RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 NDUFB5O43674 189 aa5.78□□□□□ -1.48
PCM1-208ENST00000518877 PPP1R15AO75807 674 aaPredicted RBP5.78□□□□□ -1.48
PCM1-208ENST00000518877 FAAP100Q0VG06 881 aa5.78□□□□□ -1.48
PCM1-208ENST00000518877 PDE3BQ13370 1112 aa5.78□□□□□ -1.48
PCM1-208ENST00000518877 IKZF1Q13422 519 aa5.78□□□□□ -1.48
PCM1-208ENST00000518877 GLYCTKQ8IVS8 523 aa5.78□□□□□ -1.48
PCM1-208ENST00000518877 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.78□□□□□ -1.48
PCM1-208ENST00000518877 CCDC82Q8N4S0 544 aa5.78□□□□□ -1.48
PCM1-208ENST00000518877 FLAD1Q8NFF5 587 aa5.78□□□□□ -1.48
PCM1-208ENST00000518877 TUT1Q9H6E5 874 aaKnown RBP5.78□□□□□ -1.48
PCM1-208ENST00000518877 KRT82Q9NSB4 513 aa5.78□□□□□ -1.48
PCM1-208ENST00000518877 FAM53CQ9NYF3 392 aa5.78□□□□□ -1.48
PCM1-208ENST00000518877 TRAK1Q9UPV9 953 aa5.78□□□□□ -1.48
PCM1-208ENST00000518877 CARNS1A5YM72 827 aa5.77□□□□□ -1.49
PCM1-208ENST00000518877 RAP1GAPP47736 663 aa5.77□□□□□ -1.49
PCM1-208ENST00000518877 PPP2R3AQ06190 1150 aa5.77□□□□□ -1.49
PCM1-208ENST00000518877 MESP2Q0VG99 397 aa5.77□□□□□ -1.49
PCM1-208ENST00000518877 PRPF40BQ6NWY9 871 aaKnown RBP5.77□□□□□ -1.49
PCM1-208ENST00000518877 BHLHE22Q8NFJ8 381 aaPredicted RBP5.77□□□□□ -1.49
PCM1-208ENST00000518877 CCDC74AQ96AQ1 378 aa5.77□□□□□ -1.49
PCM1-208ENST00000518877 TOX2Q96NM4 488 aa5.77□□□□□ -1.49
PCM1-208ENST00000518877 KRTAP4-2Q9BYR5 136 aa5.77□□□□□ -1.49
PCM1-208ENST00000518877 C1orf115Q9H7X2 142 aa5.77□□□□□ -1.49
PCM1-208ENST00000518877 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.77□□□□□ -1.49
PCM1-208ENST00000518877 ICMTO60725 284 aa5.76□□□□□ -1.49
PCM1-208ENST00000518877 ZP2Q05996 745 aa5.76□□□□□ -1.49
PCM1-208ENST00000518877 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
PCM1-208ENST00000518877 DTHD1Q6ZMT9 781 aa5.76□□□□□ -1.49
PCM1-208ENST00000518877 TMC1Q8TDI8 760 aa5.76□□□□□ -1.49
PCM1-208ENST00000518877 ASB11Q8WXH4 323 aa5.76□□□□□ -1.49
PCM1-208ENST00000518877 ISL2Q96A47 359 aa5.76□□□□□ -1.49
PCM1-208ENST00000518877 GTF2IRD1Q9UHL9 959 aa5.76□□□□□ -1.49
PCM1-208ENST00000518877 PCDHGC5Q9Y5F6 944 aa5.76□□□□□ -1.49
PCM1-208ENST00000518877 SNX11Q9Y5W9 270 aa5.76□□□□□ -1.49
PCM1-208ENST00000518877 ZNF503-AS2A6NEH8 195 aa5.75□□□□□ -1.49
PCM1-208ENST00000518877 NEFMP07197 916 aa5.75□□□□□ -1.49
PCM1-208ENST00000518877 FCGRTP55899 365 aa5.75□□□□□ -1.49
PCM1-208ENST00000518877 ZSCAN18Q8TBC5 510 aaPredicted RBP5.75□□□□□ -1.49
PCM1-208ENST00000518877 TNKS2Q9H2K2 1166 aa5.75□□□□□ -1.49
PCM1-208ENST00000518877 EGFL7Q9UHF1 273 aa5.75□□□□□ -1.49
PCM1-208ENST00000518877 EIF1AYO14602 144 aaKnown RBP5.74□□□□□ -1.49
PCM1-208ENST00000518877 GRM2Q14416 872 aa5.74□□□□□ -1.49
PCM1-208ENST00000518877 MPZL3Q6UWV2 235 aa5.74□□□□□ -1.49
PCM1-208ENST00000518877 RNF214Q8ND24 703 aa5.74□□□□□ -1.49
PCM1-208ENST00000518877 ACSBG1Q96GR2 724 aa5.74□□□□□ -1.49
PCM1-208ENST00000518877 LIN37Q96GY3 246 aaPredicted RBP5.74□□□□□ -1.49
PCM1-208ENST00000518877 PPP1R16BQ96T49 567 aa5.74□□□□□ -1.49
PCM1-208ENST00000518877 DNAJC25Q9H1X3 360 aa5.74□□□□□ -1.49
PCM1-208ENST00000518877 PICK1Q9NRD5 415 aa5.74□□□□□ -1.49
PCM1-208ENST00000518877 TMEM39AQ9NV64 488 aa5.74□□□□□ -1.49
PCM1-208ENST00000518877 GTF3C3Q9Y5Q9 886 aa5.74□□□□□ -1.49
PCM1-208ENST00000518877 ZNF865P0CJ78 1059 aaPredicted RBP5.73□□□□□ -1.49
PCM1-208ENST00000518877 AFMP43652 599 aa5.73□□□□□ -1.49
PCM1-208ENST00000518877 SERPINB4P48594 390 aa5.73□□□□□ -1.49
PCM1-208ENST00000518877 ECM1Q16610 540 aa5.73□□□□□ -1.49
PCM1-208ENST00000518877 MAP1SQ66K74 1059 aaPredicted RBP5.73□□□□□ -1.49
PCM1-208ENST00000518877 SULF2Q8IWU5 870 aa5.73□□□□□ -1.49
PCM1-208ENST00000518877 HEXIM2Q96MH2 286 aaKnown RBP5.73□□□□□ -1.49
PCM1-208ENST00000518877 FAM129BQ96TA1 746 aa5.73□□□□□ -1.49
PCM1-208ENST00000518877 NIF3L1Q9GZT8 377 aa5.73□□□□□ -1.49
PCM1-208ENST00000518877 PPP4R2Q9NY27 417 aa5.73□□□□□ -1.49
PCM1-208ENST00000518877 GNAT3A8MTJ3 354 aa5.72□□□□□ -1.49
PCM1-208ENST00000518877 CFPP27918 469 aa5.72□□□□□ -1.49
PCM1-208ENST00000518877 ERVK-24P63145 666 aa5.72□□□□□ -1.49
PCM1-208ENST00000518877 SYDE1Q6ZW31 735 aaPredicted RBP5.72□□□□□ -1.49
PCM1-208ENST00000518877 PDZD3Q86UT5 571 aa5.72□□□□□ -1.49
PCM1-208ENST00000518877 CBX8Q9HC52 389 aa5.72□□□□□ -1.49
PCM1-208ENST00000518877 CTNND2Q9UQB3 1225 aa5.72□□□□□ -1.49
PCM1-208ENST00000518877 TSPAN15O95858 294 aa5.71□□□□□ -1.5
PCM1-208ENST00000518877 ARHGAP4P98171 946 aa5.71□□□□□ -1.5
PCM1-208ENST00000518877 ZC3H12AQ5D1E8 599 aaKnown RBP5.71□□□□□ -1.5
PCM1-208ENST00000518877 B4GALNT3Q6L9W6 998 aa5.71□□□□□ -1.5
PCM1-208ENST00000518877 ANKLE2Q86XL3 938 aa5.71□□□□□ -1.5
PCM1-208ENST00000518877 SPACA3Q8IXA5 215 aa5.71□□□□□ -1.5
PCM1-208ENST00000518877 LRRC56Q8IYG6 542 aaPredicted RBP5.71□□□□□ -1.5
PCM1-208ENST00000518877 EPS8L3Q8TE67 593 aaKnown RBP5.71□□□□□ -1.5
PCM1-208ENST00000518877 EMILIN2Q9BXX0 1053 aa5.71□□□□□ -1.5
PCM1-208ENST00000518877 PRDM10Q9NQV6 1147 aa5.71□□□□□ -1.5
PCM1-208ENST00000518877 NLRP2Q9NX02 1062 aa5.71□□□□□ -1.5
PCM1-208ENST00000518877 AKAP2Q9Y2D5 859 aa5.71□□□□□ -1.5
PCM1-208ENST00000518877 CSADQ9Y600 493 aa5.71□□□□□ -1.5
PCM1-208ENST00000518877 IGF2BP3O00425 579 aaKnown RBP eCLIP5.7□□□□□ -1.5
PCM1-208ENST00000518877 GPR182O15218 404 aa5.7□□□□□ -1.5
PCM1-208ENST00000518877 GLI1P08151 1106 aa5.7□□□□□ -1.5
PCM1-208ENST00000518877 ARNTP27540 789 aa5.7□□□□□ -1.5
PCM1-208ENST00000518877 PPM1JQ5JR12 505 aa5.7□□□□□ -1.5
PCM1-208ENST00000518877 FYB2Q5VWT5 728 aa5.7□□□□□ -1.5
PCM1-208ENST00000518877 PRR23BQ6ZRT6 265 aa5.7□□□□□ -1.5
PCM1-208ENST00000518877 STK35Q8TDR2 534 aa5.7□□□□□ -1.5
PCM1-208ENST00000518877 GPBAR1Q8TDU6 330 aa5.7□□□□□ -1.5
PCM1-208ENST00000518877 KIRREL1Q96J84 757 aa5.7□□□□□ -1.5
PCM1-208ENST00000518877 CITED4Q96RK1 184 aa5.7□□□□□ -1.5
PCM1-208ENST00000518877 NFIBO00712 420 aa5.69□□□□□ -1.5
PCM1-208ENST00000518877 ZSCAN22P10073 491 aaPredicted RBP5.69□□□□□ -1.5
PCM1-208ENST00000518877 XRCC5P13010 732 aaKnown RBP5.69□□□□□ -1.5
PCM1-208ENST00000518877 NME2P22392 152 aa5.69□□□□□ -1.5
PCM1-208ENST00000518877 CLCN7P51798 805 aa5.69□□□□□ -1.5
PCM1-208ENST00000518877 NKPD1Q17RQ9 610 aa5.69□□□□□ -1.5
PCM1-208ENST00000518877 TMEM67Q5HYA8 995 aa5.69□□□□□ -1.5
PCM1-208ENST00000518877 LILRA6Q6PI73 481 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms