RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 CSADQ9Y600 493 aa8.46□□□□□ -1.06
PTPN12-214ENST00000520947 HCLS1P14317 486 aaPredicted RBP8.45□□□□□ -1.06
PTPN12-214ENST00000520947 TTLL4Q14679 1199 aa8.45□□□□□ -1.06
PTPN12-214ENST00000520947 LRRC14Q15048 493 aa8.45□□□□□ -1.06
PTPN12-214ENST00000520947 CCDC85BQ15834 202 aaPredicted RBP8.45□□□□□ -1.06
PTPN12-214ENST00000520947 SV2BQ7L1I2 683 aa8.45□□□□□ -1.06
PTPN12-214ENST00000520947 GIMAP7Q8NHV1 300 aa8.45□□□□□ -1.06
PTPN12-214ENST00000520947 OSBPL1AQ9BXW6 950 aa8.45□□□□□ -1.06
PTPN12-214ENST00000520947 MED26O95402 600 aa8.44□□□□□ -1.06
PTPN12-214ENST00000520947 ERCC3P19447 782 aa8.44□□□□□ -1.06
PTPN12-214ENST00000520947 MAP3K11Q16584 847 aa8.44□□□□□ -1.06
PTPN12-214ENST00000520947 ZC3H12AQ5D1E8 599 aaKnown RBP8.44□□□□□ -1.06
PTPN12-214ENST00000520947 ZAR1Q86SH2 424 aa8.44□□□□□ -1.06
PTPN12-214ENST00000520947 PCMTD2Q9NV79 361 aa8.44□□□□□ -1.06
PTPN12-214ENST00000520947 PCDHA4Q9UN74 947 aa8.44□□□□□ -1.06
PTPN12-214ENST00000520947 FAM170BA6NMN3 283 aa8.43□□□□□ -1.06
PTPN12-214ENST00000520947 DCDC2CA8MYV0 355 aa8.43□□□□□ -1.06
PTPN12-214ENST00000520947 COBLO75128 1261 aa8.43□□□□□ -1.06
PTPN12-214ENST00000520947 TRIM37O94972 964 aa8.43□□□□□ -1.06
PTPN12-214ENST00000520947 TTBK2Q6IQ55 1244 aa8.43□□□□□ -1.06
PTPN12-214ENST00000520947 TMC4Q7Z404 712 aa8.43□□□□□ -1.06
PTPN12-214ENST00000520947 SMYD4Q8IYR2 804 aaPredicted RBP8.43□□□□□ -1.06
PTPN12-214ENST00000520947 CYP8B1Q9UNU6 501 aa8.43□□□□□ -1.06
PTPN12-214ENST00000520947 GRIK1P39086 918 aa8.42□□□□□ -1.06
PTPN12-214ENST00000520947 CD97P48960 835 aa8.42□□□□□ -1.06
PTPN12-214ENST00000520947 C12orf40Q86WS4 652 aa8.42□□□□□ -1.06
PTPN12-214ENST00000520947 GATA6Q92908 595 aa8.42□□□□□ -1.06
PTPN12-214ENST00000520947 MRS2Q9HD23 443 aa8.42□□□□□ -1.06
PTPN12-214ENST00000520947 SSU72Q9NP77 194 aaKnown RBP8.42□□□□□ -1.06
PTPN12-214ENST00000520947 PICK1Q9NRD5 415 aa8.42□□□□□ -1.06
PTPN12-214ENST00000520947 C1GALT1Q9NS00 363 aa8.42□□□□□ -1.06
PTPN12-214ENST00000520947 CACNA2D2Q9NY47 1150 aa8.42□□□□□ -1.06
PTPN12-214ENST00000520947 PIM2Q9P1W9 311 aa8.42□□□□□ -1.06
PTPN12-214ENST00000520947 LEMD3Q9Y2U8 911 aa8.42□□□□□ -1.06
PTPN12-214ENST00000520947 NEFMP07197 916 aa8.41□□□□□ -1.06
PTPN12-214ENST00000520947 HOXA10P31260 410 aaPredicted RBP8.41□□□□□ -1.06
PTPN12-214ENST00000520947 PTPN11Q06124 597 aaPredicted RBP8.41□□□□□ -1.06
PTPN12-214ENST00000520947 CDK5R2Q13319 367 aa8.41□□□□□ -1.06
PTPN12-214ENST00000520947 PPM1JQ5JR12 505 aa8.41□□□□□ -1.06
PTPN12-214ENST00000520947 SEZ6L2Q6UXD5 910 aa8.41□□□□□ -1.06
PTPN12-214ENST00000520947 NBPF11Q86T75 865 aa8.41□□□□□ -1.06
PTPN12-214ENST00000520947 BCL2L13Q9BXK5 485 aa8.41□□□□□ -1.06
PTPN12-214ENST00000520947 VTI1BQ9UEU0 232 aa8.41□□□□□ -1.06
PTPN12-214ENST00000520947 SORBS3O60504 671 aa8.4□□□□□ -1.06
PTPN12-214ENST00000520947 CTSHP09668 335 aa8.4□□□□□ -1.06
PTPN12-214ENST00000520947 ERVK-24P63145 666 aa8.4□□□□□ -1.06
PTPN12-214ENST00000520947 ZNF765Q7L2R6 523 aa8.4□□□□□ -1.06
PTPN12-214ENST00000520947 RNF214Q8ND24 703 aa8.4□□□□□ -1.06
PTPN12-214ENST00000520947 ISL2Q96A47 359 aa8.4□□□□□ -1.06
PTPN12-214ENST00000520947 LMNB1P20700 586 aa8.39□□□□□ -1.07
PTPN12-214ENST00000520947 TAF1CQ15572 869 aaPredicted RBP8.39□□□□□ -1.07
PTPN12-214ENST00000520947 INTS5Q6P9B9 1019 aaKnown RBP8.39□□□□□ -1.07
PTPN12-214ENST00000520947 RGS22Q8NE09 1264 aa8.39□□□□□ -1.07
PTPN12-214ENST00000520947 GIPC2Q8TF65 315 aa8.39□□□□□ -1.07
PTPN12-214ENST00000520947 ELMO3Q96BJ8 720 aa8.39□□□□□ -1.07
PTPN12-214ENST00000520947 METTL22Q9BUU2 404 aaPredicted RBP8.39□□□□□ -1.07
PTPN12-214ENST00000520947 PCOLCE2Q9UKZ9 415 aa8.39□□□□□ -1.07
PTPN12-214ENST00000520947 PCDHB5Q9Y5E4 795 aa8.39□□□□□ -1.07
PTPN12-214ENST00000520947 LIG3P49916 1009 aa8.38□□□□□ -1.07
PTPN12-214ENST00000520947 SEPT6Q14141 434 aa8.38□□□□□ -1.07
PTPN12-214ENST00000520947 INPP5AQ14642 412 aa8.38□□□□□ -1.07
PTPN12-214ENST00000520947 DUSP27Q5VZP5 1158 aa8.38□□□□□ -1.07
PTPN12-214ENST00000520947 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.38□□□□□ -1.07
PTPN12-214ENST00000520947 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.38□□□□□ -1.07
PTPN12-214ENST00000520947 GAL3ST3Q96A11 431 aa8.38□□□□□ -1.07
PTPN12-214ENST00000520947 KRTAP9-2Q9BYQ4 174 aa8.38□□□□□ -1.07
PTPN12-214ENST00000520947 LRRC4CQ9HCJ2 640 aa8.38□□□□□ -1.07
PTPN12-214ENST00000520947 PRAMEF27A3QJZ7 478 aa8.37□□□□□ -1.07
PTPN12-214ENST00000520947 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.37□□□□□ -1.07
PTPN12-214ENST00000520947 F6X3S4 739 aa8.37□□□□□ -1.07
PTPN12-214ENST00000520947 CYP26A1O43174 497 aa8.37□□□□□ -1.07
PTPN12-214ENST00000520947 FAM87AP0C7U9 286 aa8.37□□□□□ -1.07
PTPN12-214ENST00000520947 LRFN4Q6PJG9 635 aa8.37□□□□□ -1.07
PTPN12-214ENST00000520947 CRELD1Q96HD1 420 aa8.37□□□□□ -1.07
PTPN12-214ENST00000520947 KIAA1324LA8MWY0 1029 aaPredicted RBP8.36□□□□□ -1.07
PTPN12-214ENST00000520947 FOSL1P15407 271 aa8.36□□□□□ -1.07
PTPN12-214ENST00000520947 CDK8P49336 464 aa8.36□□□□□ -1.07
PTPN12-214ENST00000520947 CYP27A1Q02318 531 aa8.36□□□□□ -1.07
PTPN12-214ENST00000520947 SCARA3Q6AZY7 606 aa8.36□□□□□ -1.07
PTPN12-214ENST00000520947 OGFOD3Q6PK18 319 aa8.36□□□□□ -1.07
PTPN12-214ENST00000520947 UBE3DQ7Z6J8 389 aa8.36□□□□□ -1.07
PTPN12-214ENST00000520947 PLPPR2Q96GM1 343 aa8.36□□□□□ -1.07
PTPN12-214ENST00000520947 TLR6Q9Y2C9 796 aa8.36□□□□□ -1.07
PTPN12-214ENST00000520947 USP31Q70CQ4 1352 aa8.35□□□□□ -1.07
PTPN12-214ENST00000520947 ST13P50502 369 aaKnown RBP8.35□□□□□ -1.07
PTPN12-214ENST00000520947 RPS26P62854 115 aaKnown RBP8.35□□□□□ -1.07
PTPN12-214ENST00000520947 CPSF6Q16630 551 aaKnown RBP eCLIP8.35□□□□□ -1.07
PTPN12-214ENST00000520947 ZNF326Q5BKZ1 582 aaKnown RBP8.35□□□□□ -1.07
PTPN12-214ENST00000520947 ZBTB37Q5TC79 503 aa8.35□□□□□ -1.07
PTPN12-214ENST00000520947 AGMOQ6ZNB7 445 aa8.35□□□□□ -1.07
PTPN12-214ENST00000520947 KRTAP9-6A0A140TA67 174 aa8.34□□□□□ -1.07
PTPN12-214ENST00000520947 LEFTY1O75610 366 aa8.34□□□□□ -1.07
PTPN12-214ENST00000520947 TFE3P19532 575 aaPredicted RBP8.34□□□□□ -1.07
PTPN12-214ENST00000520947 SPINK2P20155 84 aa8.34□□□□□ -1.07
PTPN12-214ENST00000520947 NTF4P34130 210 aa8.34□□□□□ -1.07
PTPN12-214ENST00000520947 RING1Q06587 406 aa8.34□□□□□ -1.07
PTPN12-214ENST00000520947 WIPI1Q5MNZ9 446 aaPredicted RBP8.34□□□□□ -1.07
PTPN12-214ENST00000520947 CDC37L1Q7L3B6 337 aa8.34□□□□□ -1.07
PTPN12-214ENST00000520947 HDXQ7Z353 690 aa8.34□□□□□ -1.07
PTPN12-214ENST00000520947 NOC4LQ9BVI4 516 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms