RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 CFAP100Q494V2 611 aa13.06□□□□□ -0.32
NUDCD1-203ENST00000519607 ISM2Q6H9L7 571 aa13.06□□□□□ -0.32
NUDCD1-203ENST00000519607 SHC4Q6S5L8 630 aa13.06□□□□□ -0.32
NUDCD1-203ENST00000519607 HOMER1Q86YM7 354 aa13.06□□□□□ -0.32
NUDCD1-203ENST00000519607 ELOA2Q8IYF1 753 aaPredicted RBP13.06□□□□□ -0.32
NUDCD1-203ENST00000519607 PPP1R13BQ96KQ4 1090 aa13.06□□□□□ -0.32
NUDCD1-203ENST00000519607 AIFM3Q96NN9 605 aa13.06□□□□□ -0.32
NUDCD1-203ENST00000519607 MAP3K14Q99558 947 aa13.06□□□□□ -0.32
NUDCD1-203ENST00000519607 NOL10Q9BSC4 688 aaKnown RBP13.06□□□□□ -0.32
NUDCD1-203ENST00000519607 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.06□□□□□ -0.32
NUDCD1-203ENST00000519607 NACAP1Q9BZK3 213 aa13.06□□□□□ -0.32
NUDCD1-203ENST00000519607 LY9Q9HBG7 655 aa13.06□□□□□ -0.32
NUDCD1-203ENST00000519607 TOGARAM1Q9Y4F4 1720 aa13.06□□□□□ -0.32
NUDCD1-203ENST00000519607 SOS2Q07890 1332 aaPredicted RBP13.06□□□□□ -0.32
NUDCD1-203ENST00000519607 CCDC196A0A1B0GTZ2 297 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 ERICH2A1L162 156 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 GNAT2P19087 354 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 PHKA1P46020 1223 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 NTRK3Q16288 839 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 MFSD6Q6ZSS7 791 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 IFNL3Q8IZI9 196 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 SYNE4Q8N205 404 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 TMTC2Q8N394 836 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 KRI1Q8N9T8 703 aaKnown RBP13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 SLC26A6Q9BXS9 759 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 DACH1Q9UI36 760 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 DDX41Q9UJV9 622 aaKnown RBP13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 TAOK2Q9UL54 1235 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 KCNH3Q9ULD8 1083 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 STRCQ7RTU9 1775 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 FMNL1O95466 1100 aaPredicted RBP13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 PNOCQ13519 176 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 KRBA2Q6ZNG9 492 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 SPATA5Q8NB90 893 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 AK7Q96M32 723 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 NUP98P52948 1817 aa13.05□□□□□ -0.32
NUDCD1-203ENST00000519607 ECM29Q5VYK3 1845 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 TCRBV5S4A2TA0A5A2 114 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 ERVV-1B6SEH8 477 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 TOP1P11387 765 aaKnown RBP13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 NAA30Q147X3 362 aaPredicted RBP13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 AKNAD1Q5T1N1 836 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 NOSTRINQ8IVI9 506 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 CCDC34Q96HJ3 373 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 ZSWIM5Q9P217 1185 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 WWC3Q9ULE0 1092 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 UBN2Q6ZU65 1347 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 ITGB4P16144 1822 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 IFNAR1P17181 557 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 RILPL1Q5EBL4 403 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 MAGEB6Q8N7X4 407 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 MTA3Q9BTC8 594 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 L2HGDHQ9H9P8 463 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 DENND2AQ9ULE3 1009 aa13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 MORC2Q9Y6X9 1032 aaPredicted RBP13.04□□□□□ -0.32
NUDCD1-203ENST00000519607 ZSCAN12O43309 604 aa13.03□□□□□ -0.32
NUDCD1-203ENST00000519607 SYT10Q6XYQ8 523 aa13.03□□□□□ -0.32
NUDCD1-203ENST00000519607 CLIC6Q96NY7 704 aa13.03□□□□□ -0.32
NUDCD1-203ENST00000519607 MPHOSPH8Q99549 860 aa13.03□□□□□ -0.32
NUDCD1-203ENST00000519607 CEP131Q9UPN4 1083 aa13.03□□□□□ -0.32
NUDCD1-203ENST00000519607 RANBP6O60518 1105 aaKnown RBP13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 KIF20AO95235 890 aa13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 MBD4O95243 580 aa13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 MMP1P03956 469 aa13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 CYP19A1P11511 503 aaPredicted RBP13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 ATP1A3P13637 1013 aa13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 RTN1Q16799 776 aa13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 LONRF3Q496Y0 759 aa13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 KANK3Q6NY19 840 aa13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 FCHSD1Q86WN1 690 aa13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 FOXP1Q9H334 677 aaPredicted RBP13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 RNF41Q9H4P4 317 aaPredicted RBP13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 TOMM22Q9NS69 142 aa13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 SLAIN2Q9P270 581 aa13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 PCDHA5Q9Y5H7 936 aa13.02□□□□□ -0.32
NUDCD1-203ENST00000519607 ARAP2Q8WZ64 1704 aa13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 TDO2P48775 406 aa13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 ETF1P62495 437 aaKnown RBP13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 CTDSPL2Q05D32 466 aa13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 GABPB1Q06547 395 aaPredicted RBP13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 WTAPQ15007 396 aa13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 ELF2Q15723 593 aa13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 METTL16Q86W50 562 aaKnown RBP13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 VSTM4Q8IW00 320 aa13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 KRT222Q8N1A0 295 aa13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 MYL10Q9BUA6 226 aa13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 SRRTQ9BXP5 876 aaKnown RBP13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 SENP2Q9HC62 589 aa13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 FAM217BQ9NTX9 383 aaPredicted RBP13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 PHLPP2Q6ZVD8 1323 aa13.02□□□□□ -0.33
NUDCD1-203ENST00000519607 XIRP1Q702N8 1843 aaKnown RBP13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 DOCK2Q92608 1830 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 DEXIO95424 95 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 CDK11BP21127 795 aaKnown RBP13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 FGFR2P21802 821 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 RCAN1P53805 252 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 DZIP3Q86Y13 1208 aaKnown RBP13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 DIS3L2Q8IYB7 885 aaKnown RBP13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 MLKLQ8NB16 471 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 LRP6O75581 1613 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms