RNA–Protein interactions for RNA: ENST00000520172.5

RUNX1T1-223, Transcript of RUNX1 translocation partner 1, human

TSL 4

Gene RUNX1T1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-223	ENST00000520172	RLF	Q13129	1914 aa		10.11	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	FAM110C	Q1W6H9	321 aa		10.1	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	TRIM60	Q495X7	471 aa		10.1	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	MIGA2	Q7L4E1	593 aa		10.1	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	FASTKD5	Q7L8L6	764 aa	Known RBP	10.1	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	DZIP1L	Q8IYY4	767 aa	Known RBP	10.1	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	HERVK_113	Q902F9	699 aa		10.1	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	CHD6	Q8TD26	2715 aa		10.1	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	GRXCR1	A8MXD5	290 aa		10.09	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	CXCL11	O14625	94 aa		10.09	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	ZKSCAN1	P17029	563 aa	Predicted RBP	10.09	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	CACNB3	P54284	484 aa		10.09	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	PLBD2	Q8NHP8	589 aa		10.09	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	ANKS1A	Q92625	1134 aa		10.09	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	CFAP47	Q6ZTR5	3102 aa		10.09	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.09	□□□□□ -0.79
RUNX1T1-223	ENST00000520172	RIF1	Q5UIP0	2472 aa	Known RBP	10.08	□□□□□ -0.8
RUNX1T1-223	ENST00000520172		A0A0G2JLL6	359 aa	Predicted RBP	10.08	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	DNM1L	O00429	736 aa		10.08	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	PDE8A	O60658	829 aa		10.08	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	KCNJ4	P48050	445 aa		10.08	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	FKBP1A	P62942	108 aa	Known RBP	10.08	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	FPGS	Q05932	587 aa		10.08	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	PRRT2	Q7Z6L0	340 aa	Predicted RBP	10.08	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	SERPINA10	Q9UK55	444 aa		10.08	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	TTF2	Q9UNY4	1162 aa	Known RBP	10.08	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	COG5	Q9UP83	839 aa		10.08	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	SLC45A1	Q9Y2W3	748 aa		10.08	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	BRWD1	Q9NSI6	2320 aa		10.08	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	PTPRF	P10586	1907 aa		10.07	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	ALAD	P13716	330 aa		10.07	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.07	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	SLC39A5	Q6ZMH5	540 aa		10.07	□□□□□ -0.8
RUNX1T1-223	ENST00000520172		A0A0G2JMZ2	1700 aa		10.07	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	ANKRD11	Q6UB99	2663 aa	Predicted RBP	10.07	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	NCOR2	Q9Y618	2525 aa		10.06	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	MYO15A	Q9UKN7	3530 aa		10.06	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	DLG5	Q8TDM6	1919 aa		10.06	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	CACNA1H	O95180	2353 aa		10.06	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	RAG1	P15918	1043 aa		10.06	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	TRMT44	Q8IYL2	757 aa	Known RBP	10.06	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	JARID2	Q92833	1246 aa	Predicted RBP	10.06	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	NKX2-4	Q9H2Z4	354 aa		10.06	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	MSRA	Q9UJ68	235 aa		10.06	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	DAGLA	Q9Y4D2	1042 aa		10.06	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	FAM186A	A6NE01	2351 aa		10.06	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	TRIO	O75962	3097 aa		10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	ACACB	O00763	2458 aa		10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	GBF1	Q92538	1859 aa		10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	XRCC5	P13010	732 aa	Known RBP	10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	SSTR3	P32745	418 aa	Predicted RBP	10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	CRK	P46108	304 aa		10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	PTPN5	P54829	565 aa		10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	TRIM28	Q13263	835 aa	Known RBP	10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	KCTD2	Q14681	263 aa		10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	RAB30	Q15771	203 aa		10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	NOL9	Q5SY16	702 aa	Known RBP	10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	GJD3	Q8N144	294 aa		10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	PRSS33	Q8NF86	280 aa		10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	LPAR1	Q92633	364 aa		10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	NUDT12	Q9BQG2	462 aa		10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	SLC28A3	Q9HAS3	691 aa		10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	TMOD2	Q9NZR1	351 aa		10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	PNMA3	Q9UL41	463 aa		10.05	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	RGS20	O76081	388 aa		10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	CTSW	P56202	376 aa		10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	CCL14	Q16627	93 aa		10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	MFSD14B	Q5SR56	506 aa		10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	GJC2	Q5T442	439 aa	Predicted RBP	10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	HFE2	Q6ZVN8	426 aa		10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	ZNF804A	Q7Z570	1209 aa		10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	SOCS4	Q8WXH5	440 aa		10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	HLA-C	Q95604	372 aa		10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	ANKRD2	Q9GZV1	360 aa		10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	DDX20	Q9UHI6	824 aa	Known RBP	10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	TSPYL4	Q9UJ04	414 aa		10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	AGTPBP1	Q9UPW5	1226 aa		10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	TACC3	Q9Y6A5	838 aa		10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	ZHX2	Q9Y6X8	837 aa		10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.04	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	MYH3	P11055	1940 aa		10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	KBTBD13	C9JR72	458 aa		10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	SNAP23	O00161	211 aa		10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	MYCN	P04198	464 aa	Predicted RBP	10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	PCCA	P05165	728 aa	Predicted RBP	10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	CLTB	P09497	229 aa		10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	IL1R1	P14778	569 aa		10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	CNGA1	P29973	690 aa		10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	ID4	P47928	161 aa		10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	GCLC	P48506	637 aa	Predicted RBP	10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	TLE2	Q04725	743 aa		10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	SNX17	Q15036	470 aa		10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	FAM83A	Q86UY5	434 aa		10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	GREM2	Q9H772	168 aa		10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	CHPF2	Q9P2E5	772 aa		10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	ZNF112	Q9UJU3	913 aa		10.03	□□□□□ -0.8
RUNX1T1-223	ENST00000520172	DCX	O43602	365 aa		10.02	□□□□□ -0.81
RUNX1T1-223	ENST00000520172	GTPBP6	O43824	516 aa	Predicted RBP	10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms