RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 RIOK1Q9BRS2 568 aaKnown RBP9.82□□□□□ -0.84
HMGB4-203ENST00000519684 LRRC4BQ9NT99 713 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 LEMD3Q9Y2U8 911 aa9.82□□□□□ -0.84
HMGB4-203ENST00000519684 ME1P48163 572 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 DYNLL1P63167 89 aaKnown RBP9.81□□□□□ -0.84
HMGB4-203ENST00000519684 MECOMQ03112 1051 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 SSRP1Q08945 709 aaKnown RBP9.81□□□□□ -0.84
HMGB4-203ENST00000519684 CAMK4Q16566 473 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 OTUD7BQ6GQQ9 843 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 STK11IPQ8N1F8 1099 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 NKX2-3Q8TAU0 364 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 WASF1Q92558 559 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 FUCA2Q9BTY2 467 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 CRNKL1Q9BZJ0 848 aaKnown RBP9.81□□□□□ -0.84
HMGB4-203ENST00000519684 SENP2Q9HC62 589 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 LAMB1P07942 1786 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 DUOX1Q9NRD9 1551 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 CCDC196A0A1B0GTZ2 297 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 STK38Q15208 465 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 SF3A1Q15459 793 aaKnown RBP9.81□□□□□ -0.84
HMGB4-203ENST00000519684 KRT27Q7Z3Y8 459 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 DZIP1Q86YF9 867 aaKnown RBP9.81□□□□□ -0.84
HMGB4-203ENST00000519684 CCAR1Q8IX12 1150 aaKnown RBP9.81□□□□□ -0.84
HMGB4-203ENST00000519684 NSUN4Q96CB9 384 aaKnown RBP9.81□□□□□ -0.84
HMGB4-203ENST00000519684 MYL10Q9BUA6 226 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 RTEL1Q9NZ71 1219 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 CCDC39Q9UFE4 941 aa9.81□□□□□ -0.84
HMGB4-203ENST00000519684 KIAA1551Q9HCM1 1747 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 XDHP47989 1333 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 STK36Q9NRP7 1315 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 BRWD3Q6RI45 1802 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 NID2Q14112 1375 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 NR1I2O75469 434 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 SLC3A2P08195 630 aaKnown RBP9.8□□□□□ -0.84
HMGB4-203ENST00000519684 PCP11498 1178 aaKnown RBP9.8□□□□□ -0.84
HMGB4-203ENST00000519684 CDC27P30260 824 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 RTN1Q16799 776 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 PRR5LQ6MZQ0 368 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 SASS6Q6UVJ0 657 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 ZNF804AQ7Z570 1209 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 ILDR1Q86SU0 546 aaPredicted RBP9.8□□□□□ -0.84
HMGB4-203ENST00000519684 TRIM22Q8IYM9 498 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 KCNG4Q8TDN1 519 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 PHKBQ93100 1093 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 ZKSCAN3Q9BRR0 538 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 FTOQ9C0B1 505 aaKnown RBP eCLIP9.8□□□□□ -0.84
HMGB4-203ENST00000519684 TACC3Q9Y6A5 838 aa9.8□□□□□ -0.84
HMGB4-203ENST00000519684 BAZ2AQ9UIF9 1905 aaKnown RBP9.8□□□□□ -0.84
HMGB4-203ENST00000519684 ZBTB22O15209 634 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 CTAGE5O15320 804 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 IGSF3O75054 1194 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 YEATS4O95619 227 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 POLR3DP05423 398 aaPredicted RBP9.79□□□□□ -0.84
HMGB4-203ENST00000519684 PTMAP06454 111 aaKnown RBP9.79□□□□□ -0.84
HMGB4-203ENST00000519684 MSNP26038 577 aaKnown RBP9.79□□□□□ -0.84
HMGB4-203ENST00000519684 RCAN1P53805 252 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 KIF23Q02241 960 aaPredicted RBP9.79□□□□□ -0.84
HMGB4-203ENST00000519684 TYRO3Q06418 890 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 MYSM1Q5VVJ2 828 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 WDR66Q8TBY9 1149 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 RBM17Q96I25 401 aaKnown RBP9.79□□□□□ -0.84
HMGB4-203ENST00000519684 SLC26A6Q9BXS9 759 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 KINO60870 393 aaKnown RBP9.79□□□□□ -0.84
HMGB4-203ENST00000519684 FMNL1O95466 1100 aaPredicted RBP9.79□□□□□ -0.84
HMGB4-203ENST00000519684 SERPINB2P05120 415 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 GYS1P13807 737 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 KRT40Q6A162 431 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 ZSCAN30Q86W11 494 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 CKAP2LQ8IYA6 745 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 ATP8A2Q9NTI2 1148 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 POLR3EQ9NVU0 708 aa9.79□□□□□ -0.84
HMGB4-203ENST00000519684 AATFQ9NY61 560 aaKnown RBP eCLIP9.79□□□□□ -0.84
HMGB4-203ENST00000519684 TNKSO95271 1327 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 TRIM37O94972 964 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 LDHBP07195 334 aaKnown RBP9.78□□□□□ -0.84
HMGB4-203ENST00000519684 IFNAR1P17181 557 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 PRDX5P30044 214 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 CLCN1P35523 988 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 GSTO1P78417 241 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 NTRK3Q16288 839 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 RBM43Q6ZSC3 357 aaKnown RBP9.78□□□□□ -0.84
HMGB4-203ENST00000519684 IQCA1Q86XH1 822 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 ZNF654Q8IZM8 581 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 FSIP1Q8NA03 581 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 NUP133Q8WUM0 1156 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 NOL10Q9BSC4 688 aaKnown RBP9.78□□□□□ -0.84
HMGB4-203ENST00000519684 IRS2Q9Y4H2 1338 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 RANBP6O60518 1105 aaKnown RBP9.78□□□□□ -0.84
HMGB4-203ENST00000519684 FAM160A1Q05DH4 1040 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 PPP2R5BQ15173 497 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 SAFBQ15424 915 aaKnown RBP eCLIP9.78□□□□□ -0.84
HMGB4-203ENST00000519684 CTR9Q6PD62 1173 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 TXNRD3Q86VQ6 643 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 LINC00301Q8NCQ3 95 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 FAM200AQ8TCP9 573 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 ZNF384Q8TF68 577 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 MRPS27Q92552 414 aaKnown RBP9.78□□□□□ -0.84
HMGB4-203ENST00000519684 ZSCAN10Q96SZ4 725 aaPredicted RBP9.78□□□□□ -0.84
HMGB4-203ENST00000519684 GJB4Q9NTQ9 266 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 FAM217BQ9NTX9 383 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms