RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 EZH1Q92800 747 aaPredicted RBP7□□□□□ -1.29
SQLE-204ENST00000520493 TBC1D32Q96NH3 1257 aa7□□□□□ -1.29
SQLE-204ENST00000520493 WDR18Q9BV38 432 aa7□□□□□ -1.29
SQLE-204ENST00000520493 ZC3H12CQ9C0D7 883 aaKnown RBP7□□□□□ -1.29
SQLE-204ENST00000520493 CEP44Q9C0F1 390 aa7□□□□□ -1.29
SQLE-204ENST00000520493 KRT82Q9NSB4 513 aa7□□□□□ -1.29
SQLE-204ENST00000520493 SAMM50Q9Y512 469 aa7□□□□□ -1.29
SQLE-204ENST00000520493 CARMIL2Q6F5E8 1435 aa7□□□□□ -1.29
SQLE-204ENST00000520493 FGD1P98174 961 aa6.99□□□□□ -1.29
SQLE-204ENST00000520493 SULF2Q8IWU5 870 aa6.99□□□□□ -1.29
SQLE-204ENST00000520493 EMILIN2Q9BXX0 1053 aa6.99□□□□□ -1.29
SQLE-204ENST00000520493 KRTAP9-3Q9BYQ3 159 aa6.99□□□□□ -1.29
SQLE-204ENST00000520493 ATXN3LQ9H3M9 355 aa6.99□□□□□ -1.29
SQLE-204ENST00000520493 PIDD1Q9HB75 910 aa6.99□□□□□ -1.29
SQLE-204ENST00000520493 PPM1HQ9ULR3 514 aa6.99□□□□□ -1.29
SQLE-204ENST00000520493 NFICP08651 508 aa6.98□□□□□ -1.29
SQLE-204ENST00000520493 KRTAP19-4Q3LI73 84 aa6.98□□□□□ -1.29
SQLE-204ENST00000520493 NPM2Q86SE8 214 aaKnown RBP6.98□□□□□ -1.29
SQLE-204ENST00000520493 KCNB2Q92953 911 aa6.98□□□□□ -1.29
SQLE-204ENST00000520493 KRTAP9-8Q9BYQ0 159 aa6.98□□□□□ -1.29
SQLE-204ENST00000520493 GZF1Q9H116 711 aaPredicted RBP6.98□□□□□ -1.29
SQLE-204ENST00000520493 CCDC86Q9H6F5 360 aaKnown RBP6.98□□□□□ -1.29
SQLE-204ENST00000520493 PAK6Q9NQU5 681 aaPredicted RBP6.98□□□□□ -1.29
SQLE-204ENST00000520493 FAM105AQ9NUU6 356 aa6.98□□□□□ -1.29
SQLE-204ENST00000520493 BSDC1Q9NW68 430 aaPredicted RBP6.98□□□□□ -1.29
SQLE-204ENST00000520493 BIN1O00499 593 aa6.97□□□□□ -1.29
SQLE-204ENST00000520493 LIG1P18858 919 aa6.97□□□□□ -1.29
SQLE-204ENST00000520493 NME2P22392 152 aa6.97□□□□□ -1.29
SQLE-204ENST00000520493 CYP27A1Q02318 531 aa6.97□□□□□ -1.29
SQLE-204ENST00000520493 ID3Q02535 119 aa6.97□□□□□ -1.29
SQLE-204ENST00000520493 DUSP27Q5VZP5 1158 aa6.97□□□□□ -1.29
SQLE-204ENST00000520493 ZAR1Q86SH2 424 aa6.97□□□□□ -1.29
SQLE-204ENST00000520493 FRMD6Q96NE9 622 aa6.97□□□□□ -1.29
SQLE-204ENST00000520493 SLC38A3Q99624 504 aa6.97□□□□□ -1.29
SQLE-204ENST00000520493 SEMA6CQ9H3T2 930 aa6.97□□□□□ -1.29
SQLE-204ENST00000520493 ACSS3Q9H6R3 686 aa6.97□□□□□ -1.29
SQLE-204ENST00000520493 PRKAG2Q9UGJ0 569 aa6.97□□□□□ -1.29
SQLE-204ENST00000520493 DAGLAQ9Y4D2 1042 aa6.97□□□□□ -1.29
SQLE-204ENST00000520493 CYP26A1O43174 497 aa6.96□□□□□ -1.3
SQLE-204ENST00000520493 LDHBP07195 334 aaKnown RBP6.96□□□□□ -1.3
SQLE-204ENST00000520493 ARNTP27540 789 aa6.96□□□□□ -1.3
SQLE-204ENST00000520493 KIF4BQ2VIQ3 1234 aa6.96□□□□□ -1.3
SQLE-204ENST00000520493 SND1Q7KZF4 910 aaKnown RBP eCLIP6.96□□□□□ -1.32e-11■■■□□ 15.3
SQLE-204ENST00000520493 SHISA5Q8N114 240 aa6.96□□□□□ -1.3
SQLE-204ENST00000520493 ACSBG1Q96GR2 724 aa6.96□□□□□ -1.3
SQLE-204ENST00000520493 GSX1Q9H4S2 264 aaPredicted RBP6.96□□□□□ -1.3
SQLE-204ENST00000520493 CBX8Q9HC52 389 aa6.96□□□□□ -1.3
SQLE-204ENST00000520493 FAM8A1Q9UBU6 413 aa6.96□□□□□ -1.3
SQLE-204ENST00000520493 PPP1R9AQ9ULJ8 1098 aa6.96□□□□□ -1.3
SQLE-204ENST00000520493 TMPRSS2O15393 492 aa6.95□□□□□ -1.3
SQLE-204ENST00000520493 P4HBP07237 508 aaKnown RBP6.95□□□□□ -1.3
SQLE-204ENST00000520493 TPTE2Q6XPS3 522 aa6.95□□□□□ -1.3
SQLE-204ENST00000520493 C3orf58Q8NDZ4 430 aa6.95□□□□□ -1.3
SQLE-204ENST00000520493 C12orf49Q9H741 205 aa6.95□□□□□ -1.3
SQLE-204ENST00000520493 CRIM1Q9NZV1 1036 aa6.95□□□□□ -1.3
SQLE-204ENST00000520493 WWC3Q9ULE0 1092 aa6.95□□□□□ -1.3
SQLE-204ENST00000520493 ZNF862O60290 1169 aa6.94□□□□□ -1.3
SQLE-204ENST00000520493 MAP1SQ66K74 1059 aaPredicted RBP6.94□□□□□ -1.3
SQLE-204ENST00000520493 PDZD3Q86UT5 571 aa6.94□□□□□ -1.3
SQLE-204ENST00000520493 RGS22Q8NE09 1264 aa6.94□□□□□ -1.3
SQLE-204ENST00000520493 WDR89Q96FK6 387 aaPredicted RBP6.94□□□□□ -1.3
SQLE-204ENST00000520493 NECAB3Q96P71 396 aaPredicted RBP6.94□□□□□ -1.3
SQLE-204ENST00000520493 SETDB2Q96T68 719 aa6.94□□□□□ -1.3
SQLE-204ENST00000520493 OSBPL7Q9BZF2 842 aa6.94□□□□□ -1.3
SQLE-204ENST00000520493 RNGTTO60942 597 aaKnown RBP6.93□□□□□ -1.3
SQLE-204ENST00000520493 MFAP1P55081 439 aaKnown RBP6.93□□□□□ -1.3
SQLE-204ENST00000520493 LRRC14Q15048 493 aa6.93□□□□□ -1.3
SQLE-204ENST00000520493 SMYD4Q8IYR2 804 aaPredicted RBP6.93□□□□□ -1.3
SQLE-204ENST00000520493 FANCD2OSQ96PS1 177 aa6.93□□□□□ -1.3
SQLE-204ENST00000520493 PRPF40AO75400 957 aaKnown RBP6.92□□□□□ -1.3
SQLE-204ENST00000520493 USP17L7P0C7H9 530 aa6.92□□□□□ -1.3
SQLE-204ENST00000520493 EIF4BP23588 611 aaKnown RBP6.92□□□□□ -1.3
SQLE-204ENST00000520493 GNA15P30679 374 aa6.92□□□□□ -1.3
SQLE-204ENST00000520493 ADMP35318 185 aa6.92□□□□□ -1.3
SQLE-204ENST00000520493 CYP27C1Q4G0S4 372 aa6.92□□□□□ -1.3
SQLE-204ENST00000520493 EAPPQ56P03 285 aaPredicted RBP6.92□□□□□ -1.3
SQLE-204ENST00000520493 ANKRD24Q8TF21 1146 aa6.92□□□□□ -1.3
SQLE-204ENST00000520493 LGR6Q9HBX8 967 aa6.92□□□□□ -1.3
SQLE-204ENST00000520493 SSU72Q9NP77 194 aaKnown RBP6.92□□□□□ -1.3
SQLE-204ENST00000520493 PICK1Q9NRD5 415 aa6.92□□□□□ -1.3
SQLE-204ENST00000520493 ANKRD33BA6NCL7 494 aa6.91□□□□□ -1.3
SQLE-204ENST00000520493 FAM170BA6NMN3 283 aa6.91□□□□□ -1.3
SQLE-204ENST00000520493 ENC1O14682 589 aa6.91□□□□□ -1.3
SQLE-204ENST00000520493 FBXO24O75426 580 aa6.91□□□□□ -1.3
SQLE-204ENST00000520493 TTLL4Q14679 1199 aa6.91□□□□□ -1.3
SQLE-204ENST00000520493 PLCL1Q15111 1095 aa6.91□□□□□ -1.3
SQLE-204ENST00000520493 SCARA3Q6AZY7 606 aa6.91□□□□□ -1.3
SQLE-204ENST00000520493 LLGL2Q6P1M3 1020 aa6.91□□□□□ -1.3
SQLE-204ENST00000520493 STK35Q8TDR2 534 aa6.91□□□□□ -1.3
SQLE-204ENST00000520493 FAM168AQ92567 244 aa6.91□□□□□ -1.3
SQLE-204ENST00000520493 LRRC4CQ9HCJ2 640 aa6.91□□□□□ -1.3
SQLE-204ENST00000520493 TTF2Q9UNY4 1162 aaKnown RBP6.91□□□□□ -1.3
SQLE-204ENST00000520493 TRIM37O94972 964 aa6.9□□□□□ -1.3
SQLE-204ENST00000520493 HCLS1P14317 486 aaPredicted RBP6.9□□□□□ -1.3
SQLE-204ENST00000520493 ERVK-24P63145 666 aa6.9□□□□□ -1.3
SQLE-204ENST00000520493 ZNF252P-AS1Q0IIN9 211 aa6.9□□□□□ -1.3
SQLE-204ENST00000520493 ZNF792Q3KQV3 632 aa6.9□□□□□ -1.3
SQLE-204ENST00000520493 ZNF765Q7L2R6 523 aa6.9□□□□□ -1.3
SQLE-204ENST00000520493 GPBAR1Q8TDU6 330 aa6.9□□□□□ -1.3
SQLE-204ENST00000520493 GATA6Q92908 595 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms