RNA–Protein interactions for RNA: ENST00000518869.1

TMEM55A-203, humanhuman

TSL 5

Gene TMEM55A, Length 841 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-203ENST00000518869 ZNF296Q8WUU4 475 aaPredicted RBP16.16■□□□□ 0.18
TMEM55A-203ENST00000518869 EAF2Q96CJ1 260 aaPredicted RBP16.16■□□□□ 0.18
TMEM55A-203ENST00000518869 CCDC8Q9H0W5 538 aaPredicted RBP16.16■□□□□ 0.18
TMEM55A-203ENST00000518869 ZFYVE28Q9HCC9 887 aa16.16■□□□□ 0.18
TMEM55A-203ENST00000518869 PICK1Q9NRD5 415 aa16.16■□□□□ 0.18
TMEM55A-203ENST00000518869 ZNF112Q9UJU3 913 aa16.16■□□□□ 0.18
TMEM55A-203ENST00000518869 DBNLQ9UJU6 430 aaKnown RBP16.16■□□□□ 0.18
TMEM55A-203ENST00000518869 CCL15-CCL14A0A0B4J2E2 113 aa16.15■□□□□ 0.18
TMEM55A-203ENST00000518869 CCDC85CA6NKD9 419 aa16.15■□□□□ 0.18
TMEM55A-203ENST00000518869 MAP3K12Q12852 859 aa16.15■□□□□ 0.18
TMEM55A-203ENST00000518869 PICALMQ13492 652 aa16.15■□□□□ 0.18
TMEM55A-203ENST00000518869 CCL15Q16663 113 aa16.15■□□□□ 0.18
TMEM55A-203ENST00000518869 ZKSCAN4Q969J2 545 aaPredicted RBP16.15■□□□□ 0.18
TMEM55A-203ENST00000518869 DHX36Q9H2U1 1008 aaKnown RBP16.15■□□□□ 0.18
TMEM55A-203ENST00000518869 SNRKQ9NRH2 765 aa16.15■□□□□ 0.18
TMEM55A-203ENST00000518869 TBC1D12O60347 775 aa16.14■□□□□ 0.17
TMEM55A-203ENST00000518869 NOL9Q5SY16 702 aaKnown RBP16.14■□□□□ 0.17
TMEM55A-203ENST00000518869 PI16Q6UXB8 463 aa16.14■□□□□ 0.17
TMEM55A-203ENST00000518869 ERO1AQ96HE7 468 aa16.14■□□□□ 0.17
TMEM55A-203ENST00000518869 MS4A4AQ96JQ5 239 aa16.14■□□□□ 0.17
TMEM55A-203ENST00000518869 SNCAIPQ9Y6H5 919 aa16.14■□□□□ 0.17
TMEM55A-203ENST00000518869 CTNND1O60716 968 aaKnown RBP16.13■□□□□ 0.17
TMEM55A-203ENST00000518869 CYP2E1P05181 493 aaPredicted RBP16.13■□□□□ 0.17
TMEM55A-203ENST00000518869 GJA5P36382 358 aa16.13■□□□□ 0.17
TMEM55A-203ENST00000518869 PPP4CP60510 307 aa16.13■□□□□ 0.17
TMEM55A-203ENST00000518869 MAP3K10Q02779 954 aa16.13■□□□□ 0.17
TMEM55A-203ENST00000518869 TEX11Q8IYF3 940 aa16.13■□□□□ 0.17
TMEM55A-203ENST00000518869 IGF2BP3O00425 579 aaKnown RBP eCLIP16.12■□□□□ 0.17
TMEM55A-203ENST00000518869 CXCL11O14625 94 aa16.12■□□□□ 0.17
TMEM55A-203ENST00000518869 IRF6O14896 467 aa16.12■□□□□ 0.17
TMEM55A-203ENST00000518869 IDH1O75874 414 aaKnown RBP16.12■□□□□ 0.17
TMEM55A-203ENST00000518869 INPP5BP32019 993 aa16.12■□□□□ 0.17
TMEM55A-203ENST00000518869 ZAP70P43403 619 aa16.12■□□□□ 0.17
TMEM55A-203ENST00000518869 RHBDL3P58872 404 aa16.12■□□□□ 0.17
TMEM55A-203ENST00000518869 TAF1CQ15572 869 aaPredicted RBP16.12■□□□□ 0.17
TMEM55A-203ENST00000518869 SCYL3Q8IZE3 742 aa16.12■□□□□ 0.17
TMEM55A-203ENST00000518869 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.12■□□□□ 0.17
TMEM55A-203ENST00000518869 TRIM34Q9BYJ4 488 aa16.12■□□□□ 0.17
TMEM55A-203ENST00000518869 PI4KBQ9UBF8 816 aa16.12■□□□□ 0.17
TMEM55A-203ENST00000518869 APBB1O00213 710 aa16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 CYP7A1P22680 504 aa16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 SP3Q02447 781 aa16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 CRHR2Q13324 411 aa16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 KIF22Q14807 665 aa16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 FASTKD5Q7L8L6 764 aaKnown RBP16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 ZFPM1Q8IX07 1006 aa16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 PTPN18Q99952 460 aa16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 TBC1D2Q9BYX2 928 aa16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 OSBPL5Q9H0X9 879 aaPredicted RBP16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 IL1RAPL2Q9NP60 686 aa16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 AATFQ9NY61 560 aaKnown RBP eCLIP16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 HERC5Q9UII4 1024 aaKnown RBP16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 CASP8AP2Q9UKL3 1982 aa16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 ATRNL1Q5VV63 1379 aa16.11■□□□□ 0.17
TMEM55A-203ENST00000518869 MYH2Q9UKX2 1941 aa16.1■□□□□ 0.17
TMEM55A-203ENST00000518869 FBXO46Q6PJ61 603 aaPredicted RBP16.1■□□□□ 0.17
TMEM55A-203ENST00000518869 FOXP4Q8IVH2 680 aaPredicted RBP16.1■□□□□ 0.17
TMEM55A-203ENST00000518869 CNKSR2Q8WXI2 1034 aa16.1■□□□□ 0.17
TMEM55A-203ENST00000518869 BRI3BPQ8WY22 251 aa16.1■□□□□ 0.17
TMEM55A-203ENST00000518869 DDTLA6NHG4 134 aaPredicted RBP16.09■□□□□ 0.17
TMEM55A-203ENST00000518869 PHF20L1A8MW92 1017 aa16.09■□□□□ 0.17
TMEM55A-203ENST00000518869 HLA-DOAP06340 250 aa16.09■□□□□ 0.17
TMEM55A-203ENST00000518869 ZNF384Q8TF68 577 aa16.09■□□□□ 0.17
TMEM55A-203ENST00000518869 LRRCC1Q9C099 1032 aa16.09■□□□□ 0.17
TMEM55A-203ENST00000518869 DDX4Q9NQI0 724 aaKnown RBP16.09■□□□□ 0.17
TMEM55A-203ENST00000518869 TLR7Q9NYK1 1049 aaKnown RBP16.09■□□□□ 0.17
TMEM55A-203ENST00000518869 KCNH4Q9UQ05 1017 aa16.09■□□□□ 0.17
TMEM55A-203ENST00000518869 ZHX2Q9Y6X8 837 aa16.09■□□□□ 0.17
TMEM55A-203ENST00000518869 COL2A1P02458 1487 aaPredicted RBP16.09■□□□□ 0.17
TMEM55A-203ENST00000518869 AK9Q5TCS8 1911 aa16.08■□□□□ 0.16
TMEM55A-203ENST00000518869 SH3BP5LQ7L8J4 393 aa16.08■□□□□ 0.16
TMEM55A-203ENST00000518869 ANKRD23Q86SG2 305 aa16.08■□□□□ 0.16
TMEM55A-203ENST00000518869 SIRT2Q8IXJ6 389 aa16.08■□□□□ 0.16
TMEM55A-203ENST00000518869 CRACR2BQ8N4Y2 399 aaPredicted RBP16.08■□□□□ 0.16
TMEM55A-203ENST00000518869 MAGEB6Q8N7X4 407 aa16.08■□□□□ 0.16
TMEM55A-203ENST00000518869 SH3RF3Q8TEJ3 882 aaPredicted RBP16.08■□□□□ 0.16
TMEM55A-203ENST00000518869 TGFBRAP1Q8WUH2 860 aa16.08■□□□□ 0.16
TMEM55A-203ENST00000518869 GPATCH3Q96I76 525 aa16.08■□□□□ 0.16
TMEM55A-203ENST00000518869 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.08■□□□□ 0.16
TMEM55A-203ENST00000518869 PIH1D3Q9NQM4 214 aaKnown RBP16.08■□□□□ 0.16
TMEM55A-203ENST00000518869 RFX7Q2KHR2 1363 aa16.08■□□□□ 0.16
TMEM55A-203ENST00000518869 TLR2O60603 784 aa16.07■□□□□ 0.16
TMEM55A-203ENST00000518869 GNRH1P01148 92 aa16.07■□□□□ 0.16
TMEM55A-203ENST00000518869 PTPRAP18433 802 aa16.07■□□□□ 0.16
TMEM55A-203ENST00000518869 USP5P45974 858 aa16.07■□□□□ 0.16
TMEM55A-203ENST00000518869 FAM43AQ8N2R8 423 aa16.07■□□□□ 0.16
TMEM55A-203ENST00000518869 BCL11AQ9H165 835 aa16.07■□□□□ 0.16
TMEM55A-203ENST00000518869 EFCC1Q9HA90 598 aa16.07■□□□□ 0.16
TMEM55A-203ENST00000518869 AS3MTQ9HBK9 375 aa16.07■□□□□ 0.16
TMEM55A-203ENST00000518869 GINM1Q9NU53 330 aa16.07■□□□□ 0.16
TMEM55A-203ENST00000518869 ZBTB47Q9UFB7 747 aaPredicted RBP16.07■□□□□ 0.16
TMEM55A-203ENST00000518869 TRIM17Q9Y577 477 aa16.07■□□□□ 0.16
TMEM55A-203ENST00000518869 BTBD19C9JJ37 291 aa16.06■□□□□ 0.16
TMEM55A-203ENST00000518869 C20orf194Q5TEA3 1177 aa16.06■□□□□ 0.16
TMEM55A-203ENST00000518869 PARK7Q99497 189 aaKnown RBP16.06■□□□□ 0.16
TMEM55A-203ENST00000518869 R3HDMLQ9H3Y0 253 aa16.06■□□□□ 0.16
TMEM55A-203ENST00000518869 PDHXO00330 501 aa16.05■□□□□ 0.16
TMEM55A-203ENST00000518869 ATP5JP18859 108 aa16.05■□□□□ 0.16
TMEM55A-203ENST00000518869 SLC9C2Q5TAH2 1124 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms