00000520948 CAP1Q01518 475 aa22.04■■□□□ 1.12
VEGFA-222ENST00000520948 TEKT1Q969V4 418 aa22.04■■□□□ 1.12
VEGFA-222ENST00000520948 ZDHHC15Q96MV8 337 aa22.04■■□□□ 1.12
VEGFA-222ENST00000520948 OSBPL3Q9H4L5 887 aa22.04■■□□□ 1.12
VEGFA-222ENST00000520948 PPP4R2Q9NY27 417 aa22.04■■□□□ 1.12
VEGFA-222ENST00000520948 LRP2BPQ9P2M1 347 aa22.04■■□□□ 1.12
VEGFA-222ENST00000520948 MYH2Q9UKX2 1941 aa22.04■■□□□ 1.12
VEGFA-222ENST00000520948 POTEFA5A3E0 1075 aa22.03■■□□□ 1.12
VEGFA-222ENST00000520948 PDE4AP27815 886 aa22.03■■□□□ 1.12
VEGFA-222ENST00000520948 TTF1Q15361 905 aaPredicted RBP22.03■■□□□ 1.12
VEGFA-222ENST00000520948 DIXDC1Q155Q3 683 aa22.03■■□□□ 1.12
VEGFA-222ENST00000520948 APOBEC3HQ6NTF7 200 aaKnown RBP22.03■■□□□ 1.12
VEGFA-222ENST00000520948 BRI3BPQ8WY22 251 aa22.03■■□□□ 1.12
VEGFA-222ENST00000520948 EDC3Q96F86 508 aaKnown RBP22.03■■□□□ 1.12
VEGFA-222ENST00000520948 OTUD5Q96G74 571 aa22.03■■□□□ 1.12
VEGFA-222ENST00000520948 CCDC136Q96JN2 1154 aa22.03■■□□□ 1.12
VEGFA-222ENST00000520948 MS4A4AQ96JQ5 239 aa22.03■■□□□ 1.12
VEGFA-222ENST00000520948 PAG1Q9NWQ8 432 aa22.03■■□□□ 1.12
VEGFA-222ENST00000520948 PTPN22Q9Y2R2 807 aa22.03■■□□□ 1.12
VEGFA-222ENST00000520948 RBBP6Q7Z6E9 1792 aaKnown RBP22.02■■□□□ 1.12
VEGFA-222ENST00000520948 CCL15-CCL14A0A0B4J2E2 113 aa22.02■■□□□ 1.12
VEGFA-222ENST00000520948 GOLIM4O00461 696 aa22.02■■□□□ 1.12
VEGFA-222ENST00000520948 ERC2O15083 957 aa22.02■■□□□ 1.12
VEGFA-222ENST00000520948 GLRX3O76003 335 aaKnown RBP22.02■■□□□ 1.12
VEGFA-222ENST00000520948 MAP3K9P80192 1104 aa22.02■■□□□ 1.12
VEGFA-222ENST00000520948 SP3Q02447 781 aa22.02■■□□□ 1.12
VEGFA-222ENST00000520948 CCL15Q16663 113 aa22.02■■□□□ 1.12
VEGFA-222ENST00000520948 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.02■■□□□ 1.122e-42■□□□□ 11.1
VEGFA-222ENST00000520948 DNAJC2Q99543 621 aaKnown RBP22.02■■□□□ 1.12
VEGFA-222ENST00000520948 EFCC1Q9HA90 598 aa22.02■■□□□ 1.12
VEGFA-222ENST00000520948 RAI14Q9P0K7 980 aa22.02■■□□□ 1.12
VEGFA-222ENST00000520948 DAGLAQ9Y4D2 1042 aa22.02■■□□□ 1.12
VEGFA-222ENST00000520948 CSADQ9Y600 493 aa22.02■■□□□ 1.12
VEGFA-222ENST00000520948 GAKO14976 1311 aa22.02■■□□□ 1.12
VEGFA-222ENST00000520948 MAST2Q6P0Q8 1798 aa22■■□□□ 1.11
VEGFA-222ENST00000520948 TAF1CQ15572 869 aaPredicted RBP22■■□□□ 1.11
VEGFA-222ENST00000520948 DZIP1Q86YF9 867 aaKnown RBP22■■□□□ 1.11
VEGFA-222ENST00000520948 SLF2Q8IX21 1173 aa22■■□□□ 1.11
VEGFA-222ENST00000520948 CENPFP49454 3210 aa21.99■■□□□ 1.11
VEGFA-222ENST00000520948 ZSWIM8A7E2V4 1837 aa21.99■■□□□ 1.11
VEGFA-222ENST00000520948 LDHCP07864 332 aa21.99■■□□□ 1.11
VEGFA-222ENST00000520948 GTF2A2P52657 109 aa21.99■■□□□ 1.11
VEGFA-222ENST00000520948 GSTO1P78417 241 aa21.99■■□□□ 1.11
VEGFA-222ENST00000520948 TMED8Q6PL24 325 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-222ENST00000520948 FAM43AQ8N2R8 423 aa21.99■■□□□ 1.11
VEGFA-222ENST00000520948 TMOD2Q9NZR1 351 aa21.99■■□□□ 1.11
VEGFA-222ENST00000520948 GPR75-ASB3A0A0A6YYF3 556 aa21.98■■□□□ 1.11
VEGFA-222ENST00000520948 IDH1O75874 414 aaKnown RBP21.98■■□□□ 1.11
VEGFA-222ENST00000520948 MAP3K12Q12852 859 aa21.98■■□□□ 1.11
VEGFA-222ENST00000520948 SNCAIPQ9Y6H5 919 aa21.98■■□□□ 1.11
VEGFA-222ENST00000520948 MROH7-TTC4A0A0A0MT08 1334 aa21.98■■□□□ 1.11
VEGFA-222ENST00000520948 NAA16Q6N069 864 aaPredicted RBP21.97■■□□□ 1.11
VEGFA-222ENST00000520948 ZKSCAN4Q969J2 545 aaPredicted RBP21.97■■□□□ 1.11
VEGFA-222ENST00000520948 WRNIP1Q96S55 665 aa21.97■■□□□ 1.11
VEGFA-222ENST00000520948 ZFYVE28Q9HCC9 887 aa21.97■■□□□ 1.11
VEGFA-222ENST00000520948 SPDYE5A6NIY4 337 aa21.96■■□□□ 1.11
VEGFA-222ENST00000520948 CDC42EP5Q6NZY7 148 aa21.96■■□□□ 1.11
VEGFA-222ENST00000520948 ADGRA1Q86SQ6 560 aa21.96■■□□□ 1.11
VEGFA-222ENST00000520948 KBTBD3Q8NAB2 608 aa21.96■■□□□ 1.11
VEGFA-222ENST00000520948 ARMC5Q96C12 935 aa21.96■■□□□ 1.11
VEGFA-222ENST00000520948 TCRBV5S4A2TA0A5A2 114 aa21.95■■□□□ 1.1
VEGFA-222ENST00000520948 MAP4K4O95819 1239 aaPredicted RBP21.95■■□□□ 1.1
VEGFA-222ENST00000520948 PPP4CP60510 307 aa21.95■■□□□ 1.1
VEGFA-222ENST00000520948 MAGEB6Q8N7X4 407 aa21.95■■□□□ 1.1
VEGFA-222ENST00000520948 MYH7P12883 1935 aa21.94■■□□□ 1.1
VEGFA-222ENST00000520948 PDE6AP16499 860 aa21.94■■□□□ 1.1
VEGFA-222ENST00000520948 EN2P19622 333 aaPredicted RBP21.94■■□□□ 1.1
VEGFA-222ENST00000520948 CYP7A1P22680 504 aa21.94■■□□□ 1.1
VEGFA-222ENST00000520948 ADD2P35612 726 aa21.94■■□□□ 1.1
VEGFA-222ENST00000520948 BTDP43251 543 aa21.94■■□□□ 1.1
VEGFA-222ENST00000520948 RHBDL3P58872 404 aa21.94■■□□□ 1.1
VEGFA-222ENST00000520948 SLC9C2Q5TAH2 1124 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms