RNA–Protein interactions for RNA: ENST00000520163.1

AC109479.3-201, humanhuman

TSL 3 BASIC

Gene AC109479.3, Length 360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109479.3-201ENST00000520163 CAPN2P17655 700 aa16.27■□□□□ 0.2
AC109479.3-201ENST00000520163 PTPRAP18433 802 aa16.27■□□□□ 0.2
AC109479.3-201ENST00000520163 GADL1Q6ZQY3 521 aa16.27■□□□□ 0.2
AC109479.3-201ENST00000520163 FASTKD5Q7L8L6 764 aaKnown RBP16.27■□□□□ 0.2
AC109479.3-201ENST00000520163 NECAB2Q7Z6G3 386 aa16.27■□□□□ 0.2
AC109479.3-201ENST00000520163 C7orf61Q8IZ16 206 aa16.27■□□□□ 0.2
AC109479.3-201ENST00000520163 SCYL3Q8IZE3 742 aa16.27■□□□□ 0.2
AC109479.3-201ENST00000520163 SPINK5Q9NQ38 1064 aaPredicted RBP16.27■□□□□ 0.2
AC109479.3-201ENST00000520163 STXBP5LQ9Y2K9 1186 aa16.27■□□□□ 0.2
AC109479.3-201ENST00000520163 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
AC109479.3-201ENST00000520163 PRDX5P30044 214 aa16.26■□□□□ 0.19
AC109479.3-201ENST00000520163 NCBP3Q53F19 620 aaKnown RBP16.26■□□□□ 0.19
AC109479.3-201ENST00000520163 WDR66Q8TBY9 1149 aa16.26■□□□□ 0.19
AC109479.3-201ENST00000520163 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.26■□□□□ 0.19
AC109479.3-201ENST00000520163 USP40Q9NVE5 1235 aa16.26■□□□□ 0.19
AC109479.3-201ENST00000520163 TAOK2Q9UL54 1235 aa16.26■□□□□ 0.19
AC109479.3-201ENST00000520163 SLC45A1Q9Y2W3 748 aa16.26■□□□□ 0.19
AC109479.3-201ENST00000520163 IFIT1P09914 478 aaKnown RBP16.25■□□□□ 0.19
AC109479.3-201ENST00000520163 PUM3Q15397 648 aaKnown RBP16.25■□□□□ 0.19
AC109479.3-201ENST00000520163 LRIT3Q3SXY7 679 aa16.25■□□□□ 0.19
AC109479.3-201ENST00000520163 SH3BP5LQ7L8J4 393 aa16.25■□□□□ 0.19
AC109479.3-201ENST00000520163 MTMR10Q9NXD2 777 aa16.25■□□□□ 0.19
AC109479.3-201ENST00000520163 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.25■□□□□ 0.19
AC109479.3-201ENST00000520163 VCANP13611 3396 aa16.25■□□□□ 0.19
AC109479.3-201ENST00000520163 SYN1P17600 705 aa16.24■□□□□ 0.19
AC109479.3-201ENST00000520163 MAGEA10P43363 369 aaPredicted RBP16.24■□□□□ 0.19
AC109479.3-201ENST00000520163 CCDC84Q86UT8 332 aaPredicted RBP16.24■□□□□ 0.19
AC109479.3-201ENST00000520163 WDR63Q8IWG1 891 aa16.24■□□□□ 0.19
AC109479.3-201ENST00000520163 ANKRD13CQ8N6S4 541 aa16.24■□□□□ 0.19
AC109479.3-201ENST00000520163 SMCR8Q8TEV9 937 aaPredicted RBP16.24■□□□□ 0.19
AC109479.3-201ENST00000520163 PICK1Q9NRD5 415 aa16.24■□□□□ 0.19
AC109479.3-201ENST00000520163 SALL2Q9Y467 1007 aaPredicted RBP16.24■□□□□ 0.19
AC109479.3-201ENST00000520163 RGS3P49796 1198 aa16.23■□□□□ 0.19
AC109479.3-201ENST00000520163 MAP3K10Q02779 954 aa16.23■□□□□ 0.19
AC109479.3-201ENST00000520163 TRIM32Q13049 653 aa16.23■□□□□ 0.19
AC109479.3-201ENST00000520163 COA7Q96BR5 231 aa16.23■□□□□ 0.19
AC109479.3-201ENST00000520163 COL25A1Q9BXS0 654 aaPredicted RBP16.23■□□□□ 0.19
AC109479.3-201ENST00000520163 TRIM75PA6NK02 468 aa16.22■□□□□ 0.19
AC109479.3-201ENST00000520163 TREML2Q5T2D2 321 aa16.22■□□□□ 0.19
AC109479.3-201ENST00000520163 TDHQ8IZJ6 230 aa16.22■□□□□ 0.19
AC109479.3-201ENST00000520163 ANKLE1Q8NAG6 615 aa16.22■□□□□ 0.19
AC109479.3-201ENST00000520163 IDI2Q9BXS1 227 aa16.22■□□□□ 0.19
AC109479.3-201ENST00000520163 ALPK3Q96L96 1907 aa16.21■□□□□ 0.19
AC109479.3-201ENST00000520163 CACNA1FO60840 1977 aa16.21■□□□□ 0.19
AC109479.3-201ENST00000520163 DDTLA6NHG4 134 aaPredicted RBP16.21■□□□□ 0.19
AC109479.3-201ENST00000520163 RFX5P48382 616 aaPredicted RBP16.21■□□□□ 0.19
AC109479.3-201ENST00000520163 FAM110CQ1W6H9 321 aa16.21■□□□□ 0.19
AC109479.3-201ENST00000520163 LPIN2Q92539 896 aa16.21■□□□□ 0.19
AC109479.3-201ENST00000520163 NBPF3Q9H094 633 aa16.21■□□□□ 0.19
AC109479.3-201ENST00000520163 GJD2Q9UKL4 321 aa16.21■□□□□ 0.19
AC109479.3-201ENST00000520163 AGTPBP1Q9UPW5 1226 aa16.21■□□□□ 0.19
AC109479.3-201ENST00000520163 RFX7Q2KHR2 1363 aa16.21■□□□□ 0.19
AC109479.3-201ENST00000520163 MGAMO43451 1857 aa16.2■□□□□ 0.18
AC109479.3-201ENST00000520163 ENTPD3O75355 529 aa16.2■□□□□ 0.18
AC109479.3-201ENST00000520163 HMGCRP04035 888 aa16.2■□□□□ 0.18
AC109479.3-201ENST00000520163 LDHBP07195 334 aaKnown RBP16.2■□□□□ 0.18
AC109479.3-201ENST00000520163 SLC5A1P13866 664 aa16.2■□□□□ 0.18
AC109479.3-201ENST00000520163 DDX4Q9NQI0 724 aaKnown RBP16.2■□□□□ 0.18
AC109479.3-201ENST00000520163 EYA2O00167 538 aa16.19■□□□□ 0.18
AC109479.3-201ENST00000520163 CTNND1O60716 968 aaKnown RBP16.19■□□□□ 0.18
AC109479.3-201ENST00000520163 ATG9AQ7Z3C6 839 aa16.19■□□□□ 0.18
AC109479.3-201ENST00000520163 C11orf49Q9H6J7 331 aa16.19■□□□□ 0.18
AC109479.3-201ENST00000520163 OGDHLQ9ULD0 1010 aa16.19■□□□□ 0.18
AC109479.3-201ENST00000520163 LRRFIP2Q9Y608 721 aaKnown RBP16.19■□□□□ 0.18
AC109479.3-201ENST00000520163 GAKO14976 1311 aa16.19■□□□□ 0.18
AC109479.3-201ENST00000520163 PFASO15067 1338 aa16.19■□□□□ 0.18
AC109479.3-201ENST00000520163 RPTORQ8N122 1335 aa16.19■□□□□ 0.18
AC109479.3-201ENST00000520163 SALL1Q9NSC2 1324 aa16.19■□□□□ 0.18
AC109479.3-201ENST00000520163 ZSCAN29Q8IWY8 852 aaPredicted RBP16.18■□□□□ 0.18
AC109479.3-201ENST00000520163 UBE2OQ9C0C9 1292 aaKnown RBP16.18■□□□□ 0.18
AC109479.3-201ENST00000520163 USP44Q9H0E7 712 aa16.18■□□□□ 0.18
AC109479.3-201ENST00000520163 HMX1Q9NP08 348 aaPredicted RBP16.18■□□□□ 0.18
AC109479.3-201ENST00000520163 DOCK3Q8IZD9 2030 aa16.18■□□□□ 0.18
AC109479.3-201ENST00000520163 TRIB2Q92519 343 aa16.17■□□□□ 0.18
AC109479.3-201ENST00000520163 LAMA2P24043 3122 aaKnown RBP16.17■□□□□ 0.18
AC109479.3-201ENST00000520163 PHKA1P46020 1223 aa16.16■□□□□ 0.18
AC109479.3-201ENST00000520163 MAP3K21Q5TCX8 1036 aa16.16■□□□□ 0.18
AC109479.3-201ENST00000520163 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.16■□□□□ 0.18
AC109479.3-201ENST00000520163 GUCD1Q96NT3 240 aa16.16■□□□□ 0.18
AC109479.3-201ENST00000520163 PNMA3Q9UL41 463 aa16.16■□□□□ 0.18
AC109479.3-201ENST00000520163 FAM196BA6NMK8 535 aa16.15■□□□□ 0.18
AC109479.3-201ENST00000520163 SPP2Q13103 211 aa16.15■□□□□ 0.18
AC109479.3-201ENST00000520163 PICALMQ13492 652 aa16.15■□□□□ 0.18
AC109479.3-201ENST00000520163 ATP2B3Q16720 1220 aa16.15■□□□□ 0.18
AC109479.3-201ENST00000520163 PROCA1Q8NCQ7 364 aaPredicted RBP16.15■□□□□ 0.18
AC109479.3-201ENST00000520163 SPTBN5Q9NRC6 3674 aaKnown RBP16.15■□□□□ 0.18
AC109479.3-201ENST00000520163 EYSQ5T1H1 3165 aa16.15■□□□□ 0.18
AC109479.3-201ENST00000520163 POTEB2H3BUK9 544 aa16.14■□□□□ 0.17
AC109479.3-201ENST00000520163 PEX10O60683 326 aa16.14■□□□□ 0.17
AC109479.3-201ENST00000520163 COL6A1P12109 1028 aa16.14■□□□□ 0.17
AC109479.3-201ENST00000520163 GCLCP48506 637 aaPredicted RBP16.14■□□□□ 0.17
AC109479.3-201ENST00000520163 RRP1BQ14684 758 aaKnown RBP16.14■□□□□ 0.17
AC109479.3-201ENST00000520163 MRPL50Q8N5N7 158 aaKnown RBP16.14■□□□□ 0.17
AC109479.3-201ENST00000520163 ASCC2Q9H1I8 757 aaPredicted RBP16.14■□□□□ 0.17
AC109479.3-201ENST00000520163 GNL3LQ9NVN8 582 aaKnown RBP16.14■□□□□ 0.17
AC109479.3-201ENST00000520163 DENND2AQ9ULE3 1009 aa16.14■□□□□ 0.17
AC109479.3-201ENST00000520163 AK9Q5TCS8 1911 aa16.13■□□□□ 0.17
AC109479.3-201ENST00000520163 SEMA3EO15041 775 aa16.13■□□□□ 0.17
AC109479.3-201ENST00000520163 TBC1D12O60347 775 aa16.13■□□□□ 0.17
AC109479.3-201ENST00000520163 PRKAR2AP13861 404 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms