RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	OTUD5	Q96G74	571 aa		29.49	■■■□□ 2.31
CNOT7-204	ENST00000518885	TTF1	Q15361	905 aa	Predicted RBP	29.48	■■■□□ 2.31
CNOT7-204	ENST00000518885	ZNF384	Q8TF68	577 aa		29.48	■■■□□ 2.31
CNOT7-204	ENST00000518885	TBC1D8	O95759	1140 aa		29.47	■■■□□ 2.31
CNOT7-204	ENST00000518885	RHBDL3	P58872	404 aa		29.47	■■■□□ 2.31
CNOT7-204	ENST00000518885	MAP3K12	Q12852	859 aa		29.47	■■■□□ 2.31
CNOT7-204	ENST00000518885	TEX11	Q8IYF3	940 aa		29.47	■■■□□ 2.31
CNOT7-204	ENST00000518885	ZKSCAN4	Q969J2	545 aa	Predicted RBP	29.47	■■■□□ 2.31
CNOT7-204	ENST00000518885	ZNF112	Q9UJU3	913 aa		29.47	■■■□□ 2.31
CNOT7-204	ENST00000518885	SNCAIP	Q9Y6H5	919 aa		29.47	■■■□□ 2.31
CNOT7-204	ENST00000518885	LAMB1	P07942	1786 aa		29.47	■■■□□ 2.31
CNOT7-204	ENST00000518885	AK9	Q5TCS8	1911 aa		29.46	■■■□□ 2.31
CNOT7-204	ENST00000518885	TESPA1	A2RU30	521 aa	Predicted RBP	29.46	■■■□□ 2.31
CNOT7-204	ENST00000518885	GJA5	P36382	358 aa		29.46	■■■□□ 2.31
CNOT7-204	ENST00000518885	IDH1	O75874	414 aa	Known RBP	29.45	■■■□□ 2.31
CNOT7-204	ENST00000518885	RRP1	P56182	461 aa	Known RBP	29.45	■■■□□ 2.31
CNOT7-204	ENST00000518885	PPAT	Q06203	517 aa		29.45	■■■□□ 2.31
CNOT7-204	ENST00000518885	PPIL2	Q13356	520 aa		29.45	■■■□□ 2.31
CNOT7-204	ENST00000518885	DGKZ	Q13574	1117 aa		29.45	■■■□□ 2.31
CNOT7-204	ENST00000518885	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	29.45	■■■□□ 2.31
CNOT7-204	ENST00000518885	LRRCC1	Q9C099	1032 aa		29.45	■■■□□ 2.31
CNOT7-204	ENST00000518885	COL2A1	P02458	1487 aa	Predicted RBP	29.44	■■■□□ 2.3
CNOT7-204	ENST00000518885	CETP	P11597	493 aa		29.44	■■■□□ 2.3
CNOT7-204	ENST00000518885	SNAPC2	Q13487	334 aa		29.44	■■■□□ 2.3
CNOT7-204	ENST00000518885	ZFPM1	Q8IX07	1006 aa		29.44	■■■□□ 2.3
CNOT7-204	ENST00000518885	ATRNL1	Q5VV63	1379 aa		29.43	■■■□□ 2.3
CNOT7-204	ENST00000518885	GPR25	O00155	361 aa		29.43	■■■□□ 2.3
CNOT7-204	ENST00000518885	CAPN15	O75808	1086 aa		29.43	■■■□□ 2.3
CNOT7-204	ENST00000518885	PPP4C	P60510	307 aa		29.43	■■■□□ 2.3
CNOT7-204	ENST00000518885	NOL9	Q5SY16	702 aa	Known RBP	29.43	■■■□□ 2.3
CNOT7-204	ENST00000518885	DDX4	Q9NQI0	724 aa	Known RBP	29.43	■■■□□ 2.3
CNOT7-204	ENST00000518885	PIH1D3	Q9NQM4	214 aa	Known RBP	29.43	■■■□□ 2.3
CNOT7-204	ENST00000518885	AATF	Q9NY61	560 aa	Known RBP eCLIP	29.43	■■■□□ 2.3
CNOT7-204	ENST00000518885	DOCK2	Q92608	1830 aa		29.43	■■■□□ 2.3
CNOT7-204	ENST00000518885	CCL15-CCL14	A0A0B4J2E2	113 aa		29.42	■■■□□ 2.3
CNOT7-204	ENST00000518885	IGF2BP3	O00425	579 aa	Known RBP eCLIP	29.42	■■■□□ 2.3
CNOT7-204	ENST00000518885	CCL15	Q16663	113 aa		29.42	■■■□□ 2.3
CNOT7-204	ENST00000518885	ABHD8	Q96I13	439 aa		29.42	■■■□□ 2.3
CNOT7-204	ENST00000518885	DHX36	Q9H2U1	1008 aa	Known RBP	29.42	■■■□□ 2.3
CNOT7-204	ENST00000518885	PICK1	Q9NRD5	415 aa		29.42	■■■□□ 2.3
CNOT7-204	ENST00000518885	CASP8AP2	Q9UKL3	1982 aa		29.41	■■■□□ 2.3
CNOT7-204	ENST00000518885	CYP7A1	P22680	504 aa		29.41	■■■□□ 2.3
CNOT7-204	ENST00000518885	INPP5B	P32019	993 aa		29.41	■■■□□ 2.3
CNOT7-204	ENST00000518885	CTU1	Q7Z7A3	348 aa	Known RBP	29.41	■■■□□ 2.3
CNOT7-204	ENST00000518885	ZNF296	Q8WUU4	475 aa	Predicted RBP	29.41	■■■□□ 2.3
CNOT7-204	ENST00000518885	CNKSR2	Q8WXI2	1034 aa		29.41	■■■□□ 2.3
CNOT7-204	ENST00000518885	MS4A4A	Q96JQ5	239 aa		29.41	■■■□□ 2.3
CNOT7-204	ENST00000518885	OSBPL5	Q9H0X9	879 aa	Predicted RBP	29.41	■■■□□ 2.3
CNOT7-204	ENST00000518885	BCL11A	Q9H165	835 aa		29.41	■■■□□ 2.3
CNOT7-204	ENST00000518885	DDTL	A6NHG4	134 aa	Predicted RBP	29.4	■■■□□ 2.3
CNOT7-204	ENST00000518885	TBC1D12	O60347	775 aa		29.4	■■■□□ 2.3
CNOT7-204	ENST00000518885	FKTN	O75072	461 aa		29.4	■■■□□ 2.3
CNOT7-204	ENST00000518885	MAP3K10	Q02779	954 aa		29.4	■■■□□ 2.3
CNOT7-204	ENST00000518885	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	29.4	■■■□□ 2.3
CNOT7-204	ENST00000518885	MCOLN1	Q9GZU1	580 aa		29.4	■■■□□ 2.3
CNOT7-204	ENST00000518885	ZCCHC17	Q9NP64	241 aa	Known RBP	29.4	■■■□□ 2.3
CNOT7-204	ENST00000518885	PKN2	Q16513	984 aa	Known RBP	29.39	■■■□□ 2.3
CNOT7-204	ENST00000518885	SH3BP5L	Q7L8J4	393 aa		29.39	■■■□□ 2.3
CNOT7-204	ENST00000518885	IRF6	O14896	467 aa		29.38	■■■□□ 2.29
CNOT7-204	ENST00000518885	CTNND1	O60716	968 aa	Known RBP	29.38	■■■□□ 2.29
CNOT7-204	ENST00000518885	SCYL3	Q8IZE3	742 aa		29.38	■■■□□ 2.29
CNOT7-204	ENST00000518885	MAGEB6	Q8N7X4	407 aa		29.38	■■■□□ 2.29
CNOT7-204	ENST00000518885	BRI3BP	Q8WY22	251 aa		29.37	■■■□□ 2.29
CNOT7-204	ENST00000518885	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	29.37	■■■□□ 2.29
CNOT7-204	ENST00000518885	ZFYVE28	Q9HCC9	887 aa		29.37	■■■□□ 2.29
CNOT7-204	ENST00000518885	HERC5	Q9UII4	1024 aa	Known RBP	29.37	■■■□□ 2.29
CNOT7-204	ENST00000518885	GPATCH3	Q96I76	525 aa		29.36	■■■□□ 2.29
CNOT7-204	ENST00000518885	DNAJC2	Q99543	621 aa	Known RBP	29.36	■■■□□ 2.29
CNOT7-204	ENST00000518885	PTPN18	Q99952	460 aa		29.36	■■■□□ 2.29
CNOT7-204	ENST00000518885	TRIM34	Q9BYJ4	488 aa		29.36	■■■□□ 2.29
CNOT7-204	ENST00000518885	PI4KB	Q9UBF8	816 aa		29.36	■■■□□ 2.29
CNOT7-204	ENST00000518885	PHF20L1	A8MW92	1017 aa		29.35	■■■□□ 2.29
CNOT7-204	ENST00000518885	ATP5J	P18859	108 aa		29.35	■■■□□ 2.29
CNOT7-204	ENST00000518885	CRHR2	Q13324	411 aa		29.35	■■■□□ 2.29
CNOT7-204	ENST00000518885	TGFBRAP1	Q8WUH2	860 aa		29.35	■■■□□ 2.29
CNOT7-204	ENST00000518885	DCTPP1	Q9H773	170 aa		29.35	■■■□□ 2.29
CNOT7-204	ENST00000518885	TAF1C	Q15572	869 aa	Predicted RBP	29.34	■■■□□ 2.29
CNOT7-204	ENST00000518885	ADGRA1	Q86SQ6	560 aa		29.34	■■■□□ 2.29
CNOT7-204	ENST00000518885	ANTXR1	Q9H6X2	564 aa		29.34	■■■□□ 2.29
CNOT7-204	ENST00000518885	KCNH4	Q9UQ05	1017 aa		29.34	■■■□□ 2.29
CNOT7-204	ENST00000518885	NDUFB9	Q9Y6M9	179 aa		29.34	■■■□□ 2.29
CNOT7-204	ENST00000518885	GOLIM4	O00461	696 aa		29.33	■■■□□ 2.29
CNOT7-204	ENST00000518885	CXCL11	O14625	94 aa		29.33	■■■□□ 2.29
CNOT7-204	ENST00000518885	HLA-DOA	P06340	250 aa		29.33	■■■□□ 2.29
CNOT7-204	ENST00000518885	ERO1A	Q96HE7	468 aa		29.33	■■■□□ 2.29
CNOT7-204	ENST00000518885	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	29.33	■■■□□ 2.29
CNOT7-204	ENST00000518885	FLT1	P17948	1338 aa		29.33	■■■□□ 2.29
CNOT7-204	ENST00000518885	USP5	P45974	858 aa		29.32	■■■□□ 2.28
CNOT7-204	ENST00000518885	AAMP	Q13685	434 aa		29.32	■■■□□ 2.28
CNOT7-204	ENST00000518885	ARHGEF6	Q15052	776 aa		29.32	■■■□□ 2.28
CNOT7-204	ENST00000518885	SLC9C2	Q5TAH2	1124 aa		29.32	■■■□□ 2.28
CNOT7-204	ENST00000518885	MAPKAPK5	Q8IW41	473 aa		29.32	■■■□□ 2.28
CNOT7-204	ENST00000518885	TBC1D2	Q9BYX2	928 aa		29.32	■■■□□ 2.28
CNOT7-204	ENST00000518885	PAG1	Q9NWQ8	432 aa		29.32	■■■□□ 2.28
CNOT7-204	ENST00000518885	MIGA1	Q8NAN2	632 aa		29.31	■■■□□ 2.28
CNOT7-204	ENST00000518885	PTPRA	P18433	802 aa		29.3	■■■□□ 2.28
CNOT7-204	ENST00000518885	FOXP4	Q8IVH2	680 aa	Predicted RBP	29.3	■■■□□ 2.28
CNOT7-204	ENST00000518885	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	29.3	■■■□□ 2.28
CNOT7-204	ENST00000518885	ZHX2	Q9Y6X8	837 aa		29.3	■■■□□ 2.28
CNOT7-204	ENST00000518885	CCDC85C	A6NKD9	419 aa		29.29	■■■□□ 2.28

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms