RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 MYO1BO43795 1136 aa9.45□□□□□ -0.9
CLK4-203ENST00000519583 ITGBL1O95965 494 aaPredicted RBP9.45□□□□□ -0.9
CLK4-203ENST00000519583 CDC37L1Q7L3B6 337 aa9.45□□□□□ -0.9
CLK4-203ENST00000519583 SULF1Q8IWU6 871 aa9.45□□□□□ -0.9
CLK4-203ENST00000519583 MTMR14Q8NCE2 650 aa9.45□□□□□ -0.9
CLK4-203ENST00000519583 LRP2BPQ9P2M1 347 aa9.45□□□□□ -0.9
CLK4-203ENST00000519583 ADM5C9JUS6 153 aa9.45□□□□□ -0.9
CLK4-203ENST00000519583 BAG4O95429 457 aaKnown RBP9.45□□□□□ -0.9
CLK4-203ENST00000519583 HDLBPQ00341 1268 aaKnown RBP9.45□□□□□ -0.9
CLK4-203ENST00000519583 FMR1Q06787 632 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLK4-203ENST00000519583 LRRFIP1Q32MZ4 808 aaKnown RBP9.45□□□□□ -0.9
CLK4-203ENST00000519583 TSGA10IPQ3SY00 556 aa9.45□□□□□ -0.9
CLK4-203ENST00000519583 FOXD4L5Q5VV16 416 aaPredicted RBP9.45□□□□□ -0.9
CLK4-203ENST00000519583 FOXD4L4Q8WXT5 416 aaPredicted RBP9.45□□□□□ -0.9
CLK4-203ENST00000519583 ZBED3Q96IU2 234 aaPredicted RBP9.45□□□□□ -0.9
CLK4-203ENST00000519583 VEZTQ9HBM0 779 aa9.45□□□□□ -0.9
CLK4-203ENST00000519583 ZFYP08048 801 aaPredicted RBP9.44□□□□□ -0.9
CLK4-203ENST00000519583 CYP21A2P08686 494 aa9.44□□□□□ -0.9
CLK4-203ENST00000519583 RPS6KB1P23443 525 aa9.44□□□□□ -0.9
CLK4-203ENST00000519583 DLK2Q6UY11 383 aa9.44□□□□□ -0.9
CLK4-203ENST00000519583 DSCC1Q9BVC3 393 aa9.44□□□□□ -0.9
CLK4-203ENST00000519583 PIH1D3Q9NQM4 214 aaKnown RBP9.44□□□□□ -0.9
CLK4-203ENST00000519583 TRAK2O60296 914 aa9.44□□□□□ -0.9
CLK4-203ENST00000519583 HSPD1P10809 573 aaKnown RBP9.44□□□□□ -0.9
CLK4-203ENST00000519583 TDRD3Q9H7E2 651 aaKnown RBP9.44□□□□□ -0.9
CLK4-203ENST00000519583 KRT32Q14532 448 aa9.44□□□□□ -0.9
CLK4-203ENST00000519583 HHIPL2Q6UWX4 724 aa9.44□□□□□ -0.9
CLK4-203ENST00000519583 CLEC17AQ6ZS10 378 aa9.44□□□□□ -0.9
CLK4-203ENST00000519583 APPBP2Q92624 585 aa9.44□□□□□ -0.9
CLK4-203ENST00000519583 ZDHHC15Q96MV8 337 aa9.44□□□□□ -0.9
CLK4-203ENST00000519583 MRIQ9BWK5 157 aa9.44□□□□□ -0.9
CLK4-203ENST00000519583 ZNF408Q9H9D4 720 aa9.44□□□□□ -0.9
CLK4-203ENST00000519583 DAGLAQ9Y4D2 1042 aa9.44□□□□□ -0.9
CLK4-203ENST00000519583 POLR2AP24928 1970 aaKnown RBP9.44□□□□□ -0.9
CLK4-203ENST00000519583 AKAP11Q9UKA4 1901 aa9.43□□□□□ -0.9
CLK4-203ENST00000519583 HSPA6P17066 643 aa9.43□□□□□ -0.9
CLK4-203ENST00000519583 MECOMQ03112 1051 aa9.43□□□□□ -0.9
CLK4-203ENST00000519583 PASKQ96RG2 1323 aa9.43□□□□□ -0.9
CLK4-203ENST00000519583 PITPNM2Q9BZ72 1349 aa9.43□□□□□ -0.9
CLK4-203ENST00000519583 IDH1O75874 414 aaKnown RBP9.43□□□□□ -0.9
CLK4-203ENST00000519583 ME3Q16798 604 aa9.43□□□□□ -0.9
CLK4-203ENST00000519583 APOBEC3FQ8IUX4 373 aaKnown RBP9.43□□□□□ -0.9
CLK4-203ENST00000519583 CCDC83Q8IWF9 413 aa9.43□□□□□ -0.9
CLK4-203ENST00000519583 SLF2Q8IX21 1173 aa9.43□□□□□ -0.9
CLK4-203ENST00000519583 NEK1Q96PY6 1258 aa9.43□□□□□ -0.9
CLK4-203ENST00000519583 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.43□□□□□ -0.9
CLK4-203ENST00000519583 PUS7LQ9H0K6 701 aaKnown RBP9.43□□□□□ -0.9
CLK4-203ENST00000519583 ZNF70Q9UC06 446 aaPredicted RBP9.43□□□□□ -0.9
CLK4-203ENST00000519583 TPCN1Q9ULQ1 816 aa9.43□□□□□ -0.9
CLK4-203ENST00000519583 DTNBO60941 627 aa9.43□□□□□ -0.9
CLK4-203ENST00000519583 APLP1P51693 650 aa9.43□□□□□ -0.9
CLK4-203ENST00000519583 TTF1Q15361 905 aaPredicted RBP9.43□□□□□ -0.9
CLK4-203ENST00000519583 APOBEC3HQ6NTF7 200 aaKnown RBP9.43□□□□□ -0.9
CLK4-203ENST00000519583 STOX1Q6ZVD7 989 aa9.43□□□□□ -0.9
CLK4-203ENST00000519583 NSUN4Q96CB9 384 aaKnown RBP9.43□□□□□ -0.9
CLK4-203ENST00000519583 ZSCAN31Q96LW9 406 aaPredicted RBP9.43□□□□□ -0.9
CLK4-203ENST00000519583 SH2B1Q9NRF2 756 aaPredicted RBP9.43□□□□□ -0.9
CLK4-203ENST00000519583 BRD1O95696 1058 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 ADD2P35612 726 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 GSTO1P78417 241 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 ST3GAL1Q11201 340 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 SPDYE2Q495Y8 402 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 SLC9C2Q5TAH2 1124 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 PRAMEF18Q5VWM3 479 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 NECAB1Q8N987 351 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 CHAMP1Q96JM3 812 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 GOLGA6L22H0YM25 854 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 FOXP2O15409 715 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 CELF2O95319 508 aaKnown RBP9.42□□□□□ -0.9
CLK4-203ENST00000519583 LDHCP07864 332 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 CACNB3P54284 484 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 TOB2Q14106 344 aaPredicted RBP9.42□□□□□ -0.9
CLK4-203ENST00000519583 MCTP1Q6DN14 999 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 NAA16Q6N069 864 aaPredicted RBP9.42□□□□□ -0.9
CLK4-203ENST00000519583 ZNF384Q8TF68 577 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 GZF1Q9H116 711 aaPredicted RBP9.42□□□□□ -0.9
CLK4-203ENST00000519583 TMOD2Q9NZR1 351 aa9.42□□□□□ -0.9
CLK4-203ENST00000519583 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.42□□□□□ -0.9
CLK4-203ENST00000519583 TCP10L2B9ZVM9 353 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 HTRA3P83110 453 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 CDCA5Q96FF9 252 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 SMC3Q9UQE7 1217 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 MROH7-TTC4A0A0A0MT08 1334 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 GPAA1O43292 621 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 PDE6AP16499 860 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 BTDP43251 543 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 MAP3K12Q12852 859 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 ANKRD1Q15327 319 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 ZSCAN25Q6NSZ9 544 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 DEFB129Q9H1M3 183 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 USP40Q9NVE5 1235 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 GAKO14976 1311 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 TNFAIP1Q13829 316 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 CDC42EP5Q6NZY7 148 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 ALDH8A1Q9H2A2 487 aaPredicted RBP9.41□□□□□ -0.9
CLK4-203ENST00000519583 MYH2Q9UKX2 1941 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 ZNF532Q9HCE3 1301 aa9.41□□□□□ -0.9
CLK4-203ENST00000519583 TMEM88BA6NKF7 163 aa9.4□□□□□ -0.9
CLK4-203ENST00000519583 MAGEB6Q8N7X4 407 aa9.4□□□□□ -0.9
CLK4-203ENST00000519583 FAM163AQ96GL9 167 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms